RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 TIAF1O95411 115 aa7.39□□□□□ -1.23
BRCA1-214ENST00000477152 ADCY5O95622 1261 aa7.39□□□□□ -1.23
BRCA1-214ENST00000477152 IMPDH2P12268 514 aa7.39□□□□□ -1.23
BRCA1-214ENST00000477152 CKMT1AP12532 417 aa7.39□□□□□ -1.23
BRCA1-214ENST00000477152 SRCP12931 536 aa7.39□□□□□ -1.23
BRCA1-214ENST00000477152 RBMS1P29558 406 aaKnown RBP7.39□□□□□ -1.23
BRCA1-214ENST00000477152 TMPRSS3P57727 454 aa7.39□□□□□ -1.23
BRCA1-214ENST00000477152 ERVPABLB-1P60509 514 aa7.39□□□□□ -1.23
BRCA1-214ENST00000477152 RHDQ02161 417 aa7.39□□□□□ -1.23
BRCA1-214ENST00000477152 POLD3Q15054 466 aaPredicted RBP7.39□□□□□ -1.23
BRCA1-214ENST00000477152 TBC1D25Q3MII6 688 aa7.39□□□□□ -1.23
BRCA1-214ENST00000477152 FAM183BPQ6ZVS7 135 aa7.39□□□□□ -1.23
BRCA1-214ENST00000477152 ERICH1Q86X53 443 aa7.39□□□□□ -1.23
BRCA1-214ENST00000477152 DCBLD1Q8N8Z6 715 aa7.39□□□□□ -1.23
BRCA1-214ENST00000477152 ZSCAN1Q8NBB4 408 aa7.39□□□□□ -1.23
BRCA1-214ENST00000477152 FCRL3Q96P31 734 aaPredicted RBP7.39□□□□□ -1.23
BRCA1-214ENST00000477152 HAPLN3Q96S86 360 aa7.39□□□□□ -1.23
BRCA1-214ENST00000477152 SRPK1Q96SB4 655 aaKnown RBP7.39□□□□□ -1.23
BRCA1-214ENST00000477152 CPXM1Q96SM3 734 aa7.39□□□□□ -1.23
BRCA1-214ENST00000477152 HEPHQ9BQS7 1158 aa7.39□□□□□ -1.23
BRCA1-214ENST00000477152 DPH1Q9BZG8 443 aa7.39□□□□□ -1.23
BRCA1-214ENST00000477152 MRPL18Q9H0U6 180 aaKnown RBP7.39□□□□□ -1.23
BRCA1-214ENST00000477152 THSD1Q9NS62 852 aa7.39□□□□□ -1.23
BRCA1-214ENST00000477152 ARHGEF38Q9NXL2 777 aa7.39□□□□□ -1.23
BRCA1-214ENST00000477152 PKD1L2Q7Z442 2459 aa7.39□□□□□ -1.23
BRCA1-214ENST00000477152 C10orf142B7Z368 130 aa7.39□□□□□ -1.23
BRCA1-214ENST00000477152 TMX2-CTNND1H3BSU7 103 aa7.39□□□□□ -1.23
BRCA1-214ENST00000477152 TSPAN6O43657 245 aa7.39□□□□□ -1.23
BRCA1-214ENST00000477152 AP1G1O43747 822 aa7.39□□□□□ -1.23
BRCA1-214ENST00000477152 GRAP2O75791 330 aa7.39□□□□□ -1.23
BRCA1-214ENST00000477152 LSM8O95777 96 aaKnown RBP7.39□□□□□ -1.23
BRCA1-214ENST00000477152 DGKAP23743 735 aa7.39□□□□□ -1.23
BRCA1-214ENST00000477152 ITGB7P26010 798 aa7.39□□□□□ -1.23
BRCA1-214ENST00000477152 L1CAMP32004 1257 aa7.39□□□□□ -1.23
BRCA1-214ENST00000477152 PREPP48147 710 aa7.39□□□□□ -1.23
BRCA1-214ENST00000477152 CXCR3P49682 368 aa7.39□□□□□ -1.23
BRCA1-214ENST00000477152 RNASE9P60153 205 aaKnown RBP7.39□□□□□ -1.23
BRCA1-214ENST00000477152 INSM1Q01101 510 aaPredicted RBP7.39□□□□□ -1.23
BRCA1-214ENST00000477152 MAN2A1Q16706 1144 aa7.39□□□□□ -1.23
BRCA1-214ENST00000477152 SLC25A52Q3SY17 297 aa7.39□□□□□ -1.23
BRCA1-214ENST00000477152 FAM102AQ5T9C2 384 aaPredicted RBP7.39□□□□□ -1.23
BRCA1-214ENST00000477152 ZCCHC8Q6NZY4 707 aaKnown RBP7.39□□□□□ -1.23
BRCA1-214ENST00000477152 C22orf39Q6P5X5 142 aa7.39□□□□□ -1.23
BRCA1-214ENST00000477152 OLFML1Q6UWY5 402 aa7.39□□□□□ -1.23
BRCA1-214ENST00000477152 KYAT3Q6YP21 454 aaKnown RBP7.39□□□□□ -1.23
BRCA1-214ENST00000477152 KDM7AQ6ZMT4 941 aa7.39□□□□□ -1.23
BRCA1-214ENST00000477152 PTAR1Q7Z6K3 402 aaPredicted RBP7.39□□□□□ -1.23
BRCA1-214ENST00000477152 CIR1Q86X95 450 aaPredicted RBP7.39□□□□□ -1.23
BRCA1-214ENST00000477152 SPATS2Q86XZ4 545 aaKnown RBP7.39□□□□□ -1.23
BRCA1-214ENST00000477152 PASD1Q8IV76 773 aa7.39□□□□□ -1.23
BRCA1-214ENST00000477152 FAM181AQ8N9Y4 354 aa7.39□□□□□ -1.23
BRCA1-214ENST00000477152 C2CD4AQ8NCU7 369 aaPredicted RBP7.39□□□□□ -1.23
BRCA1-214ENST00000477152 DENND6BQ8NEG7 585 aa7.39□□□□□ -1.23
BRCA1-214ENST00000477152 ATL2Q8NHH9 583 aa7.39□□□□□ -1.23
BRCA1-214ENST00000477152 ASB12Q8WXK4 309 aa7.39□□□□□ -1.23
BRCA1-214ENST00000477152 ISL2Q96A47 359 aa7.39□□□□□ -1.23
BRCA1-214ENST00000477152 MYEOVQ96EZ4 313 aa7.39□□□□□ -1.23
BRCA1-214ENST00000477152 ALG14Q96F25 216 aa7.39□□□□□ -1.23
BRCA1-214ENST00000477152 WBP1Q96G27 269 aa7.39□□□□□ -1.23
BRCA1-214ENST00000477152 NPY6RQ99463 290 aa7.39□□□□□ -1.23
BRCA1-214ENST00000477152 IL12RB2Q99665 862 aa7.39□□□□□ -1.23
BRCA1-214ENST00000477152 CRACR2AQ9BSW2 395 aa7.39□□□□□ -1.23
BRCA1-214ENST00000477152 OSBPL1AQ9BXW6 950 aa7.39□□□□□ -1.23
BRCA1-214ENST00000477152 SLC17A9Q9BYT1 436 aa7.39□□□□□ -1.23
BRCA1-214ENST00000477152 ZYG11BQ9C0D3 744 aa7.39□□□□□ -1.23
BRCA1-214ENST00000477152 PRORYQ9H606 182 aa7.39□□□□□ -1.23
BRCA1-214ENST00000477152 CYP4F12Q9HCS2 524 aa7.39□□□□□ -1.23
BRCA1-214ENST00000477152 ATP13A1Q9HD20 1204 aa7.39□□□□□ -1.23
BRCA1-214ENST00000477152 DNAJC28Q9NX36 388 aa7.39□□□□□ -1.23
BRCA1-214ENST00000477152 DNAJC12Q9UKB3 198 aa7.39□□□□□ -1.23
BRCA1-214ENST00000477152 DAAM1Q9Y4D1 1078 aa7.39□□□□□ -1.23
BRCA1-214ENST00000477152 KNTC1P50748 2209 aa7.38□□□□□ -1.23
BRCA1-214ENST00000477152 ANKRD11Q6UB99 2663 aaPredicted RBP7.38□□□□□ -1.23
BRCA1-214ENST00000477152 AKAP13Q12802 2813 aa7.38□□□□□ -1.23
BRCA1-214ENST00000477152 ZSCAN5CA6NGD5 496 aaPredicted RBP7.38□□□□□ -1.23
BRCA1-214ENST00000477152 DRGXA6NNA5 263 aa7.38□□□□□ -1.23
BRCA1-214ENST00000477152 CBX4O00257 560 aa7.38□□□□□ -1.23
BRCA1-214ENST00000477152 PES1O00541 588 aaKnown RBP7.38□□□□□ -1.23
BRCA1-214ENST00000477152 SCAMP1O15126 338 aa7.38□□□□□ -1.23
BRCA1-214ENST00000477152 BRINP1O60477 761 aa7.38□□□□□ -1.23
BRCA1-214ENST00000477152 SDC3O75056 442 aa7.38□□□□□ -1.23
BRCA1-214ENST00000477152 PIAS2O75928 621 aa7.38□□□□□ -1.23
BRCA1-214ENST00000477152 VAV1P15498 845 aa7.38□□□□□ -1.23
BRCA1-214ENST00000477152 SLC9A1P19634 815 aa7.38□□□□□ -1.23
BRCA1-214ENST00000477152 PON1P27169 355 aa7.38□□□□□ -1.23
BRCA1-214ENST00000477152 BLKP51451 505 aa7.38□□□□□ -1.23
BRCA1-214ENST00000477152 DNA2P51530 1060 aa7.38□□□□□ -1.23
BRCA1-214ENST00000477152 THOP1P52888 689 aa7.38□□□□□ -1.23
BRCA1-214ENST00000477152 SNRPD1P62314 119 aaKnown RBP7.38□□□□□ -1.23
BRCA1-214ENST00000477152 ZNF284Q2VY69 593 aa7.38□□□□□ -1.23
BRCA1-214ENST00000477152 TAF1BQ53T94 588 aaPredicted RBP7.38□□□□□ -1.23
BRCA1-214ENST00000477152 CARD16Q5EG05 197 aa7.38□□□□□ -1.23
BRCA1-214ENST00000477152 TMEM201Q5SNT2 666 aa7.38□□□□□ -1.23
BRCA1-214ENST00000477152 PIP5KL1Q5T9C9 394 aa7.38□□□□□ -1.23
BRCA1-214ENST00000477152 FDX2Q6P4F2 183 aa7.38□□□□□ -1.23
BRCA1-214ENST00000477152 ARCQ7LC44 396 aa7.38□□□□□ -1.23
BRCA1-214ENST00000477152 NLRC3Q7RTR2 1065 aa7.38□□□□□ -1.23
BRCA1-214ENST00000477152 KANSL1Q7Z3B3 1105 aa7.38□□□□□ -1.23
BRCA1-214ENST00000477152 PARGQ86W56 976 aa7.38□□□□□ -1.23
BRCA1-214ENST00000477152 ZNF677Q86XU0 584 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms