RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 FAM126BQ8IXS8 530 aa11.09□□□□□ -0.63
COL27A1-204ENST00000477421 HIC2Q96JB3 615 aa11.09□□□□□ -0.63
COL27A1-204ENST00000477421 SIKE1Q9BRV8 207 aa11.09□□□□□ -0.63
COL27A1-204ENST00000477421 RNF208Q9H0X6 261 aa11.09□□□□□ -0.63
COL27A1-204ENST00000477421 VRTNQ9H8Y1 702 aa11.09□□□□□ -0.63
COL27A1-204ENST00000477421 GDAP2Q9NXN4 497 aa11.09□□□□□ -0.63
COL27A1-204ENST00000477421 MYADML2A6NDP7 307 aa11.09□□□□□ -0.63
COL27A1-204ENST00000477421 E7ESA3 106 aa11.09□□□□□ -0.63
COL27A1-204ENST00000477421 STX16-NPEPL1H3BU86 382 aa11.09□□□□□ -0.63
COL27A1-204ENST00000477421 CD3EAPO15446 510 aaKnown RBP11.09□□□□□ -0.63
COL27A1-204ENST00000477421 IRAK2O43187 625 aa11.09□□□□□ -0.63
COL27A1-204ENST00000477421 ALDH1A1P00352 501 aa11.09□□□□□ -0.63
COL27A1-204ENST00000477421 HLA-DQB2P05538 268 aa11.09□□□□□ -0.63
COL27A1-204ENST00000477421 PFKMP08237 780 aa11.09□□□□□ -0.63
COL27A1-204ENST00000477421 ITGALP20701 1170 aa11.09□□□□□ -0.63
COL27A1-204ENST00000477421 IL4RP24394 825 aa11.09□□□□□ -0.63
COL27A1-204ENST00000477421 EEF1DP29692 281 aaKnown RBP11.09□□□□□ -0.63
COL27A1-204ENST00000477421 SLC7A2P52569 658 aa11.09□□□□□ -0.63
COL27A1-204ENST00000477421 RPS24P62847 133 aaKnown RBP11.09□□□□□ -0.63
COL27A1-204ENST00000477421 FKBP1BP68106 108 aa11.09□□□□□ -0.63
COL27A1-204ENST00000477421 HSPA14Q0VDF9 509 aa11.09□□□□□ -0.63
COL27A1-204ENST00000477421 ELAVL2Q12926 359 aaKnown RBP11.09□□□□□ -0.63
COL27A1-204ENST00000477421 LRRC23Q53EV4 343 aaPredicted RBP11.09□□□□□ -0.63
COL27A1-204ENST00000477421 HECTD3Q5T447 861 aa11.09□□□□□ -0.63
COL27A1-204ENST00000477421 HECTD2Q5U5R9 776 aa11.09□□□□□ -0.63
COL27A1-204ENST00000477421 PRSS55Q6UWB4 352 aaPredicted RBP11.09□□□□□ -0.63
COL27A1-204ENST00000477421 GPSM1Q86YR5 675 aa11.09□□□□□ -0.63
COL27A1-204ENST00000477421 DSELQ8IZU8 1212 aa11.09□□□□□ -0.63
COL27A1-204ENST00000477421 MYO1HQ8N1T3 1032 aa11.09□□□□□ -0.63
COL27A1-204ENST00000477421 FAM162AQ96A26 154 aa11.09□□□□□ -0.63
COL27A1-204ENST00000477421 SH3KBP1Q96B97 665 aa11.09□□□□□ -0.63
COL27A1-204ENST00000477421 FCRL3Q96P31 734 aaPredicted RBP11.09□□□□□ -0.63
COL27A1-204ENST00000477421 SLC9A7Q96T83 725 aa11.09□□□□□ -0.63
COL27A1-204ENST00000477421 GEMIN8Q9NWZ8 242 aaKnown RBP11.09□□□□□ -0.63
COL27A1-204ENST00000477421 TRAF6Q9Y4K3 522 aa11.09□□□□□ -0.63
COL27A1-204ENST00000477421 SHANK3Q9BYB0 1731 aa11.09□□□□□ -0.63
COL27A1-204ENST00000477421 SF3B1O75533 1304 aaKnown RBP eCLIP11.09□□□□□ -0.63
COL27A1-204ENST00000477421 TTC36A6NLP5 189 aa11.09□□□□□ -0.63
COL27A1-204ENST00000477421 MATN3O15232 486 aa11.09□□□□□ -0.63
COL27A1-204ENST00000477421 SERPIND1P05546 499 aa11.09□□□□□ -0.63
COL27A1-204ENST00000477421 HDCP19113 662 aa11.09□□□□□ -0.63
COL27A1-204ENST00000477421 ATP6V1B2P21281 511 aa11.09□□□□□ -0.63
COL27A1-204ENST00000477421 GLUD2P49448 558 aa11.09□□□□□ -0.63
COL27A1-204ENST00000477421 CLCN5P51795 746 aa11.09□□□□□ -0.63
COL27A1-204ENST00000477421 NEK3P51956 506 aa11.09□□□□□ -0.63
COL27A1-204ENST00000477421 ARHGDIAP52565 204 aa11.09□□□□□ -0.63
COL27A1-204ENST00000477421 IL27RAQ6UWB1 636 aa11.09□□□□□ -0.63
COL27A1-204ENST00000477421 ZBTB46Q86UZ6 589 aa11.09□□□□□ -0.63
COL27A1-204ENST00000477421 NAT14Q8WUY8 206 aa11.09□□□□□ -0.63
COL27A1-204ENST00000477421 RNF145Q96MT1 663 aa11.09□□□□□ -0.63
COL27A1-204ENST00000477421 SLC25A23Q9BV35 468 aa11.09□□□□□ -0.63
COL27A1-204ENST00000477421 ZFP14Q9HCL3 533 aa11.09□□□□□ -0.63
COL27A1-204ENST00000477421 RGS17Q9UGC6 210 aaPredicted RBP11.09□□□□□ -0.63
COL27A1-204ENST00000477421 TCAF1Q9Y4C2 921 aa11.09□□□□□ -0.63
COL27A1-204ENST00000477421 EP400Q96L91 3159 aa11.08□□□□□ -0.64
COL27A1-204ENST00000477421 LTBP4Q8N2S1 1624 aa11.08□□□□□ -0.64
COL27A1-204ENST00000477421 PTGESO14684 152 aa11.08□□□□□ -0.64
COL27A1-204ENST00000477421 GPR32O75388 356 aa11.08□□□□□ -0.64
COL27A1-204ENST00000477421 KCNE1P15382 129 aa11.08□□□□□ -0.64
COL27A1-204ENST00000477421 PEX2P28328 305 aa11.08□□□□□ -0.64
COL27A1-204ENST00000477421 IL2P60568 153 aa11.08□□□□□ -0.64
COL27A1-204ENST00000477421 PPIDQ08752 370 aaKnown RBP11.08□□□□□ -0.64
COL27A1-204ENST00000477421 KRT33BQ14525 404 aa11.08□□□□□ -0.64
COL27A1-204ENST00000477421 KRT72Q14CN4 511 aa11.08□□□□□ -0.64
COL27A1-204ENST00000477421 SYTL3Q4VX76 610 aa11.08□□□□□ -0.64
COL27A1-204ENST00000477421 CGB2Q6NT52 195 aa11.08□□□□□ -0.64
COL27A1-204ENST00000477421 SMG8Q8ND04 991 aaKnown RBP11.08□□□□□ -0.64
COL27A1-204ENST00000477421 THAP11Q96EK4 314 aa11.08□□□□□ -0.64
COL27A1-204ENST00000477421 OXCT2Q9BYC2 517 aaPredicted RBP11.08□□□□□ -0.64
COL27A1-204ENST00000477421 GRIP2Q9C0E4 1043 aa11.08□□□□□ -0.64
COL27A1-204ENST00000477421 GKN1Q9NS71 199 aa11.08□□□□□ -0.64
COL27A1-204ENST00000477421 GTF2IRD1Q9UHL9 959 aa11.08□□□□□ -0.64
COL27A1-204ENST00000477421 VPS9D1Q9Y2B5 631 aa11.08□□□□□ -0.64
COL27A1-204ENST00000477421 KCTD3Q9Y597 815 aa11.08□□□□□ -0.64
COL27A1-204ENST00000477421 A0A087X1B8 175 aa11.08□□□□□ -0.64
COL27A1-204ENST00000477421 DPPA5A6NC42 116 aa11.08□□□□□ -0.64
COL27A1-204ENST00000477421 SNRPB2P08579 225 aaKnown RBP11.08□□□□□ -0.64
COL27A1-204ENST00000477421 CCNCP24863 283 aa11.08□□□□□ -0.64
COL27A1-204ENST00000477421 SH3BGRP55822 239 aaPredicted RBP11.08□□□□□ -0.64
COL27A1-204ENST00000477421 LRRC74AQ0VAA2 488 aa11.08□□□□□ -0.64
COL27A1-204ENST00000477421 INSCQ1MX18 579 aa11.08□□□□□ -0.64
COL27A1-204ENST00000477421 RBM20Q5T481 1227 aaKnown RBP11.08□□□□□ -0.64
COL27A1-204ENST00000477421 ARMCX6Q7L4S7 300 aa11.08□□□□□ -0.64
COL27A1-204ENST00000477421 NPWQ8N729 165 aa11.08□□□□□ -0.64
COL27A1-204ENST00000477421 OR4L1Q8NH43 312 aa11.08□□□□□ -0.64
COL27A1-204ENST00000477421 STAG3L4Q8TBR4 150 aa11.08□□□□□ -0.64
COL27A1-204ENST00000477421 NRBF2Q96F24 287 aa11.08□□□□□ -0.64
COL27A1-204ENST00000477421 DNMT3LQ9UJW3 386 aa11.08□□□□□ -0.64
COL27A1-204ENST00000477421 PCDHB12Q9Y5F1 795 aa11.08□□□□□ -0.64
COL27A1-204ENST00000477421 ARAP2Q8WZ64 1704 aa11.08□□□□□ -0.64
COL27A1-204ENST00000477421 KANSL1LA0AUZ9 987 aa11.08□□□□□ -0.64
COL27A1-204ENST00000477421 F8W810 466 aa11.08□□□□□ -0.64
COL27A1-204ENST00000477421 IPO13O94829 963 aaKnown RBP11.08□□□□□ -0.64
COL27A1-204ENST00000477421 SIX3O95343 332 aaPredicted RBP11.08□□□□□ -0.64
COL27A1-204ENST00000477421 PCNAP12004 261 aa11.08□□□□□ -0.64
COL27A1-204ENST00000477421 GCAP28676 217 aa11.08□□□□□ -0.64
COL27A1-204ENST00000477421 TUFMP49411 452 aaKnown RBP11.08□□□□□ -0.64
COL27A1-204ENST00000477421 AIF1P55008 147 aa11.08□□□□□ -0.64
COL27A1-204ENST00000477421 BIRC2Q13490 618 aa11.08□□□□□ -0.64
COL27A1-204ENST00000477421 FRG1Q14331 258 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms