RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 RIPOR2Q9Y4F9 1068 aa4.35□□□□□ -1.71
UBR3-209ENST00000477461 SLC4A4Q9Y6R1 1079 aa4.35□□□□□ -1.71
UBR3-209ENST00000477461 CEMIPQ8WUJ3 1361 aa4.35□□□□□ -1.71
UBR3-209ENST00000477461 RGS12O14924 1447 aa4.35□□□□□ -1.71
UBR3-209ENST00000477461 KDM6AO15550 1401 aaPredicted RBP4.35□□□□□ -1.71
UBR3-209ENST00000477461 ADAMTS7Q9UKP4 1686 aa4.35□□□□□ -1.71
UBR3-209ENST00000477461 SIPA1L3O60292 1781 aaPredicted RBP4.35□□□□□ -1.71
UBR3-209ENST00000477461 SAC3D1A6NKF1 404 aa4.34□□□□□ -1.71
UBR3-209ENST00000477461 CHL1O00533 1208 aa4.34□□□□□ -1.71
UBR3-209ENST00000477461 LINC01565O15544 149 aa4.34□□□□□ -1.71
UBR3-209ENST00000477461 TPD52L2O43399 206 aaKnown RBP4.34□□□□□ -1.71
UBR3-209ENST00000477461 LDB3O75112 727 aa4.34□□□□□ -1.71
UBR3-209ENST00000477461 FCGR1AP12314 374 aa4.34□□□□□ -1.71
UBR3-209ENST00000477461 GYS1P13807 737 aa4.34□□□□□ -1.71
UBR3-209ENST00000477461 ZNF12P17014 697 aa4.34□□□□□ -1.71
UBR3-209ENST00000477461 THPOP40225 353 aa4.34□□□□□ -1.71
UBR3-209ENST00000477461 RCAN1P53805 252 aa4.34□□□□□ -1.71
UBR3-209ENST00000477461 ARL4CP56559 192 aa4.34□□□□□ -1.71
UBR3-209ENST00000477461 PRKG1Q13976 671 aa4.34□□□□□ -1.71
UBR3-209ENST00000477461 C9orf57Q5W0N0 161 aa4.34□□□□□ -1.71
UBR3-209ENST00000477461 DGAT2L7PQ6IED9 249 aa4.34□□□□□ -1.71
UBR3-209ENST00000477461 CREB3L2Q70SY1 520 aa4.34□□□□□ -1.71
UBR3-209ENST00000477461 CLIP4Q8N3C7 705 aa4.34□□□□□ -1.71
UBR3-209ENST00000477461 OR14A16Q8NHC5 309 aa4.34□□□□□ -1.71
UBR3-209ENST00000477461 MORC4Q8TE76 937 aa4.34□□□□□ -1.71
UBR3-209ENST00000477461 THAP4Q8WY91 577 aa4.34□□□□□ -1.71
UBR3-209ENST00000477461 C1QTNF4Q9BXJ3 329 aa4.34□□□□□ -1.71
UBR3-209ENST00000477461 CHMP4AQ9BY43 222 aa4.34□□□□□ -1.71
UBR3-209ENST00000477461 RETREG1Q9H6L5 497 aa4.34□□□□□ -1.71
UBR3-209ENST00000477461 G6PC2Q9NQR9 355 aa4.34□□□□□ -1.71
UBR3-209ENST00000477461 MIS18AQ9NYP9 233 aa4.34□□□□□ -1.71
UBR3-209ENST00000477461 SLC25A13Q9UJS0 675 aa4.34□□□□□ -1.71
UBR3-209ENST00000477461 PKP3Q9Y446 797 aa4.34□□□□□ -1.71
UBR3-209ENST00000477461 FANCIQ9NVI1 1328 aa4.34□□□□□ -1.71
UBR3-209ENST00000477461 MRC1P22897 1456 aa4.34□□□□□ -1.71
UBR3-209ENST00000477461 NHSQ6T4R5 1651 aa4.34□□□□□ -1.71
UBR3-209ENST00000477461 TOGARAM1Q9Y4F4 1720 aa4.34□□□□□ -1.71
UBR3-209ENST00000477461 KDM3BQ7LBC6 1761 aa4.34□□□□□ -1.71
UBR3-209ENST00000477461 SBF2Q86WG5 1849 aa4.34□□□□□ -1.71
UBR3-209ENST00000477461 KIF26BQ2KJY2 2108 aa4.33□□□□□ -1.72
UBR3-209ENST00000477461 BTAF1O14981 1849 aa4.33□□□□□ -1.72
UBR3-209ENST00000477461 BCL9O00512 1426 aa4.33□□□□□ -1.72
UBR3-209ENST00000477461 DENND3A2RUS2 1198 aa4.33□□□□□ -1.72
UBR3-209ENST00000477461 FAM90A20PA6NIJ5 464 aa4.33□□□□□ -1.72
UBR3-209ENST00000477461 SMTNL1A8MU46 457 aa4.33□□□□□ -1.72
UBR3-209ENST00000477461 H0Y3Z8 333 aa4.33□□□□□ -1.72
UBR3-209ENST00000477461 VWA5AO00534 786 aa4.33□□□□□ -1.72
UBR3-209ENST00000477461 HNRNPRO43390 633 aaKnown RBP4.33□□□□□ -1.72
UBR3-209ENST00000477461 TFRCP02786 760 aaKnown RBP4.33□□□□□ -1.72
UBR3-209ENST00000477461 DHRS4L1P0CG22 281 aa4.33□□□□□ -1.72
UBR3-209ENST00000477461 ZNF853P0CG23 659 aa4.33□□□□□ -1.72
UBR3-209ENST00000477461 HMGB2P26583 209 aaKnown RBP4.33□□□□□ -1.72
UBR3-209ENST00000477461 SERPINA4P29622 427 aa4.33□□□□□ -1.72
UBR3-209ENST00000477461 ADD2P35612 726 aa4.33□□□□□ -1.72
UBR3-209ENST00000477461 HALP42357 657 aa4.33□□□□□ -1.72
UBR3-209ENST00000477461 KIF5AQ12840 1032 aa4.33□□□□□ -1.72
UBR3-209ENST00000477461 GRSF1Q12849 480 aaKnown RBP eCLIP4.33□□□□□ -1.72
UBR3-209ENST00000477461 TRAF3Q13114 568 aa4.33□□□□□ -1.72
UBR3-209ENST00000477461 SLC39A6Q13433 755 aa4.33□□□□□ -1.72
UBR3-209ENST00000477461 SMAD1Q15797 465 aaKnown RBP4.33□□□□□ -1.72
UBR3-209ENST00000477461 GALNTL6Q49A17 601 aa4.33□□□□□ -1.72
UBR3-209ENST00000477461 FAM171A1Q5VUB5 890 aa4.33□□□□□ -1.72
UBR3-209ENST00000477461 ANO1Q5XXA6 986 aa4.33□□□□□ -1.72
UBR3-209ENST00000477461 MTFR2Q6P444 385 aa4.33□□□□□ -1.72
UBR3-209ENST00000477461 ZNF790Q6PG37 636 aa4.33□□□□□ -1.72
UBR3-209ENST00000477461 RASGRP2Q7LDG7 609 aa4.33□□□□□ -1.72
UBR3-209ENST00000477461 MIGA1Q8NAN2 632 aa4.33□□□□□ -1.72
UBR3-209ENST00000477461 PIGBQ92521 554 aa4.33□□□□□ -1.72
UBR3-209ENST00000477461 CCT6BQ92526 530 aa4.33□□□□□ -1.72
UBR3-209ENST00000477461 KCNJ9Q92806 393 aa4.33□□□□□ -1.72
UBR3-209ENST00000477461 BRD8Q9H0E9 1235 aa4.33□□□□□ -1.72
UBR3-209ENST00000477461 ELAC1Q9H777 363 aaKnown RBP4.33□□□□□ -1.72
UBR3-209ENST00000477461 ZNF556Q9HAH1 456 aa4.33□□□□□ -1.72
UBR3-209ENST00000477461 KIF17Q9P2E2 1029 aa4.33□□□□□ -1.72
UBR3-209ENST00000477461 LZTS1Q9Y250 596 aa4.33□□□□□ -1.72
UBR3-209ENST00000477461 CACNA1FO60840 1977 aa4.33□□□□□ -1.72
UBR3-209ENST00000477461 PALLDQ8WX93 1383 aa4.32□□□□□ -1.72
UBR3-209ENST00000477461 SOS1Q07889 1333 aaPredicted RBP4.32□□□□□ -1.72
UBR3-209ENST00000477461 A0A1B0GUV1 79 aa4.32□□□□□ -1.72
UBR3-209ENST00000477461 LDB2O43679 373 aa4.32□□□□□ -1.72
UBR3-209ENST00000477461 NBNO60934 754 aa4.32□□□□□ -1.72
UBR3-209ENST00000477461 TMCC1O94876 653 aa4.32□□□□□ -1.72
UBR3-209ENST00000477461 HOXB9P17482 250 aaPredicted RBP4.32□□□□□ -1.72
UBR3-209ENST00000477461 EIF2S2P20042 333 aaKnown RBP4.32□□□□□ -1.72
UBR3-209ENST00000477461 PRPH2P23942 346 aa4.32□□□□□ -1.72
UBR3-209ENST00000477461 DHX8Q14562 1220 aaKnown RBP4.32□□□□□ -1.72
UBR3-209ENST00000477461 SLC39A14Q15043 492 aa4.32□□□□□ -1.72
UBR3-209ENST00000477461 POSTNQ15063 836 aa4.32□□□□□ -1.72
UBR3-209ENST00000477461 ZNF284Q2VY69 593 aa4.32□□□□□ -1.72
UBR3-209ENST00000477461 TWISTNBQ3B726 338 aaPredicted RBP4.32□□□□□ -1.72
UBR3-209ENST00000477461 PLK5Q496M5 336 aa4.32□□□□□ -1.72
UBR3-209ENST00000477461 HEPHL1Q6MZM0 1159 aa4.32□□□□□ -1.72
UBR3-209ENST00000477461 H1FNTQ75WM6 255 aaPredicted RBP4.32□□□□□ -1.72
UBR3-209ENST00000477461 PALB2Q86YC2 1186 aa4.32□□□□□ -1.72
UBR3-209ENST00000477461 PTGR2Q8N8N7 351 aaPredicted RBP4.32□□□□□ -1.72
UBR3-209ENST00000477461 RTP4Q96DX8 246 aa4.32□□□□□ -1.72
UBR3-209ENST00000477461 TRAPPC9Q96Q05 1148 aa4.32□□□□□ -1.72
UBR3-209ENST00000477461 GFM1Q96RP9 751 aaKnown RBP4.32□□□□□ -1.72
UBR3-209ENST00000477461 PSMD1Q99460 953 aa4.32□□□□□ -1.72
UBR3-209ENST00000477461 TEX13AQ9BXU3 409 aaPredicted RBP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms