RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 POMPQ9Y244 141 aa16.57■□□□□ 0.24
TMEM53-208ENST00000476724 VNN2O95498 520 aa16.57■□□□□ 0.24
TMEM53-208ENST00000476724 PDHA1P08559 390 aa16.57■□□□□ 0.24
TMEM53-208ENST00000476724 PPARGP37231 505 aaPredicted RBP16.57■□□□□ 0.24
TMEM53-208ENST00000476724 DEFB103AP81534 67 aa16.57■□□□□ 0.24
TMEM53-208ENST00000476724 DSG1Q02413 1049 aa16.57■□□□□ 0.24
TMEM53-208ENST00000476724 DLG1Q12959 904 aa16.57■□□□□ 0.24
TMEM53-208ENST00000476724 HERC3Q15034 1050 aa16.57■□□□□ 0.24
TMEM53-208ENST00000476724 SLC14A2Q15849 920 aa16.57■□□□□ 0.24
TMEM53-208ENST00000476724 MS4A13Q5J8X5 152 aa16.57■□□□□ 0.24
TMEM53-208ENST00000476724 FAM43BQ6ZT52 329 aaPredicted RBP16.57■□□□□ 0.24
TMEM53-208ENST00000476724 TEX26Q8N6G2 289 aa16.57■□□□□ 0.24
TMEM53-208ENST00000476724 GPR152Q8TDT2 470 aa16.57■□□□□ 0.24
TMEM53-208ENST00000476724 FAR2Q96K12 515 aa16.57■□□□□ 0.24
TMEM53-208ENST00000476724 OMDQ99983 421 aa16.57■□□□□ 0.24
TMEM53-208ENST00000476724 VN1R3Q9BXE9 311 aa16.57■□□□□ 0.24
TMEM53-208ENST00000476724 SHCBP1LQ9BZQ2 653 aa16.57■□□□□ 0.24
TMEM53-208ENST00000476724 ATXN3LQ9H3M9 355 aa16.57■□□□□ 0.24
TMEM53-208ENST00000476724 WDR55Q9H6Y2 383 aaPredicted RBP16.57■□□□□ 0.24
TMEM53-208ENST00000476724 SP110Q9HB58 689 aa16.57■□□□□ 0.24
TMEM53-208ENST00000476724 CYP4F11Q9HBI6 524 aa16.57■□□□□ 0.24
TMEM53-208ENST00000476724 PPM1HQ9ULR3 514 aa16.57■□□□□ 0.24
TMEM53-208ENST00000476724 FAM92AA1XBS5 289 aa16.56■□□□□ 0.24
TMEM53-208ENST00000476724 SLC7A4O43246 635 aa16.56■□□□□ 0.24
TMEM53-208ENST00000476724 TBC1D4O60343 1298 aa16.56■□□□□ 0.24
TMEM53-208ENST00000476724 RBP1P09455 135 aa16.56■□□□□ 0.24
TMEM53-208ENST00000476724 CHRNA4P43681 627 aa16.56■□□□□ 0.24
TMEM53-208ENST00000476724 MTA1Q13330 715 aa16.56■□□□□ 0.24
TMEM53-208ENST00000476724 TRIP4Q15650 581 aaPredicted RBP16.56■□□□□ 0.24
TMEM53-208ENST00000476724 PCSK7Q16549 785 aa16.56■□□□□ 0.24
TMEM53-208ENST00000476724 KLC3Q6P597 504 aa16.56■□□□□ 0.24
TMEM53-208ENST00000476724 SLC25A41Q8N5S1 370 aa16.56■□□□□ 0.24
TMEM53-208ENST00000476724 HEXDCQ8WVB3 486 aa16.56■□□□□ 0.24
TMEM53-208ENST00000476724 HMCESQ96FZ2 354 aa16.56■□□□□ 0.24
TMEM53-208ENST00000476724 NR1H4Q96RI1 486 aaPredicted RBP16.56■□□□□ 0.24
TMEM53-208ENST00000476724 NUF2Q9BZD4 464 aa16.56■□□□□ 0.24
TMEM53-208ENST00000476724 ZNF385DQ9H6B1 395 aa16.56■□□□□ 0.24
TMEM53-208ENST00000476724 NT5MQ9NPB1 228 aa16.56■□□□□ 0.24
TMEM53-208ENST00000476724 VPS28Q9UK41 221 aa16.56■□□□□ 0.24
TMEM53-208ENST00000476724 SLC27A5Q9Y2P5 690 aa16.56■□□□□ 0.24
TMEM53-208ENST00000476724 PTPRSQ13332 1948 aa16.56■□□□□ 0.24
TMEM53-208ENST00000476724 GREB1Q4ZG55 1949 aa16.56■□□□□ 0.24
TMEM53-208ENST00000476724 OR6C75A6NL08 312 aa16.55■□□□□ 0.24
TMEM53-208ENST00000476724 EPHA3P29320 983 aa16.55■□□□□ 0.24
TMEM53-208ENST00000476724 USP46P62068 366 aa16.55■□□□□ 0.24
TMEM53-208ENST00000476724 SATB1Q01826 763 aa16.55■□□□□ 0.24
TMEM53-208ENST00000476724 ITKQ08881 620 aa16.55■□□□□ 0.24
TMEM53-208ENST00000476724 NSUN2Q08J23 767 aaKnown RBP eCLIP16.55■□□□□ 0.24
TMEM53-208ENST00000476724 MSLNQ13421 630 aaPredicted RBP16.55■□□□□ 0.24
TMEM53-208ENST00000476724 LAMB3Q13751 1172 aa16.55■□□□□ 0.24
TMEM53-208ENST00000476724 CYLC2Q14093 348 aaPredicted RBP16.55■□□□□ 0.24
TMEM53-208ENST00000476724 CCNIQ14094 377 aa16.55■□□□□ 0.24
TMEM53-208ENST00000476724 ZNF460Q14592 562 aa16.55■□□□□ 0.24
TMEM53-208ENST00000476724 RNF19BQ6ZMZ0 732 aa16.55■□□□□ 0.24
TMEM53-208ENST00000476724 KDELC2Q7Z4H8 507 aa16.55■□□□□ 0.24
TMEM53-208ENST00000476724 DHDDSQ86SQ9 333 aa16.55■□□□□ 0.24
TMEM53-208ENST00000476724 AFAP1L2Q8N4X5 818 aa16.55■□□□□ 0.24
TMEM53-208ENST00000476724 KDM1BQ8NB78 822 aa16.55■□□□□ 0.24
TMEM53-208ENST00000476724 KYQ8NBH2 561 aa16.55■□□□□ 0.24
TMEM53-208ENST00000476724 SLC26A7Q8TE54 656 aa16.55■□□□□ 0.24
TMEM53-208ENST00000476724 BCAP29Q9UHQ4 241 aa16.55■□□□□ 0.24
TMEM53-208ENST00000476724 MTMR11A4FU01 709 aa16.55■□□□□ 0.24
TMEM53-208ENST00000476724 MAGEA13PA6NCF6 341 aa16.55■□□□□ 0.24
TMEM53-208ENST00000476724 NEMP1O14524 444 aa16.55■□□□□ 0.24
TMEM53-208ENST00000476724 PDE5AO76074 875 aa16.55■□□□□ 0.24
TMEM53-208ENST00000476724 RTN3O95197 1032 aaPredicted RBP16.55■□□□□ 0.24
TMEM53-208ENST00000476724 LTA4HP09960 611 aaKnown RBP16.55■□□□□ 0.24
TMEM53-208ENST00000476724 SLC26A3P40879 764 aa16.55■□□□□ 0.24
TMEM53-208ENST00000476724 CD86P42081 329 aa16.55■□□□□ 0.24
TMEM53-208ENST00000476724 XIAPP98170 497 aa16.55■□□□□ 0.24
TMEM53-208ENST00000476724 SLC10A7Q0GE19 358 aa16.55■□□□□ 0.24
TMEM53-208ENST00000476724 SH2D4BQ5SQS7 431 aa16.55■□□□□ 0.24
TMEM53-208ENST00000476724 CNSTQ6PJW8 725 aa16.55■□□□□ 0.24
TMEM53-208ENST00000476724 CCNYL1Q8N7R7 359 aa16.55■□□□□ 0.24
TMEM53-208ENST00000476724 TOP1MTQ969P6 601 aa16.55■□□□□ 0.24
TMEM53-208ENST00000476724 TADA1Q96BN2 335 aa16.55■□□□□ 0.24
TMEM53-208ENST00000476724 MAELQ96JY0 434 aaKnown RBP16.55■□□□□ 0.24
TMEM53-208ENST00000476724 ECSITQ9BQ95 431 aa16.55■□□□□ 0.24
TMEM53-208ENST00000476724 TTPALQ9BTX7 342 aa16.55■□□□□ 0.24
TMEM53-208ENST00000476724 EML4Q9HC35 981 aaKnown RBP16.55■□□□□ 0.24
TMEM53-208ENST00000476724 IGSF5Q9NSI5 407 aa16.55■□□□□ 0.24
TMEM53-208ENST00000476724 COMMD8Q9NX08 183 aa16.55■□□□□ 0.24
TMEM53-208ENST00000476724 GMIPQ9P107 970 aa16.55■□□□□ 0.24
TMEM53-208ENST00000476724 STK39Q9UEW8 545 aa16.55■□□□□ 0.24
TMEM53-208ENST00000476724 SCOCQ9UIL1 159 aa16.55■□□□□ 0.24
TMEM53-208ENST00000476724 MROH6A6NGR9 719 aa16.54■□□□□ 0.24
TMEM53-208ENST00000476724 DRGXA6NNA5 263 aa16.54■□□□□ 0.24
TMEM53-208ENST00000476724 J3KR12 359 aa16.54■□□□□ 0.24
TMEM53-208ENST00000476724 ADAM12O43184 909 aa16.54■□□□□ 0.24
TMEM53-208ENST00000476724 EFEMP2O95967 443 aa16.54■□□□□ 0.24
TMEM53-208ENST00000476724 TIMP1P01033 207 aa16.54■□□□□ 0.24
TMEM53-208ENST00000476724 ACRP10323 421 aa16.54■□□□□ 0.24
TMEM53-208ENST00000476724 YWHAQP27348 245 aa16.54■□□□□ 0.24
TMEM53-208ENST00000476724 ALDH7A1P49419 539 aaKnown RBP16.54■□□□□ 0.24
TMEM53-208ENST00000476724 YBEYP58557 167 aaPredicted RBP16.54■□□□□ 0.24
TMEM53-208ENST00000476724 IL10RBQ08334 325 aa16.54■□□□□ 0.24
TMEM53-208ENST00000476724 GALNT1Q10472 559 aaPredicted RBP16.54■□□□□ 0.24
TMEM53-208ENST00000476724 EFEMP1Q12805 493 aa16.54■□□□□ 0.24
TMEM53-208ENST00000476724 ELAVL2Q12926 359 aaKnown RBP16.54■□□□□ 0.24
TMEM53-208ENST00000476724 BTG3Q14201 252 aaPredicted RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms