RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 PDE2AO00408 941 aaPredicted RBP11.02□□□□□ -0.65
VAPB-204ENST00000475243 CCL16O15467 120 aa11.02□□□□□ -0.65
VAPB-204ENST00000475243 CSH1P0DML2 217 aa11.02□□□□□ -0.65
VAPB-204ENST00000475243 CSH2P0DML3 217 aa11.02□□□□□ -0.65
VAPB-204ENST00000475243 WASP42768 502 aa11.02□□□□□ -0.65
VAPB-204ENST00000475243 FMO1Q01740 532 aa11.02□□□□□ -0.65
VAPB-204ENST00000475243 USP4Q13107 963 aa11.02□□□□□ -0.65
VAPB-204ENST00000475243 INTS11Q5TA45 600 aaKnown RBP11.02□□□□□ -0.65
VAPB-204ENST00000475243 ALYREFQ86V81 257 aaKnown RBP11.02□□□□□ -0.65
VAPB-204ENST00000475243 PANX1Q96RD7 426 aa11.02□□□□□ -0.65
VAPB-204ENST00000475243 ZNF184Q99676 751 aaPredicted RBP11.02□□□□□ -0.65
VAPB-204ENST00000475243 FANCEQ9HB96 536 aa11.02□□□□□ -0.65
VAPB-204ENST00000475243 IMP3Q9NV31 184 aaKnown RBP11.02□□□□□ -0.65
VAPB-204ENST00000475243 KPNA4O00629 521 aaPredicted RBP11.01□□□□□ -0.65
VAPB-204ENST00000475243 MAFO75444 373 aaPredicted RBP11.01□□□□□ -0.65
VAPB-204ENST00000475243 CASP7P55210 303 aa11.01□□□□□ -0.65
VAPB-204ENST00000475243 FAIM2Q9BWQ8 316 aa11.01□□□□□ -0.65
VAPB-204ENST00000475243 SAR1AQ9NR31 198 aa11.01□□□□□ -0.65
VAPB-204ENST00000475243 AGO1Q9UL18 857 aaKnown RBP11.01□□□□□ -0.65
VAPB-204ENST00000475243 LRCH1Q9Y2L9 728 aa11.01□□□□□ -0.65
VAPB-204ENST00000475243 GMPPBQ9Y5P6 360 aa11.01□□□□□ -0.65
VAPB-204ENST00000475243 EPHB6O15197 1021 aa11.01□□□□□ -0.65
VAPB-204ENST00000475243 CST1P01037 141 aa11.01□□□□□ -0.65
VAPB-204ENST00000475243 CCNYL3P0C7X3 344 aa11.01□□□□□ -0.65
VAPB-204ENST00000475243 TAS2R40P59535 323 aa11.01□□□□□ -0.65
VAPB-204ENST00000475243 ECM1Q16610 540 aa11.01□□□□□ -0.65
VAPB-204ENST00000475243 ALG11Q2TAA5 492 aa11.01□□□□□ -0.65
VAPB-204ENST00000475243 NAIF1Q69YI7 327 aaPredicted RBP11.01□□□□□ -0.65
VAPB-204ENST00000475243 PAGE2Q7Z2X7 111 aa11.01□□□□□ -0.65
VAPB-204ENST00000475243 OR4A15Q8NGL6 344 aa11.01□□□□□ -0.65
VAPB-204ENST00000475243 OR4L1Q8NH43 312 aa11.01□□□□□ -0.65
VAPB-204ENST00000475243 VPS4AQ9UN37 437 aa11.01□□□□□ -0.65
VAPB-204ENST00000475243 NR2E3Q9Y5X4 410 aa11.01□□□□□ -0.65
VAPB-204ENST00000475243 SLIT1O75093 1534 aa11.01□□□□□ -0.65
VAPB-204ENST00000475243 CXCR2P25025 360 aa11.01□□□□□ -0.65
VAPB-204ENST00000475243 NRG1Q02297 640 aaPredicted RBP11.01□□□□□ -0.65
VAPB-204ENST00000475243 MEA1Q16626 185 aa11.01□□□□□ -0.65
VAPB-204ENST00000475243 FAAH2Q6GMR7 532 aa11.01□□□□□ -0.65
VAPB-204ENST00000475243 SPESP1Q6UW49 350 aa11.01□□□□□ -0.65
VAPB-204ENST00000475243 CLHC1Q8NHS4 586 aa11.01□□□□□ -0.65
VAPB-204ENST00000475243 CKAP2Q8WWK9 683 aa11.01□□□□□ -0.65
VAPB-204ENST00000475243 ZFRQ96KR1 1074 aaKnown RBP11.01□□□□□ -0.65
VAPB-204ENST00000475243 DEFB118Q96PH6 123 aa11.01□□□□□ -0.65
VAPB-204ENST00000475243 MMADHCQ9H3L0 296 aaPredicted RBP11.01□□□□□ -0.65
VAPB-204ENST00000475243 CERS4Q9HA82 394 aa11.01□□□□□ -0.65
VAPB-204ENST00000475243 FAM105AQ9NUU6 356 aa11.01□□□□□ -0.65
VAPB-204ENST00000475243 ANGPT4Q9Y264 503 aa11.01□□□□□ -0.65
VAPB-204ENST00000475243 MTF2Q9Y483 593 aaPredicted RBP11.01□□□□□ -0.65
VAPB-204ENST00000475243 C15orf38-AP3S2A0A0A6YYH1 394 aa11.01□□□□□ -0.65
VAPB-204ENST00000475243 PNMA8CA0A1B0GUJ8 204 aa11.01□□□□□ -0.65
VAPB-204ENST00000475243 CCDC85CA6NKD9 419 aa11.01□□□□□ -0.65
VAPB-204ENST00000475243 ATP5F1P24539 256 aaPredicted RBP11.01□□□□□ -0.65
VAPB-204ENST00000475243 HTR1BP28222 390 aa11.01□□□□□ -0.65
VAPB-204ENST00000475243 CLCN5P51795 746 aa11.01□□□□□ -0.65
VAPB-204ENST00000475243 CDH13P55290 713 aa11.01□□□□□ -0.65
VAPB-204ENST00000475243 RGS1Q08116 209 aa11.01□□□□□ -0.65
VAPB-204ENST00000475243 PACS1Q6VY07 963 aa11.01□□□□□ -0.65
VAPB-204ENST00000475243 GET4Q7L5D6 327 aaPredicted RBP11.01□□□□□ -0.65
VAPB-204ENST00000475243 ARPINQ7Z6K5 226 aa11.01□□□□□ -0.65
VAPB-204ENST00000475243 HIPK1Q86Z02 1210 aa11.01□□□□□ -0.65
VAPB-204ENST00000475243 HSFY1Q96LI6 401 aa11.01□□□□□ -0.65
VAPB-204ENST00000475243 KLF15Q9UIH9 416 aa11.01□□□□□ -0.65
VAPB-204ENST00000475243 A0A1W2PQH9 124 aa11.01□□□□□ -0.65
VAPB-204ENST00000475243 RGSL1A5PLK6 1076 aa11.01□□□□□ -0.65
VAPB-204ENST00000475243 FFAR2O15552 330 aa11.01□□□□□ -0.65
VAPB-204ENST00000475243 MAGEC1O60732 1142 aa11.01□□□□□ -0.65
VAPB-204ENST00000475243 PAGE1O75459 146 aa11.01□□□□□ -0.65
VAPB-204ENST00000475243 KHDRBS3O75525 346 aaKnown RBP11.01□□□□□ -0.65
VAPB-204ENST00000475243 ADH1AP07327 375 aa11.01□□□□□ -0.65
VAPB-204ENST00000475243 COX4I1P13073 169 aa11.01□□□□□ -0.65
VAPB-204ENST00000475243 MAP2K5Q13163 448 aa11.01□□□□□ -0.65
VAPB-204ENST00000475243 RPTNQ6XPR3 784 aa11.01□□□□□ -0.65
VAPB-204ENST00000475243 FAM220AQ7Z4H9 259 aa11.01□□□□□ -0.65
VAPB-204ENST00000475243 PNPT1Q8TCS8 783 aaKnown RBP11.01□□□□□ -0.65
VAPB-204ENST00000475243 STK32AQ8WU08 396 aa11.01□□□□□ -0.65
VAPB-204ENST00000475243 BAP1Q92560 729 aa11.01□□□□□ -0.65
VAPB-204ENST00000475243 UBE2E3Q969T4 207 aa11.01□□□□□ -0.65
VAPB-204ENST00000475243 OMA1Q96E52 524 aa11.01□□□□□ -0.65
VAPB-204ENST00000475243 OR52E6Q96RD3 313 aa11.01□□□□□ -0.65
VAPB-204ENST00000475243 SLC9A7Q96T83 725 aa11.01□□□□□ -0.65
VAPB-204ENST00000475243 MRPL57Q9BQC6 102 aaKnown RBP11.01□□□□□ -0.65
VAPB-204ENST00000475243 PTGFRNQ9P2B2 879 aa11.01□□□□□ -0.65
VAPB-204ENST00000475243 RPS6KA6Q9UK32 745 aa11.01□□□□□ -0.65
VAPB-204ENST00000475243 U3KQV3 271 aa11.01□□□□□ -0.65
VAPB-204ENST00000475243 OR10H3O60404 316 aa11.01□□□□□ -0.65
VAPB-204ENST00000475243 PSMG1O95456 288 aa11.01□□□□□ -0.65
VAPB-204ENST00000475243 PRKAR2AP13861 404 aaKnown RBP11.01□□□□□ -0.65
VAPB-204ENST00000475243 BMP7P18075 431 aa11.01□□□□□ -0.65
VAPB-204ENST00000475243 PSMD7P51665 324 aa11.01□□□□□ -0.65
VAPB-204ENST00000475243 SQLEQ14534 574 aa11.01□□□□□ -0.65
VAPB-204ENST00000475243 SF1Q15637 639 aaKnown RBP11.01□□□□□ -0.65
VAPB-204ENST00000475243 RFX4Q33E94 735 aa11.01□□□□□ -0.65
VAPB-204ENST00000475243 DCLRE1AQ6PJP8 1040 aa11.01□□□□□ -0.65
VAPB-204ENST00000475243 DEF8Q6ZN54 512 aa11.01□□□□□ -0.65
VAPB-204ENST00000475243 RTL3Q8N8U3 475 aaKnown RBP11.01□□□□□ -0.65
VAPB-204ENST00000475243 NELL1Q92832 810 aa11.01□□□□□ -0.65
VAPB-204ENST00000475243 KPNA5O15131 536 aa11□□□□□ -0.65
VAPB-204ENST00000475243 ERBB2P04626 1255 aa11□□□□□ -0.65
VAPB-204ENST00000475243 ITGA2BP08514 1039 aa11□□□□□ -0.65
VAPB-204ENST00000475243 SLC35G4P0C7Q5 338 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms