RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 CTDSP1Q9GZU7 261 aa3.15□□□□□ -1.91
HPS3-205ENST00000478525 CHST12Q9NRB3 414 aa3.15□□□□□ -1.91
HPS3-205ENST00000478525 KLHL42Q9P2K6 505 aa3.15□□□□□ -1.91
HPS3-205ENST00000478525 NDRG3Q9UGV2 375 aa3.15□□□□□ -1.91
HPS3-205ENST00000478525 RALYQ9UKM9 306 aaKnown RBP3.15□□□□□ -1.91
HPS3-205ENST00000478525 NOTCH2Q04721 2471 aa3.15□□□□□ -1.91
HPS3-205ENST00000478525 CACNA1FO60840 1977 aa3.14□□□□□ -1.91
HPS3-205ENST00000478525 EBAG9O00559 213 aa3.14□□□□□ -1.91
HPS3-205ENST00000478525 FFAR2O15552 330 aa3.14□□□□□ -1.91
HPS3-205ENST00000478525 PLRG1O43660 514 aaKnown RBP3.14□□□□□ -1.91
HPS3-205ENST00000478525 PATE4P0C8F1 98 aa3.14□□□□□ -1.91
HPS3-205ENST00000478525 HNRNPH1P31943 449 aaKnown RBP3.14□□□□□ -1.91
HPS3-205ENST00000478525 PPM1AP35813 382 aa3.14□□□□□ -1.91
HPS3-205ENST00000478525 PPP6R3Q5H9R7 873 aaPredicted RBP3.14□□□□□ -1.91
HPS3-205ENST00000478525 ZNF484Q5JVG2 852 aa3.14□□□□□ -1.91
HPS3-205ENST00000478525 GFRALQ6UXV0 394 aa3.14□□□□□ -1.91
HPS3-205ENST00000478525 SPAG16Q8N0X2 631 aa3.14□□□□□ -1.91
HPS3-205ENST00000478525 METTL27Q8N6F8 245 aaPredicted RBP3.14□□□□□ -1.91
HPS3-205ENST00000478525 ADAD2Q8NCV1 583 aaKnown RBP3.14□□□□□ -1.91
HPS3-205ENST00000478525 CADM4Q8NFZ8 388 aa3.14□□□□□ -1.91
HPS3-205ENST00000478525 TMEM170AQ8WVE7 144 aa3.14□□□□□ -1.91
HPS3-205ENST00000478525 ZNF524Q96C55 264 aa3.14□□□□□ -1.91
HPS3-205ENST00000478525 C17orf77Q96MU5 243 aa3.14□□□□□ -1.91
HPS3-205ENST00000478525 ZNF583Q96ND8 569 aa3.14□□□□□ -1.91
HPS3-205ENST00000478525 TRAPPC9Q96Q05 1148 aa3.14□□□□□ -1.91
HPS3-205ENST00000478525 EGFL8Q99944 293 aa3.14□□□□□ -1.91
HPS3-205ENST00000478525 PLEKHA5Q9HAU0 1116 aa3.14□□□□□ -1.91
HPS3-205ENST00000478525 IFT80Q9P2H3 777 aaPredicted RBP3.14□□□□□ -1.91
HPS3-205ENST00000478525 KCNK7Q9Y2U2 307 aa3.14□□□□□ -1.91
HPS3-205ENST00000478525 ATXN2Q99700 1313 aaKnown RBP3.14□□□□□ -1.91
HPS3-205ENST00000478525 H0Y3Z8 333 aa3.13□□□□□ -1.91
HPS3-205ENST00000478525 TUBBP07437 444 aa3.13□□□□□ -1.91
HPS3-205ENST00000478525 SRD5A1P18405 259 aa3.13□□□□□ -1.91
HPS3-205ENST00000478525 NR1D1P20393 614 aa3.13□□□□□ -1.91
HPS3-205ENST00000478525 TUBB4BP68371 445 aa3.13□□□□□ -1.91
HPS3-205ENST00000478525 GALNT1Q10472 559 aaPredicted RBP3.13□□□□□ -1.91
HPS3-205ENST00000478525 PFKFB4Q16877 469 aa3.13□□□□□ -1.91
HPS3-205ENST00000478525 ESCO2Q56NI9 601 aa3.13□□□□□ -1.91
HPS3-205ENST00000478525 LCTLQ6UWM7 567 aa3.13□□□□□ -1.91
HPS3-205ENST00000478525 GTSCR1Q86UQ5 136 aa3.13□□□□□ -1.91
HPS3-205ENST00000478525 TMEM219Q86XT9 240 aa3.13□□□□□ -1.91
HPS3-205ENST00000478525 LURAP1LQ8IV03 231 aa3.13□□□□□ -1.91
HPS3-205ENST00000478525 CCDC117Q8IWD4 279 aaPredicted RBP3.13□□□□□ -1.91
HPS3-205ENST00000478525 LYG1Q8N1E2 194 aa3.13□□□□□ -1.91
HPS3-205ENST00000478525 SRBD1Q8N5C6 995 aaKnown RBP3.13□□□□□ -1.91
HPS3-205ENST00000478525 OR10V1Q8NGI7 309 aa3.13□□□□□ -1.91
HPS3-205ENST00000478525 KTI12Q96EK9 354 aaPredicted RBP3.13□□□□□ -1.91
HPS3-205ENST00000478525 MYD88Q99836 296 aa3.13□□□□□ -1.91
HPS3-205ENST00000478525 ENTPD7Q9NQZ7 604 aa3.13□□□□□ -1.91
HPS3-205ENST00000478525 CNPY2Q9Y2B0 182 aa3.13□□□□□ -1.91
HPS3-205ENST00000478525 KRTAP16-1A8MUX0 517 aa3.12□□□□□ -1.91
HPS3-205ENST00000478525 ITGA2P17301 1181 aa3.12□□□□□ -1.91
HPS3-205ENST00000478525 ITGAXP20702 1163 aa3.12□□□□□ -1.91
HPS3-205ENST00000478525 STX2P32856 288 aa3.12□□□□□ -1.91
HPS3-205ENST00000478525 DRG2P55039 364 aaKnown RBP3.12□□□□□ -1.91
HPS3-205ENST00000478525 SMAD1Q15797 465 aaKnown RBP3.12□□□□□ -1.91
HPS3-205ENST00000478525 STXBP5Q5T5C0 1151 aa3.12□□□□□ -1.91
HPS3-205ENST00000478525 SULT6B1Q6IMI4 303 aa3.12□□□□□ -1.91
HPS3-205ENST00000478525 CES5AQ6NT32 575 aa3.12□□□□□ -1.91
HPS3-205ENST00000478525 SUSD1Q6UWL2 747 aa3.12□□□□□ -1.91
HPS3-205ENST00000478525 B3GNT6Q6ZMB0 384 aa3.12□□□□□ -1.91
HPS3-205ENST00000478525 PARP16Q8N5Y8 322 aa3.12□□□□□ -1.91
HPS3-205ENST00000478525 ZNF527Q8NB42 609 aa3.12□□□□□ -1.91
HPS3-205ENST00000478525 DNAAF1Q8NEP3 725 aa3.12□□□□□ -1.91
HPS3-205ENST00000478525 KLHDC9Q8NEP7 349 aa3.12□□□□□ -1.91
HPS3-205ENST00000478525 SLC20A1Q8WUM9 679 aa3.12□□□□□ -1.91
HPS3-205ENST00000478525 OTULINQ96BN8 352 aa3.12□□□□□ -1.91
HPS3-205ENST00000478525 ATOH8Q96SQ7 321 aa3.12□□□□□ -1.91
HPS3-205ENST00000478525 NPLQ9BXD5 320 aaPredicted RBP3.12□□□□□ -1.91
HPS3-205ENST00000478525 PDS5AQ29RF7 1337 aaKnown RBP3.12□□□□□ -1.91
HPS3-205ENST00000478525 HSPB2A8KAH6 182 aa3.11□□□□□ -1.91
HPS3-205ENST00000478525 SEPT4O43236 478 aa3.11□□□□□ -1.91
HPS3-205ENST00000478525 NDUFB4O95168 129 aa3.11□□□□□ -1.91
HPS3-205ENST00000478525 PDIA3P30101 505 aaKnown RBP3.11□□□□□ -1.91
HPS3-205ENST00000478525 RYKP34925 604 aa3.11□□□□□ -1.91
HPS3-205ENST00000478525 SERPINF1P36955 418 aa3.11□□□□□ -1.91
HPS3-205ENST00000478525 HSPB2Q16082 182 aa3.11□□□□□ -1.91
HPS3-205ENST00000478525 SOWAHAQ2M3V2 549 aa3.11□□□□□ -1.91
HPS3-205ENST00000478525 SRLQ86TD4 932 aa3.11□□□□□ -1.91
HPS3-205ENST00000478525 CHD1LQ86WJ1 897 aa3.11□□□□□ -1.91
HPS3-205ENST00000478525 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.11□□□□□ -1.91
HPS3-205ENST00000478525 LINS1Q8NG48 757 aa3.11□□□□□ -1.91
HPS3-205ENST00000478525 GDPD5Q8WTR4 605 aa3.11□□□□□ -1.91
HPS3-205ENST00000478525 RND1Q92730 232 aa3.11□□□□□ -1.91
HPS3-205ENST00000478525 FSD1Q9BTV5 496 aa3.11□□□□□ -1.91
HPS3-205ENST00000478525 C17orf75Q9HAS0 396 aa3.11□□□□□ -1.91
HPS3-205ENST00000478525 G6PC2Q9NQR9 355 aa3.11□□□□□ -1.91
HPS3-205ENST00000478525 HCFC1R1Q9NWW0 138 aa3.11□□□□□ -1.91
HPS3-205ENST00000478525 TINAGQ9UJW2 476 aa3.11□□□□□ -1.91
HPS3-205ENST00000478525 ADGRF5Q8IZF2 1346 aa3.11□□□□□ -1.91
HPS3-205ENST00000478525 A0A087WV62 115 aa3.1□□□□□ -1.91
HPS3-205ENST00000478525 A0A0U1RQF3 1178 aa3.1□□□□□ -1.91
HPS3-205ENST00000478525 TYW5A2RUC4 315 aaKnown RBP3.1□□□□□ -1.91
HPS3-205ENST00000478525 CBY3A6NI87 242 aa3.1□□□□□ -1.91
HPS3-205ENST00000478525 E7EVH7 732 aa3.1□□□□□ -1.91
HPS3-205ENST00000478525 ACKR2O00590 384 aa3.1□□□□□ -1.91
HPS3-205ENST00000478525 KRT38O76015 456 aa3.1□□□□□ -1.91
HPS3-205ENST00000478525 WEE2P0C1S8 567 aa3.1□□□□□ -1.91
HPS3-205ENST00000478525 NBPF7P0C2Y1 421 aaPredicted RBP3.1□□□□□ -1.91
HPS3-205ENST00000478525 PAX1P15863 534 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms