RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 BRAT1Q6PJG6 821 aa10.35□□□□□ -0.75
HDAC6-222ENST00000478095 ADAT2Q7Z6V5 191 aaKnown RBP10.35□□□□□ -0.75
HDAC6-222ENST00000478095 PRPF39Q86UA1 669 aaKnown RBP10.35□□□□□ -0.75
HDAC6-222ENST00000478095 REXO1L1PQ8IX06 675 aa10.35□□□□□ -0.75
HDAC6-222ENST00000478095 ABCA7Q8IZY2 2146 aa10.35□□□□□ -0.75
HDAC6-222ENST00000478095 TRIM58Q8NG06 486 aa10.35□□□□□ -0.75
HDAC6-222ENST00000478095 OR2I1PQ8NGU4 316 aa10.35□□□□□ -0.75
HDAC6-222ENST00000478095 C1orf216Q8TAB5 229 aa10.35□□□□□ -0.75
HDAC6-222ENST00000478095 CEP76Q8TAP6 659 aa10.35□□□□□ -0.75
HDAC6-222ENST00000478095 ARRDC2Q8TBH0 407 aa10.35□□□□□ -0.75
HDAC6-222ENST00000478095 RAB7BQ96AH8 199 aa10.35□□□□□ -0.75
HDAC6-222ENST00000478095 ECHDC3Q96DC8 303 aa10.35□□□□□ -0.75
HDAC6-222ENST00000478095 EDEM2Q9BV94 578 aa10.35□□□□□ -0.75
HDAC6-222ENST00000478095 GTPBP2Q9BX10 602 aaKnown RBP10.35□□□□□ -0.75
HDAC6-222ENST00000478095 NUSAP1Q9BXS6 441 aaKnown RBP10.35□□□□□ -0.75
HDAC6-222ENST00000478095 BRD8Q9H0E9 1235 aa10.35□□□□□ -0.75
HDAC6-222ENST00000478095 PYCARDQ9ULZ3 195 aa10.35□□□□□ -0.75
HDAC6-222ENST00000478095 SLC6A14Q9UN76 642 aa10.35□□□□□ -0.75
HDAC6-222ENST00000478095 EFR3BQ9Y2G0 817 aa10.35□□□□□ -0.75
HDAC6-222ENST00000478095 ATP8A1Q9Y2Q0 1164 aa10.35□□□□□ -0.75
HDAC6-222ENST00000478095 PCDHB9Q9Y5E1 797 aa10.35□□□□□ -0.75
HDAC6-222ENST00000478095 RAI2Q9Y5P3 530 aa10.35□□□□□ -0.75
HDAC6-222ENST00000478095 CHD5Q8TDI0 1954 aa10.35□□□□□ -0.75
HDAC6-222ENST00000478095 FRYLO94915 3013 aa10.34□□□□□ -0.75
HDAC6-222ENST00000478095 EP300Q09472 2414 aaPredicted RBP10.34□□□□□ -0.75
HDAC6-222ENST00000478095 IGLON5A6NGN9 336 aa10.34□□□□□ -0.75
HDAC6-222ENST00000478095 ENC1O14682 589 aa10.34□□□□□ -0.75
HDAC6-222ENST00000478095 ZSCAN12O43309 604 aa10.34□□□□□ -0.75
HDAC6-222ENST00000478095 HTRA2O43464 458 aaPredicted RBP10.34□□□□□ -0.75
HDAC6-222ENST00000478095 TSPAN6O43657 245 aa10.34□□□□□ -0.75
HDAC6-222ENST00000478095 SOCS5O75159 536 aa10.34□□□□□ -0.75
HDAC6-222ENST00000478095 MMP2P08253 660 aa10.34□□□□□ -0.75
HDAC6-222ENST00000478095 PDHA1P08559 390 aa10.34□□□□□ -0.75
HDAC6-222ENST00000478095 SERPINF2P08697 491 aa10.34□□□□□ -0.75
HDAC6-222ENST00000478095 ENGP17813 658 aa10.34□□□□□ -0.75
HDAC6-222ENST00000478095 RBL1P28749 1068 aa10.34□□□□□ -0.75
HDAC6-222ENST00000478095 CD86P42081 329 aa10.34□□□□□ -0.75
HDAC6-222ENST00000478095 AFF3P51826 1226 aaKnown RBP10.34□□□□□ -0.75
HDAC6-222ENST00000478095 CLDN2P57739 230 aa10.34□□□□□ -0.75
HDAC6-222ENST00000478095 EIF3EP60228 445 aaKnown RBP10.34□□□□□ -0.75
HDAC6-222ENST00000478095 RPS21P63220 83 aaKnown RBP10.34□□□□□ -0.75
HDAC6-222ENST00000478095 FAM193AP78312 1265 aa10.34□□□□□ -0.75
HDAC6-222ENST00000478095 WASHC5Q12768 1159 aa10.34□□□□□ -0.75
HDAC6-222ENST00000478095 GRIK2Q13002 908 aa10.34□□□□□ -0.75
HDAC6-222ENST00000478095 PTPRRQ15256 657 aa10.34□□□□□ -0.75
HDAC6-222ENST00000478095 TMEM259Q4ZIN3 620 aa10.34□□□□□ -0.75
HDAC6-222ENST00000478095 SETMARQ53H47 684 aaPredicted RBP10.34□□□□□ -0.75
HDAC6-222ENST00000478095 SLC45A4Q5BKX6 768 aa10.34□□□□□ -0.75
HDAC6-222ENST00000478095 ALG1LQ6GMV1 187 aa10.34□□□□□ -0.75
HDAC6-222ENST00000478095 NAPEPLDQ6IQ20 393 aa10.34□□□□□ -0.75
HDAC6-222ENST00000478095 KIAA1161Q6NSJ0 714 aa10.34□□□□□ -0.75
HDAC6-222ENST00000478095 ERAP2Q6P179 960 aa10.34□□□□□ -0.75
HDAC6-222ENST00000478095 NEK5Q6P3R8 708 aa10.34□□□□□ -0.75
HDAC6-222ENST00000478095 THSD4Q6ZMP0 1018 aa10.34□□□□□ -0.75
HDAC6-222ENST00000478095 KDM7AQ6ZMT4 941 aa10.34□□□□□ -0.75
HDAC6-222ENST00000478095 RABEPKQ7Z6M1 372 aa10.34□□□□□ -0.75
HDAC6-222ENST00000478095 GPR161Q8N6U8 529 aaKnown RBP10.34□□□□□ -0.75
HDAC6-222ENST00000478095 HCAR2Q8TDS4 363 aa10.34□□□□□ -0.75
HDAC6-222ENST00000478095 CXorf40AQ8TE69 158 aa10.34□□□□□ -0.75
HDAC6-222ENST00000478095 HTR3CQ8WXA8 447 aa10.34□□□□□ -0.75
HDAC6-222ENST00000478095 FEM1CQ96JP0 617 aa10.34□□□□□ -0.75
HDAC6-222ENST00000478095 SMIM14Q96QK8 99 aa10.34□□□□□ -0.75
HDAC6-222ENST00000478095 RBM15Q96T37 977 aaKnown RBP eCLIP10.34□□□□□ -0.75
HDAC6-222ENST00000478095 TLR10Q9BXR5 811 aa10.34□□□□□ -0.75
HDAC6-222ENST00000478095 TDRD1Q9BXT4 1180 aaKnown RBP10.34□□□□□ -0.75
HDAC6-222ENST00000478095 CAPN10Q9HC96 672 aa10.34□□□□□ -0.75
HDAC6-222ENST00000478095 NPDC1Q9NQX5 325 aaPredicted RBP10.34□□□□□ -0.75
HDAC6-222ENST00000478095 HAUS2Q9NVX0 235 aa10.34□□□□□ -0.75
HDAC6-222ENST00000478095 KLHL8Q9P2G9 620 aaPredicted RBP10.34□□□□□ -0.75
HDAC6-222ENST00000478095 AMACRQ9UHK6 382 aa10.34□□□□□ -0.75
HDAC6-222ENST00000478095 R3HDM2Q9Y2K5 976 aaKnown RBP10.34□□□□□ -0.75
HDAC6-222ENST00000478095 COQ6Q9Y2Z9 468 aa10.34□□□□□ -0.75
HDAC6-222ENST00000478095 NUMA1Q14980 2115 aa10.34□□□□□ -0.75
HDAC6-222ENST00000478095 PIEZO1Q92508 2521 aa10.33□□□□□ -0.76
HDAC6-222ENST00000478095 A0A0U1RQS6 177 aa10.33□□□□□ -0.76
HDAC6-222ENST00000478095 GOLGA6L9A6NEM1 432 aa10.33□□□□□ -0.76
HDAC6-222ENST00000478095 HACD1B0YJ81 288 aa10.33□□□□□ -0.76
HDAC6-222ENST00000478095 PRR5-ARHGAP8B1AHC4 643 aa10.33□□□□□ -0.76
HDAC6-222ENST00000478095 H0Y8X5 98 aa10.33□□□□□ -0.76
HDAC6-222ENST00000478095 RAD51BO15315 384 aa10.33□□□□□ -0.76
HDAC6-222ENST00000478095 PGLSO95336 258 aa10.33□□□□□ -0.76
HDAC6-222ENST00000478095 PAK4O96013 591 aaPredicted RBP10.33□□□□□ -0.76
HDAC6-222ENST00000478095 WNT1P04628 370 aa10.33□□□□□ -0.76
HDAC6-222ENST00000478095 ALPIP09923 528 aa10.33□□□□□ -0.76
HDAC6-222ENST00000478095 RBP3P10745 1247 aa10.33□□□□□ -0.76
HDAC6-222ENST00000478095 CTPS1P17812 591 aa10.33□□□□□ -0.76
HDAC6-222ENST00000478095 NFKB1P19838 968 aa10.33□□□□□ -0.76
HDAC6-222ENST00000478095 CXCR5P32302 372 aa10.33□□□□□ -0.76
HDAC6-222ENST00000478095 MMP12P39900 470 aa10.33□□□□□ -0.76
HDAC6-222ENST00000478095 ATXN3P54252 364 aaPredicted RBP10.33□□□□□ -0.76
HDAC6-222ENST00000478095 RACK1P63244 317 aaKnown RBP10.33□□□□□ -0.76
HDAC6-222ENST00000478095 SKOR1P84550 965 aa10.33□□□□□ -0.76
HDAC6-222ENST00000478095 BNC1Q01954 994 aa10.33□□□□□ -0.76
HDAC6-222ENST00000478095 LMNB2Q03252 620 aa10.33□□□□□ -0.76
HDAC6-222ENST00000478095 ELP6Q0PNE2 266 aa10.33□□□□□ -0.76
HDAC6-222ENST00000478095 SGCGQ13326 291 aa10.33□□□□□ -0.76
HDAC6-222ENST00000478095 KLF1Q13351 362 aaPredicted RBP10.33□□□□□ -0.76
HDAC6-222ENST00000478095 XRCC4Q13426 336 aa10.33□□□□□ -0.76
HDAC6-222ENST00000478095 PCSK7Q16549 785 aa10.33□□□□□ -0.76
HDAC6-222ENST00000478095 TEX44Q53QW1 395 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms