RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 CCR10P46092 362 aa11.47□□□□□ -0.57
BRCA1-213ENST00000476777 ATP1A2P50993 1020 aa11.47□□□□□ -0.57
BRCA1-213ENST00000476777 GEMIN4P57678 1058 aaKnown RBP11.47□□□□□ -0.57
BRCA1-213ENST00000476777 B4GALNT1Q00973 533 aa11.47□□□□□ -0.57
BRCA1-213ENST00000476777 APBA1Q02410 837 aa11.47□□□□□ -0.57
BRCA1-213ENST00000476777 INPP5AQ14642 412 aa11.47□□□□□ -0.57
BRCA1-213ENST00000476777 NCAPHQ15003 741 aa11.47□□□□□ -0.57
BRCA1-213ENST00000476777 ARHGAP44Q17R89 818 aa11.47□□□□□ -0.57
BRCA1-213ENST00000476777 TMEM52BQ4KMG9 183 aa11.47□□□□□ -0.57
BRCA1-213ENST00000476777 C14orf28Q4W4Y0 310 aa11.47□□□□□ -0.57
BRCA1-213ENST00000476777 EFHC2Q5JST6 749 aa11.47□□□□□ -0.57
BRCA1-213ENST00000476777 ISM2Q6H9L7 571 aa11.47□□□□□ -0.57
BRCA1-213ENST00000476777 KLHL10Q6JEL2 608 aa11.47□□□□□ -0.57
BRCA1-213ENST00000476777 TRIM65Q6PJ69 517 aa11.47□□□□□ -0.57
BRCA1-213ENST00000476777 FOXR2Q6PJQ5 311 aa11.47□□□□□ -0.57
BRCA1-213ENST00000476777 LEKR1Q6ZMV7 388 aa11.47□□□□□ -0.57
BRCA1-213ENST00000476777 BNIPLQ7Z465 357 aa11.47□□□□□ -0.57
BRCA1-213ENST00000476777 FAM46DQ8NEK8 389 aa11.47□□□□□ -0.57
BRCA1-213ENST00000476777 SHC3Q92529 594 aa11.47□□□□□ -0.57
BRCA1-213ENST00000476777 PMEPA1Q969W9 287 aa11.47□□□□□ -0.57
BRCA1-213ENST00000476777 FAM81BQ96LP2 452 aa11.47□□□□□ -0.57
BRCA1-213ENST00000476777 WDR92Q96MX6 357 aa11.47□□□□□ -0.57
BRCA1-213ENST00000476777 RDH14Q9HBH5 336 aa11.47□□□□□ -0.57
BRCA1-213ENST00000476777 ESPL1Q14674 2120 aa11.47□□□□□ -0.57
BRCA1-213ENST00000476777 BLACEA4D250 179 aa11.46□□□□□ -0.57
BRCA1-213ENST00000476777 PPP1R3GB7ZBB8 358 aa11.46□□□□□ -0.57
BRCA1-213ENST00000476777 B4GAT1O43505 415 aa11.46□□□□□ -0.57
BRCA1-213ENST00000476777 CPNE6O95741 557 aa11.46□□□□□ -0.57
BRCA1-213ENST00000476777 GNA14O95837 355 aa11.46□□□□□ -0.57
BRCA1-213ENST00000476777 FGF3P11487 239 aaPredicted RBP11.46□□□□□ -0.57
BRCA1-213ENST00000476777 KRT9P35527 623 aa11.46□□□□□ -0.57
BRCA1-213ENST00000476777 FLT3P36888 993 aa11.46□□□□□ -0.57
BRCA1-213ENST00000476777 SCNN1AP37088 669 aa11.46□□□□□ -0.57
BRCA1-213ENST00000476777 ARHGEF7Q14155 803 aa11.46□□□□□ -0.57
BRCA1-213ENST00000476777 MAP9Q49MG5 647 aa11.46□□□□□ -0.57
BRCA1-213ENST00000476777 MANEALQ5VSG8 457 aa11.46□□□□□ -0.57
BRCA1-213ENST00000476777 TRNP1Q6NT89 227 aa11.46□□□□□ -0.57
BRCA1-213ENST00000476777 TAF8Q7Z7C8 310 aa11.46□□□□□ -0.57
BRCA1-213ENST00000476777 PIM3Q86V86 326 aa11.46□□□□□ -0.57
BRCA1-213ENST00000476777 NLRP14Q86W24 1093 aa11.46□□□□□ -0.57
BRCA1-213ENST00000476777 FAM131BQ86XD5 332 aa11.46□□□□□ -0.57
BRCA1-213ENST00000476777 IRF2BP1Q8IU81 584 aa11.46□□□□□ -0.57
BRCA1-213ENST00000476777 RCBTB1Q8NDN9 531 aa11.46□□□□□ -0.57
BRCA1-213ENST00000476777 ATL2Q8NHH9 583 aa11.46□□□□□ -0.57
BRCA1-213ENST00000476777 GPBAR1Q8TDU6 330 aa11.46□□□□□ -0.57
BRCA1-213ENST00000476777 NELFBQ8WX92 580 aa11.46□□□□□ -0.57
BRCA1-213ENST00000476777 OR1E3Q8WZA6 343 aa11.46□□□□□ -0.57
BRCA1-213ENST00000476777 GDAP1L1Q96MZ0 367 aa11.46□□□□□ -0.57
BRCA1-213ENST00000476777 TAAR9Q96RI9 348 aa11.46□□□□□ -0.57
BRCA1-213ENST00000476777 CDH19Q9H159 772 aa11.46□□□□□ -0.57
BRCA1-213ENST00000476777 GDPD2Q9HCC8 539 aa11.46□□□□□ -0.57
BRCA1-213ENST00000476777 PLCB1Q9NQ66 1216 aa11.46□□□□□ -0.57
BRCA1-213ENST00000476777 ZNF71Q9NQZ8 489 aaPredicted RBP11.46□□□□□ -0.57
BRCA1-213ENST00000476777 AKAP7Q9P0M2 348 aaPredicted RBP11.46□□□□□ -0.57
BRCA1-213ENST00000476777 DNAI1Q9UI46 699 aa11.46□□□□□ -0.57
BRCA1-213ENST00000476777 HPCAL4Q9UM19 191 aa11.46□□□□□ -0.57
BRCA1-213ENST00000476777 PLAAQ9Y263 795 aa11.46□□□□□ -0.57
BRCA1-213ENST00000476777 MFHAS1Q9Y4C4 1052 aa11.46□□□□□ -0.57
BRCA1-213ENST00000476777 PCDHGA3Q9Y5H0 932 aa11.46□□□□□ -0.57
BRCA1-213ENST00000476777 B4DGG1 531 aa11.45□□□□□ -0.58
BRCA1-213ENST00000476777 HGSO14964 777 aaPredicted RBP11.45□□□□□ -0.58
BRCA1-213ENST00000476777 TMCC1O94876 653 aa11.45□□□□□ -0.58
BRCA1-213ENST00000476777 SLC9A1P19634 815 aa11.45□□□□□ -0.58
BRCA1-213ENST00000476777 BMP6P22004 513 aa11.45□□□□□ -0.58
BRCA1-213ENST00000476777 UGT1A3P35503 534 aa11.45□□□□□ -0.58
BRCA1-213ENST00000476777 GABRB2P47870 512 aa11.45□□□□□ -0.58
BRCA1-213ENST00000476777 MAPKAPK2P49137 400 aa11.45□□□□□ -0.58
BRCA1-213ENST00000476777 SUOXP51687 545 aa11.45□□□□□ -0.58
BRCA1-213ENST00000476777 OR1D5P58170 312 aa11.45□□□□□ -0.58
BRCA1-213ENST00000476777 NRG1Q02297 640 aaPredicted RBP11.45□□□□□ -0.58
BRCA1-213ENST00000476777 PTK2Q05397 1052 aa11.45□□□□□ -0.58
BRCA1-213ENST00000476777 ELP6Q0PNE2 266 aa11.45□□□□□ -0.58
BRCA1-213ENST00000476777 AGERQ15109 404 aa11.45□□□□□ -0.58
BRCA1-213ENST00000476777 AMZ1Q400G9 498 aa11.45□□□□□ -0.58
BRCA1-213ENST00000476777 FAM102AQ5T9C2 384 aaPredicted RBP11.45□□□□□ -0.58
BRCA1-213ENST00000476777 SPECC1LQ69YQ0 1117 aa11.45□□□□□ -0.58
BRCA1-213ENST00000476777 ZNF438Q7Z4V0 828 aa11.45□□□□□ -0.58
BRCA1-213ENST00000476777 SLC47A2Q86VL8 602 aa11.45□□□□□ -0.58
BRCA1-213ENST00000476777 XYLT1Q86Y38 959 aa11.45□□□□□ -0.58
BRCA1-213ENST00000476777 IL22RA1Q8N6P7 574 aa11.45□□□□□ -0.58
BRCA1-213ENST00000476777 NETO2Q8NC67 525 aa11.45□□□□□ -0.58
BRCA1-213ENST00000476777 C9orf43Q8TAL5 461 aaPredicted RBP11.45□□□□□ -0.58
BRCA1-213ENST00000476777 HMCESQ96FZ2 354 aa11.45□□□□□ -0.58
BRCA1-213ENST00000476777 CATSPER2Q96P56 530 aa11.45□□□□□ -0.58
BRCA1-213ENST00000476777 NUDT22Q9BRQ3 303 aa11.45□□□□□ -0.58
BRCA1-213ENST00000476777 TTYH3Q9C0H2 523 aa11.45□□□□□ -0.58
BRCA1-213ENST00000476777 TMEM168Q9H0V1 697 aa11.45□□□□□ -0.58
BRCA1-213ENST00000476777 MAGEH1Q9H213 219 aa11.45□□□□□ -0.58
BRCA1-213ENST00000476777 RETREG1Q9H6L5 497 aa11.45□□□□□ -0.58
BRCA1-213ENST00000476777 FGF22Q9HCT0 170 aa11.45□□□□□ -0.58
BRCA1-213ENST00000476777 TMEM248Q9NWD8 314 aa11.45□□□□□ -0.58
BRCA1-213ENST00000476777 APEX2Q9UBZ4 518 aa11.45□□□□□ -0.58
BRCA1-213ENST00000476777 OR12D3Q9UGF7 316 aa11.45□□□□□ -0.58
BRCA1-213ENST00000476777 NEU3Q9UQ49 428 aa11.45□□□□□ -0.58
BRCA1-213ENST00000476777 B3GALT1Q9Y5Z6 326 aa11.45□□□□□ -0.58
BRCA1-213ENST00000476777 ANKRD36A6QL64 1941 aa11.45□□□□□ -0.58
BRCA1-213ENST00000476777 IGHV5-10-1A0A0J9YXX1 117 aa11.44□□□□□ -0.58
BRCA1-213ENST00000476777 BICDL2A1A5D9 508 aa11.44□□□□□ -0.58
BRCA1-213ENST00000476777 TMEM202A6NGA9 273 aa11.44□□□□□ -0.58
BRCA1-213ENST00000476777 ZNF891A8MT65 544 aaPredicted RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms