RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 MBL2P11226 248 aaPredicted RBP15.36■□□□□ 0.05
CLSTN1-205ENST00000477264 CYP2B6P20813 491 aa15.36■□□□□ 0.05
CLSTN1-205ENST00000477264 ATICP31939 592 aa15.36■□□□□ 0.05
CLSTN1-205ENST00000477264 GRIA3P42263 894 aa15.36■□□□□ 0.05
CLSTN1-205ENST00000477264 PTPN9P43378 593 aa15.36■□□□□ 0.05
CLSTN1-205ENST00000477264 GSSP48637 474 aa15.36■□□□□ 0.05
CLSTN1-205ENST00000477264 NEK2P51955 445 aa15.36■□□□□ 0.05
CLSTN1-205ENST00000477264 CAPSQ13938 189 aa15.36■□□□□ 0.05
CLSTN1-205ENST00000477264 GJC2Q5T442 439 aaPredicted RBP15.36■□□□□ 0.05
CLSTN1-205ENST00000477264 BROXQ5VW32 411 aa15.36■□□□□ 0.05
CLSTN1-205ENST00000477264 IQSEC1Q6DN90 963 aa15.36■□□□□ 0.05
CLSTN1-205ENST00000477264 LCN8Q6JVE9 175 aa15.36■□□□□ 0.05
CLSTN1-205ENST00000477264 TMCO5AQ8N6Q1 288 aa15.36■□□□□ 0.05
CLSTN1-205ENST00000477264 SCYL1Q96KG9 808 aa15.36■□□□□ 0.05
CLSTN1-205ENST00000477264 CTRCQ99895 268 aa15.36■□□□□ 0.05
CLSTN1-205ENST00000477264 PARVBQ9HBI1 364 aa15.36■□□□□ 0.05
CLSTN1-205ENST00000477264 ERVK-11Q9UQG0 969 aa15.36■□□□□ 0.05
CLSTN1-205ENST00000477264 C1orf232A0A0U1RR37 186 aa15.35■□□□□ 0.05
CLSTN1-205ENST00000477264 TFE3P19532 575 aaPredicted RBP15.35■□□□□ 0.05
CLSTN1-205ENST00000477264 ATP6V1B2P21281 511 aa15.35■□□□□ 0.05
CLSTN1-205ENST00000477264 LRPAP1P30533 357 aa15.35■□□□□ 0.05
CLSTN1-205ENST00000477264 GMPRP36959 345 aa15.35■□□□□ 0.05
CLSTN1-205ENST00000477264 CCT8P50990 548 aa15.35■□□□□ 0.05
CLSTN1-205ENST00000477264 DNAJB13P59910 316 aa15.35■□□□□ 0.05
CLSTN1-205ENST00000477264 NME3Q13232 169 aa15.35■□□□□ 0.05
CLSTN1-205ENST00000477264 SLC12A1Q13621 1099 aa15.35■□□□□ 0.05
CLSTN1-205ENST00000477264 PHKG1Q16816 387 aa15.35■□□□□ 0.05
CLSTN1-205ENST00000477264 DUSP28Q4G0W2 176 aa15.35■□□□□ 0.05
CLSTN1-205ENST00000477264 ZNF618Q5T7W0 954 aa15.35■□□□□ 0.05
CLSTN1-205ENST00000477264 LCLAT1Q6UWP7 414 aa15.35■□□□□ 0.05
CLSTN1-205ENST00000477264 USP51Q70EK9 711 aa15.35■□□□□ 0.05
CLSTN1-205ENST00000477264 ZDHHC17Q8IUH5 632 aa15.35■□□□□ 0.05
CLSTN1-205ENST00000477264 EXOC8Q8IYI6 725 aa15.35■□□□□ 0.05
CLSTN1-205ENST00000477264 REM2Q8IYK8 340 aaPredicted RBP15.35■□□□□ 0.05
CLSTN1-205ENST00000477264 PPTC7Q8NI37 304 aa15.35■□□□□ 0.05
CLSTN1-205ENST00000477264 EMID1Q96A84 441 aaPredicted RBP15.35■□□□□ 0.05
CLSTN1-205ENST00000477264 CAPNS2Q96L46 248 aa15.35■□□□□ 0.05
CLSTN1-205ENST00000477264 CSPG4P5Q96PW8 444 aa15.35■□□□□ 0.05
CLSTN1-205ENST00000477264 NAA50Q9GZZ1 169 aaKnown RBP15.35■□□□□ 0.05
CLSTN1-205ENST00000477264 MEAF6Q9HAF1 191 aa15.35■□□□□ 0.05
CLSTN1-205ENST00000477264 ERAP1Q9NZ08 941 aa15.35■□□□□ 0.05
CLSTN1-205ENST00000477264 BFARQ9NZS9 450 aa15.35■□□□□ 0.05
CLSTN1-205ENST00000477264 MTF2Q9Y483 593 aaPredicted RBP15.35■□□□□ 0.05
CLSTN1-205ENST00000477264 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.35■□□□□ 0.05
CLSTN1-205ENST00000477264 MAGEB16A2A368 324 aa15.35■□□□□ 0.05
CLSTN1-205ENST00000477264 UBDO15205 165 aa15.35■□□□□ 0.05
CLSTN1-205ENST00000477264 NRP2O60462 931 aa15.35■□□□□ 0.05
CLSTN1-205ENST00000477264 DNAJB5O75953 348 aa15.35■□□□□ 0.05
CLSTN1-205ENST00000477264 HSD17B1P14061 328 aa15.35■□□□□ 0.05
CLSTN1-205ENST00000477264 GNA12Q03113 381 aa15.35■□□□□ 0.05
CLSTN1-205ENST00000477264 AGKQ53H12 422 aa15.35■□□□□ 0.05
CLSTN1-205ENST00000477264 NANOGNBQ7Z5D8 188 aa15.35■□□□□ 0.05
CLSTN1-205ENST00000477264 ZBTB33Q86T24 672 aa15.35■□□□□ 0.05
CLSTN1-205ENST00000477264 SFRP1Q8N474 314 aa15.35■□□□□ 0.05
CLSTN1-205ENST00000477264 TMEM151AQ8N4L1 468 aa15.35■□□□□ 0.05
CLSTN1-205ENST00000477264 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.35■□□□□ 0.05
CLSTN1-205ENST00000477264 ZMAT2Q96NC0 199 aaKnown RBP15.35■□□□□ 0.05
CLSTN1-205ENST00000477264 FCRL3Q96P31 734 aaPredicted RBP15.35■□□□□ 0.05
CLSTN1-205ENST00000477264 TWNKQ96RR1 684 aa15.35■□□□□ 0.05
CLSTN1-205ENST00000477264 BCL7BQ9BQE9 202 aa15.35■□□□□ 0.05
CLSTN1-205ENST00000477264 BEGAINQ9BUH8 593 aa15.35■□□□□ 0.05
CLSTN1-205ENST00000477264 CREBZFQ9NS37 354 aa15.35■□□□□ 0.05
CLSTN1-205ENST00000477264 GMIPQ9P107 970 aa15.35■□□□□ 0.05
CLSTN1-205ENST00000477264 AP4E1Q9UPM8 1137 aa15.35■□□□□ 0.05
CLSTN1-205ENST00000477264 TARM1B6A8C7 271 aa15.34■□□□□ 0.05
CLSTN1-205ENST00000477264 MSCO60682 206 aa15.34■□□□□ 0.05
CLSTN1-205ENST00000477264 SEC24DO94855 1032 aaPredicted RBP15.34■□□□□ 0.05
CLSTN1-205ENST00000477264 JUNP05412 331 aaKnown RBP15.34■□□□□ 0.05
CLSTN1-205ENST00000477264 SBK3P0C264 359 aa15.34■□□□□ 0.05
CLSTN1-205ENST00000477264 RPL10P27635 214 aaKnown RBP15.34■□□□□ 0.05
CLSTN1-205ENST00000477264 PSMB4P28070 264 aa15.34■□□□□ 0.05
CLSTN1-205ENST00000477264 EEF1DP29692 281 aaKnown RBP15.34■□□□□ 0.05
CLSTN1-205ENST00000477264 FCGRTP55899 365 aa15.34■□□□□ 0.05
CLSTN1-205ENST00000477264 TNFAIP2Q03169 654 aa15.34■□□□□ 0.05
CLSTN1-205ENST00000477264 IFRD2Q12894 506 aaPredicted RBP15.34■□□□□ 0.05
CLSTN1-205ENST00000477264 IRF5Q13568 498 aa15.34■□□□□ 0.05
CLSTN1-205ENST00000477264 NEDD8Q15843 81 aa15.34■□□□□ 0.05
CLSTN1-205ENST00000477264 FAM182AQ5T1J6 154 aa15.34■□□□□ 0.05
CLSTN1-205ENST00000477264 BSPRYQ5W0U4 402 aa15.34■□□□□ 0.05
CLSTN1-205ENST00000477264 KCNMB4Q86W47 210 aa15.34■□□□□ 0.05
CLSTN1-205ENST00000477264 PARP8Q8N3A8 854 aa15.34■□□□□ 0.05
CLSTN1-205ENST00000477264 ATXN7L3BQ96GX2 97 aa15.34■□□□□ 0.05
CLSTN1-205ENST00000477264 MYRFLQ96LU7 910 aa15.34■□□□□ 0.05
CLSTN1-205ENST00000477264 GBA3Q9H227 469 aa15.34■□□□□ 0.05
CLSTN1-205ENST00000477264 RHOJQ9H4E5 214 aa15.34■□□□□ 0.05
CLSTN1-205ENST00000477264 CAB39LQ9H9S4 337 aa15.34■□□□□ 0.05
CLSTN1-205ENST00000477264 TBC1D13Q9NVG8 400 aa15.34■□□□□ 0.05
CLSTN1-205ENST00000477264 IFT80Q9P2H3 777 aaPredicted RBP15.34■□□□□ 0.05
CLSTN1-205ENST00000477264 ABCD2Q9UBJ2 740 aa15.34■□□□□ 0.05
CLSTN1-205ENST00000477264 ZCWPW2A0A1B0GU75 182 aa15.34■□□□□ 0.05
CLSTN1-205ENST00000477264 ERI2A8K979 691 aaKnown RBP15.34■□□□□ 0.05
CLSTN1-205ENST00000477264 FAM47E-STBD1D6RA91 191 aa15.34■□□□□ 0.05
CLSTN1-205ENST00000477264 AOC2O75106 756 aa15.34■□□□□ 0.05
CLSTN1-205ENST00000477264 SMPD1P17405 629 aa15.34■□□□□ 0.05
CLSTN1-205ENST00000477264 ARL4AP40617 200 aa15.34■□□□□ 0.05
CLSTN1-205ENST00000477264 SLC7A2P52569 658 aa15.34■□□□□ 0.05
CLSTN1-205ENST00000477264 SLC6A3Q01959 620 aa15.34■□□□□ 0.05
CLSTN1-205ENST00000477264 TARBP2Q15633 366 aaKnown RBP15.34■□□□□ 0.05
CLSTN1-205ENST00000477264 DLG2Q15700 870 aa15.34■□□□□ 0.05
CLSTN1-205ENST00000477264 OR6J1Q8NGC5 347 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms