RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 KIAA1522Q9P206 1035 aaPredicted RBP14.29□□□□□ -0.12
NPHP4-208ENST00000478423 hCG_2014768A0A024R1R8 64 aa14.28□□□□□ -0.12
NPHP4-208ENST00000478423 A0A0U1RQF3 1178 aa14.28□□□□□ -0.12
NPHP4-208ENST00000478423 PRMT5O14744 637 aaPredicted RBP14.28□□□□□ -0.12
NPHP4-208ENST00000478423 METTL18O95568 372 aa14.28□□□□□ -0.12
NPHP4-208ENST00000478423 LDLRP01130 860 aa14.28□□□□□ -0.12
NPHP4-208ENST00000478423 COX4I1P13073 169 aa14.28□□□□□ -0.12
NPHP4-208ENST00000478423 INSCQ1MX18 579 aa14.28□□□□□ -0.12
NPHP4-208ENST00000478423 PREPLQ4J6C6 727 aaPredicted RBP14.28□□□□□ -0.12
NPHP4-208ENST00000478423 PPP4R4Q6NUP7 873 aa14.28□□□□□ -0.12
NPHP4-208ENST00000478423 SLC30A9Q6PML9 568 aa14.28□□□□□ -0.12
NPHP4-208ENST00000478423 SYT12Q8IV01 421 aa14.28□□□□□ -0.12
NPHP4-208ENST00000478423 PLD3Q8IV08 490 aa14.28□□□□□ -0.12
NPHP4-208ENST00000478423 RTL3Q8N8U3 475 aaKnown RBP14.28□□□□□ -0.12
NPHP4-208ENST00000478423 CSGALNACT1Q8TDX6 532 aa14.28□□□□□ -0.12
NPHP4-208ENST00000478423 GDPD5Q8WTR4 605 aa14.28□□□□□ -0.12
NPHP4-208ENST00000478423 RHOBTB2Q9BYZ6 727 aa14.28□□□□□ -0.12
NPHP4-208ENST00000478423 ZNHIT2Q9UHR6 403 aa14.28□□□□□ -0.12
NPHP4-208ENST00000478423 PCDHGC4Q9Y5F7 938 aa14.28□□□□□ -0.12
NPHP4-208ENST00000478423 FAM182AQ5T1J6 154 aa14.28□□□□□ -0.12
NPHP4-208ENST00000478423 TAS1R3Q7RTX0 852 aa14.28□□□□□ -0.12
NPHP4-208ENST00000478423 LMO3Q8TAP4 145 aa14.28□□□□□ -0.12
NPHP4-208ENST00000478423 TEKT5Q96M29 485 aa14.28□□□□□ -0.12
NPHP4-208ENST00000478423 BCO2Q9BYV7 579 aa14.28□□□□□ -0.12
NPHP4-208ENST00000478423 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.28□□□□□ -0.12
NPHP4-208ENST00000478423 RABGEF1Q9UJ41 708 aa14.28□□□□□ -0.12
NPHP4-208ENST00000478423 RAI2Q9Y5P3 530 aa14.28□□□□□ -0.12
NPHP4-208ENST00000478423 MYH10P35580 1976 aa14.28□□□□□ -0.12
NPHP4-208ENST00000478423 DOT1LQ8TEK3 1739 aa14.28□□□□□ -0.12
NPHP4-208ENST00000478423 A0A1B0GVM2 712 aa14.28□□□□□ -0.12
NPHP4-208ENST00000478423 RGSL1A5PLK6 1076 aa14.28□□□□□ -0.12
NPHP4-208ENST00000478423 TCAF2A6NFQ2 919 aa14.28□□□□□ -0.12
NPHP4-208ENST00000478423 EFCAB14O75071 495 aa14.28□□□□□ -0.12
NPHP4-208ENST00000478423 SNRPB2P08579 225 aaKnown RBP14.28□□□□□ -0.12
NPHP4-208ENST00000478423 OGDHQ02218 1023 aa14.28□□□□□ -0.12
NPHP4-208ENST00000478423 CPSF6Q16630 551 aaKnown RBP eCLIP14.28□□□□□ -0.12
NPHP4-208ENST00000478423 TMEM63BQ5T3F8 832 aa14.28□□□□□ -0.12
NPHP4-208ENST00000478423 ESRP1Q6NXG1 681 aaKnown RBP14.28□□□□□ -0.12
NPHP4-208ENST00000478423 FBXO22Q8NEZ5 403 aa14.28□□□□□ -0.12
NPHP4-208ENST00000478423 AGAP11Q8TF27 550 aa14.28□□□□□ -0.12
NPHP4-208ENST00000478423 B3GALT6Q96L58 329 aa14.28□□□□□ -0.12
NPHP4-208ENST00000478423 BDH2Q9BUT1 245 aa14.28□□□□□ -0.12
NPHP4-208ENST00000478423 WDR55Q9H6Y2 383 aaPredicted RBP14.28□□□□□ -0.12
NPHP4-208ENST00000478423 ZFP14Q9HCL3 533 aa14.28□□□□□ -0.12
NPHP4-208ENST00000478423 ZDHHC18Q9NUE0 388 aa14.28□□□□□ -0.12
NPHP4-208ENST00000478423 LRCH1Q9Y2L9 728 aa14.28□□□□□ -0.12
NPHP4-208ENST00000478423 KIAA0100Q14667 2235 aaKnown RBP14.27□□□□□ -0.12
NPHP4-208ENST00000478423 NEDD8-MDP1E9PL57 170 aa14.27□□□□□ -0.12
NPHP4-208ENST00000478423 HCRTO43612 131 aa14.27□□□□□ -0.12
NPHP4-208ENST00000478423 GPR1P46091 355 aa14.27□□□□□ -0.12
NPHP4-208ENST00000478423 GRM3Q14832 879 aa14.27□□□□□ -0.12
NPHP4-208ENST00000478423 CCDC85BQ15834 202 aaPredicted RBP14.27□□□□□ -0.12
NPHP4-208ENST00000478423 RAET1GQ6H3X3 334 aa14.27□□□□□ -0.12
NPHP4-208ENST00000478423 ZFP1Q6P2D0 407 aa14.27□□□□□ -0.12
NPHP4-208ENST00000478423 STK32CQ86UX6 486 aa14.27□□□□□ -0.12
NPHP4-208ENST00000478423 RBFAQ8N0V3 343 aa14.27□□□□□ -0.12
NPHP4-208ENST00000478423 B4GALNT2Q8NHY0 566 aa14.27□□□□□ -0.12
NPHP4-208ENST00000478423 PSMG2Q969U7 264 aa14.27□□□□□ -0.12
NPHP4-208ENST00000478423 PIGVQ9NUD9 493 aa14.27□□□□□ -0.12
NPHP4-208ENST00000478423 COPG2Q9UBF2 871 aa14.27□□□□□ -0.12
NPHP4-208ENST00000478423 SRRDQ9UH36 339 aa14.27□□□□□ -0.12
NPHP4-208ENST00000478423 EVLQ9UI08 416 aaPredicted RBP14.27□□□□□ -0.12
NPHP4-208ENST00000478423 SUFUQ9UMX1 484 aa14.27□□□□□ -0.12
NPHP4-208ENST00000478423 Q9Y3F1 56 aa14.27□□□□□ -0.12
NPHP4-208ENST00000478423 AZIN1O14977 448 aa14.27□□□□□ -0.12
NPHP4-208ENST00000478423 IFNA14P01570 189 aa14.27□□□□□ -0.12
NPHP4-208ENST00000478423 RPN2P04844 631 aa14.27□□□□□ -0.12
NPHP4-208ENST00000478423 SERPINA6P08185 405 aa14.27□□□□□ -0.12
NPHP4-208ENST00000478423 PURAQ00577 322 aaKnown RBP14.27□□□□□ -0.12
NPHP4-208ENST00000478423 OASLQ15646 514 aaKnown RBP14.27□□□□□ -0.12
NPHP4-208ENST00000478423 MTSS1LQ765P7 747 aa14.27□□□□□ -0.12
NPHP4-208ENST00000478423 ANKS1BQ7Z6G8 1248 aa14.27□□□□□ -0.12
NPHP4-208ENST00000478423 CLYBLQ8N0X4 340 aa14.27□□□□□ -0.12
NPHP4-208ENST00000478423 TLCD1Q96CP7 247 aa14.27□□□□□ -0.12
NPHP4-208ENST00000478423 MAGED4Q96JG8 741 aa14.27□□□□□ -0.12
NPHP4-208ENST00000478423 ZFYVE1Q9HBF4 777 aa14.27□□□□□ -0.12
NPHP4-208ENST00000478423 IRAK2O43187 625 aa14.27□□□□□ -0.13
NPHP4-208ENST00000478423 TBX18O95935 607 aa14.27□□□□□ -0.13
NPHP4-208ENST00000478423 UGT2B4P06133 528 aa14.27□□□□□ -0.13
NPHP4-208ENST00000478423 IGFBP4P22692 258 aa14.27□□□□□ -0.13
NPHP4-208ENST00000478423 SEMA5AQ13591 1074 aa14.27□□□□□ -0.13
NPHP4-208ENST00000478423 GPRIN3Q6ZVF9 776 aa14.27□□□□□ -0.13
NPHP4-208ENST00000478423 ADCK1Q86TW2 530 aa14.27□□□□□ -0.13
NPHP4-208ENST00000478423 CHPFQ8IZ52 775 aa14.27□□□□□ -0.13
NPHP4-208ENST00000478423 SLC35F5Q8WV83 523 aa14.27□□□□□ -0.13
NPHP4-208ENST00000478423 HMCESQ96FZ2 354 aa14.27□□□□□ -0.13
NPHP4-208ENST00000478423 TMEM79Q9BSE2 394 aa14.27□□□□□ -0.13
NPHP4-208ENST00000478423 ACSS2Q9NR19 701 aa14.27□□□□□ -0.13
NPHP4-208ENST00000478423 FBXO10Q9UK96 956 aa14.27□□□□□ -0.13
NPHP4-208ENST00000478423 C15orf41Q9Y2V0 281 aa14.27□□□□□ -0.13
NPHP4-208ENST00000478423 MYH13Q9UKX3 1938 aa14.27□□□□□ -0.13
NPHP4-208ENST00000478423 C5P01031 1676 aa14.27□□□□□ -0.13
NPHP4-208ENST00000478423 PRR5-ARHGAP8B1AHC4 643 aa14.27□□□□□ -0.13
NPHP4-208ENST00000478423 SMNDC1O75940 238 aaKnown RBP eCLIP14.27□□□□□ -0.13
NPHP4-208ENST00000478423 PSMG1O95456 288 aa14.27□□□□□ -0.13
NPHP4-208ENST00000478423 CLPTM1O96005 669 aa14.27□□□□□ -0.13
NPHP4-208ENST00000478423 PKMP14618 531 aaKnown RBP14.27□□□□□ -0.13
NPHP4-208ENST00000478423 LIMK2P53671 638 aa14.27□□□□□ -0.13
NPHP4-208ENST00000478423 ARHGAP8P85298 464 aa14.27□□□□□ -0.13
NPHP4-208ENST00000478423 TGM3Q08188 693 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms