RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 NEDD8-MDP1E9PL57 170 aa18.67■□□□□ 0.58
VARS2-209ENST00000477288 CACNB4O00305 520 aaPredicted RBP18.67■□□□□ 0.58
VARS2-209ENST00000477288 TP73O15350 636 aa18.67■□□□□ 0.58
VARS2-209ENST00000477288 PSIP1O75475 530 aaKnown RBP18.67■□□□□ 0.58
VARS2-209ENST00000477288 PLA2G4EQ3MJ16 856 aa18.67■□□□□ 0.58
VARS2-209ENST00000477288 ZCCHC9Q8N567 271 aaKnown RBP18.67■□□□□ 0.58
VARS2-209ENST00000477288 COL5A2P05997 1499 aaPredicted RBP18.67■□□□□ 0.58
VARS2-209ENST00000477288 BUD31P41223 144 aaPredicted RBP18.67■□□□□ 0.58
VARS2-209ENST00000477288 UNC5AQ6ZN44 842 aa18.67■□□□□ 0.58
VARS2-209ENST00000477288 PIGZQ86VD9 579 aa18.67■□□□□ 0.58
VARS2-209ENST00000477288 FBXL16Q8N461 479 aa18.67■□□□□ 0.58
VARS2-209ENST00000477288 MAB21L3Q8N8X9 362 aa18.67■□□□□ 0.58
VARS2-209ENST00000477288 CLDN5O00501 218 aa18.67■□□□□ 0.58
VARS2-209ENST00000477288 DBTP11182 482 aaKnown RBP18.67■□□□□ 0.58
VARS2-209ENST00000477288 BMP7P18075 431 aa18.67■□□□□ 0.58
VARS2-209ENST00000477288 RGMBQ6NW40 437 aa18.67■□□□□ 0.58
VARS2-209ENST00000477288 DEF8Q6ZN54 512 aa18.67■□□□□ 0.58
VARS2-209ENST00000477288 SLC39A8Q9C0K1 460 aa18.67■□□□□ 0.58
VARS2-209ENST00000477288 CAB39LQ9H9S4 337 aa18.67■□□□□ 0.58
VARS2-209ENST00000477288 PRDM16Q9HAZ2 1276 aa18.67■□□□□ 0.58
VARS2-209ENST00000477288 MCUBQ9NWR8 336 aa18.67■□□□□ 0.58
VARS2-209ENST00000477288 PACSIN3Q9UKS6 424 aa18.67■□□□□ 0.58
VARS2-209ENST00000477288 TMA7Q9Y2S6 64 aaKnown RBP18.67■□□□□ 0.58
VARS2-209ENST00000477288 LRATO95237 230 aa18.67■□□□□ 0.58
VARS2-209ENST00000477288 ADH1CP00326 375 aa18.67■□□□□ 0.58
VARS2-209ENST00000477288 TNFSF9P41273 254 aa18.67■□□□□ 0.58
VARS2-209ENST00000477288 AADACL2Q6P093 401 aa18.67■□□□□ 0.58
VARS2-209ENST00000477288 BHLHB9Q6PI77 547 aa18.67■□□□□ 0.58
VARS2-209ENST00000477288 ARHGAP36Q6ZRI8 547 aa18.67■□□□□ 0.58
VARS2-209ENST00000477288 GET4Q7L5D6 327 aaPredicted RBP18.67■□□□□ 0.58
VARS2-209ENST00000477288 TAF8Q7Z7C8 310 aa18.67■□□□□ 0.58
VARS2-209ENST00000477288 FAM98AQ8NCA5 519 aaKnown RBP18.67■□□□□ 0.58
VARS2-209ENST00000477288 PHF10Q8WUB8 498 aaKnown RBP18.67■□□□□ 0.58
VARS2-209ENST00000477288 SNRNP25Q9BV90 132 aaKnown RBP18.67■□□□□ 0.58
VARS2-209ENST00000477288 FNDC11Q9BVV2 318 aa18.67■□□□□ 0.58
VARS2-209ENST00000477288 CHADO15335 359 aa18.66■□□□□ 0.58
VARS2-209ENST00000477288 S100GP29377 79 aa18.66■□□□□ 0.58
VARS2-209ENST00000477288 RPL9P32969 192 aaKnown RBP18.66■□□□□ 0.58
VARS2-209ENST00000477288 ZNF844Q08AG5 666 aa18.66■□□□□ 0.58
VARS2-209ENST00000477288 ZNF697Q5TEC3 545 aa18.66■□□□□ 0.58
VARS2-209ENST00000477288 STX12Q86Y82 276 aa18.66■□□□□ 0.58
VARS2-209ENST00000477288 ZNF540Q8NDQ6 660 aa18.66■□□□□ 0.58
VARS2-209ENST00000477288 DEFB118Q96PH6 123 aa18.66■□□□□ 0.58
VARS2-209ENST00000477288 ASF1AQ9Y294 204 aa18.66■□□□□ 0.58
VARS2-209ENST00000477288 AP3M1Q9Y2T2 418 aa18.66■□□□□ 0.58
VARS2-209ENST00000477288 OR10H3O60404 316 aa18.66■□□□□ 0.58
VARS2-209ENST00000477288 SLC25A14O95258 325 aaPredicted RBP18.66■□□□□ 0.58
VARS2-209ENST00000477288 GABRR2P28476 465 aa18.66■□□□□ 0.58
VARS2-209ENST00000477288 TOP3AQ13472 1001 aaPredicted RBP18.66■□□□□ 0.58
VARS2-209ENST00000477288 PTPRNQ16849 979 aa18.66■□□□□ 0.58
VARS2-209ENST00000477288 ETNPPLQ8TBG4 499 aa18.66■□□□□ 0.58
VARS2-209ENST00000477288 L1RE1Q9UN81 338 aa18.66■□□□□ 0.58
VARS2-209ENST00000477288 AVILO75366 819 aa18.66■□□□□ 0.58
VARS2-209ENST00000477288 OR5F1O95221 314 aa18.66■□□□□ 0.58
VARS2-209ENST00000477288 TOP3BO95985 862 aaKnown RBP18.66■□□□□ 0.58
VARS2-209ENST00000477288 ZNF143P52747 638 aaPredicted RBP18.66■□□□□ 0.58
VARS2-209ENST00000477288 UGT2B15P54855 530 aa18.66■□□□□ 0.58
VARS2-209ENST00000477288 MAMLD1Q13495 774 aa18.66■□□□□ 0.58
VARS2-209ENST00000477288 MAPKAPK3Q16644 382 aa18.66■□□□□ 0.58
VARS2-209ENST00000477288 ANKZF1Q9H8Y5 726 aa18.66■□□□□ 0.58
VARS2-209ENST00000477288 GLUD1P00367 558 aa18.66■□□□□ 0.58
VARS2-209ENST00000477288 DCLRE1AQ6PJP8 1040 aa18.66■□□□□ 0.58
VARS2-209ENST00000477288 SPESP1Q6UW49 350 aa18.66■□□□□ 0.58
VARS2-209ENST00000477288 POLNQ7Z5Q5 900 aa18.66■□□□□ 0.58
VARS2-209ENST00000477288 DAW1Q8N136 415 aa18.66■□□□□ 0.58
VARS2-209ENST00000477288 LRRN4Q8WUT4 740 aa18.66■□□□□ 0.58
VARS2-209ENST00000477288 CAPSLQ8WWF8 208 aa18.66■□□□□ 0.58
VARS2-209ENST00000477288 TNKS2Q9H2K2 1166 aa18.66■□□□□ 0.58
VARS2-209ENST00000477288 ZNF780BQ9Y6R6 833 aa18.66■□□□□ 0.58
VARS2-209ENST00000477288 DEPDC5O75140 1603 aa18.66■□□□□ 0.58
VARS2-209ENST00000477288 MROH2AA6NES4 1674 aa18.66■□□□□ 0.58
VARS2-209ENST00000477288 ELFN1P0C7U0 828 aa18.66■□□□□ 0.58
VARS2-209ENST00000477288 MYL9P24844 172 aa18.66■□□□□ 0.58
VARS2-209ENST00000477288 NAIF1Q69YI7 327 aaPredicted RBP18.66■□□□□ 0.58
VARS2-209ENST00000477288 SPATA6LQ8N4H0 392 aa18.66■□□□□ 0.58
VARS2-209ENST00000477288 GAS2L1Q99501 681 aaPredicted RBP18.66■□□□□ 0.58
VARS2-209ENST00000477288 BHLHE41Q9C0J9 482 aaPredicted RBP18.66■□□□□ 0.58
VARS2-209ENST00000477288 AGO1Q9UL18 857 aaKnown RBP18.66■□□□□ 0.58
VARS2-209ENST00000477288 CCDC182A6NF36 153 aa18.65■□□□□ 0.58
VARS2-209ENST00000477288 QSOX1O00391 747 aa18.65■□□□□ 0.58
VARS2-209ENST00000477288 CHRNGP07510 517 aa18.65■□□□□ 0.58
VARS2-209ENST00000477288 PPM1AP35813 382 aa18.65■□□□□ 0.58
VARS2-209ENST00000477288 CLCN5P51795 746 aa18.65■□□□□ 0.58
VARS2-209ENST00000477288 CRNNQ9UBG3 495 aaPredicted RBP18.65■□□□□ 0.58
VARS2-209ENST00000477288 SLC28A1O00337 649 aa18.65■□□□□ 0.58
VARS2-209ENST00000477288 MLYCDO95822 493 aa18.65■□□□□ 0.58
VARS2-209ENST00000477288 CYP3A4P08684 503 aa18.65■□□□□ 0.58
VARS2-209ENST00000477288 Q96MT0 163 aa18.65■□□□□ 0.58
VARS2-209ENST00000477288 LMAN2LQ9H0V9 348 aa18.65■□□□□ 0.58
VARS2-209ENST00000477288 STX16-NPEPL1H3BU86 382 aa18.65■□□□□ 0.58
VARS2-209ENST00000477288 STX16O14662 325 aa18.65■□□□□ 0.58
VARS2-209ENST00000477288 ULK1O75385 1050 aa18.65■□□□□ 0.58
VARS2-209ENST00000477288 ATP4AP20648 1035 aa18.65■□□□□ 0.58
VARS2-209ENST00000477288 PPP3CAQ08209 521 aa18.65■□□□□ 0.58
VARS2-209ENST00000477288 SCRN3Q0VDG4 424 aa18.65■□□□□ 0.58
VARS2-209ENST00000477288 SQLEQ14534 574 aa18.65■□□□□ 0.58
VARS2-209ENST00000477288 FAM151BQ6UXP7 276 aa18.65■□□□□ 0.58
VARS2-209ENST00000477288 ACO2Q99798 780 aaKnown RBP18.65■□□□□ 0.58
VARS2-209ENST00000477288 MAPRE3Q9UPY8 281 aa18.65■□□□□ 0.58
VARS2-209ENST00000477288 H2AFXP16104 143 aaPredicted RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms