RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 D6RAR5 112 aa20.45■□□□□ 0.86
APP-215ENST00000474136 PLEKP08567 350 aaPredicted RBP20.45■□□□□ 0.86
APP-215ENST00000474136 WT1P19544 449 aaPredicted RBP20.45■□□□□ 0.86
APP-215ENST00000474136 NOS2P35228 1153 aa20.45■□□□□ 0.86
APP-215ENST00000474136 CXCR3P49682 368 aa20.45■□□□□ 0.86
APP-215ENST00000474136 CYP4F2P78329 520 aa20.45■□□□□ 0.86
APP-215ENST00000474136 PTK2BQ14289 1009 aa20.45■□□□□ 0.86
APP-215ENST00000474136 TBR1Q16650 682 aa20.45■□□□□ 0.86
APP-215ENST00000474136 RETSATQ6NUM9 610 aa20.45■□□□□ 0.86
APP-215ENST00000474136 ZNF574Q6ZN55 896 aaPredicted RBP20.45■□□□□ 0.86
APP-215ENST00000474136 C1orf131Q8NDD1 294 aaKnown RBP20.45■□□□□ 0.86
APP-215ENST00000474136 SLC30A5Q8TAD4 765 aa20.45■□□□□ 0.86
APP-215ENST00000474136 ASB12Q8WXK4 309 aa20.45■□□□□ 0.86
APP-215ENST00000474136 TBATAQ96M53 351 aa20.45■□□□□ 0.86
APP-215ENST00000474136 GFM1Q96RP9 751 aaKnown RBP20.45■□□□□ 0.86
APP-215ENST00000474136 NPY6RQ99463 290 aa20.45■□□□□ 0.86
APP-215ENST00000474136 HECAQ9UBI9 543 aaPredicted RBP20.45■□□□□ 0.86
APP-215ENST00000474136 CD160O95971 181 aa20.44■□□□□ 0.86
APP-215ENST00000474136 RPLP0P05388 317 aaKnown RBP20.44■□□□□ 0.86
APP-215ENST00000474136 CCDC175P0C221 793 aa20.44■□□□□ 0.86
APP-215ENST00000474136 LIPCP11150 499 aa20.44■□□□□ 0.86
APP-215ENST00000474136 INHBCP55103 352 aa20.44■□□□□ 0.86
APP-215ENST00000474136 EIF3IQ13347 325 aaKnown RBP20.44■□□□□ 0.86
APP-215ENST00000474136 LRRC73Q5JTD7 316 aa20.44■□□□□ 0.86
APP-215ENST00000474136 BRMS1LQ5PSV4 323 aa20.44■□□□□ 0.86
APP-215ENST00000474136 LRRC31Q6UY01 552 aa20.44■□□□□ 0.86
APP-215ENST00000474136 RAD9BQ6WBX8 426 aa20.44■□□□□ 0.86
APP-215ENST00000474136 SLC26A9Q7LBE3 791 aa20.44■□□□□ 0.86
APP-215ENST00000474136 ZSCAN30Q86W11 494 aa20.44■□□□□ 0.86
APP-215ENST00000474136 ARL10Q8N8L6 244 aa20.44■□□□□ 0.86
APP-215ENST00000474136 PCDH19Q8TAB3 1148 aa20.44■□□□□ 0.86
APP-215ENST00000474136 CPEB1Q9BZB8 566 aaKnown RBP20.44■□□□□ 0.86
APP-215ENST00000474136 STRADBQ9C0K7 418 aa20.44■□□□□ 0.86
APP-215ENST00000474136 ATP13A1Q9HD20 1204 aa20.44■□□□□ 0.86
APP-215ENST00000474136 MBNL1Q9NR56 388 aaKnown RBP20.44■□□□□ 0.86
APP-215ENST00000474136 SEPT11Q9NVA2 429 aaKnown RBP20.44■□□□□ 0.86
APP-215ENST00000474136 ZNF212Q9UDV6 495 aa20.44■□□□□ 0.86
APP-215ENST00000474136 ZKSCAN5Q9Y2L8 839 aa20.44■□□□□ 0.86
APP-215ENST00000474136 PCDHGA4Q9Y5G9 962 aa20.44■□□□□ 0.86
APP-215ENST00000474136 IGLV3-10A0A075B6K4 115 aa20.43■□□□□ 0.86
APP-215ENST00000474136 A0A087X0T9 212 aa20.43■□□□□ 0.86
APP-215ENST00000474136 ILVBLA1L0T0 632 aa20.43■□□□□ 0.86
APP-215ENST00000474136 ZSCAN12O43309 604 aa20.43■□□□□ 0.86
APP-215ENST00000474136 SRGAP2O75044 1071 aa20.43■□□□□ 0.86
APP-215ENST00000474136 MMEP08473 750 aa20.43■□□□□ 0.86
APP-215ENST00000474136 JMJD7P0C870 316 aa20.43■□□□□ 0.86
APP-215ENST00000474136 FAM228BP0C875 321 aa20.43■□□□□ 0.86
APP-215ENST00000474136 CHRNB2P17787 502 aa20.43■□□□□ 0.86
APP-215ENST00000474136 ITIH1P19827 911 aa20.43■□□□□ 0.86
APP-215ENST00000474136 SULT1E1P49888 294 aa20.43■□□□□ 0.86
APP-215ENST00000474136 SNX16P57768 344 aa20.43■□□□□ 0.86
APP-215ENST00000474136 RNASE9P60153 205 aaKnown RBP20.43■□□□□ 0.86
APP-215ENST00000474136 FMO1Q01740 532 aa20.43■□□□□ 0.86
APP-215ENST00000474136 SLC6A3Q01959 620 aa20.43■□□□□ 0.86
APP-215ENST00000474136 PPARDQ03181 441 aa20.43■□□□□ 0.86
APP-215ENST00000474136 PTPN20Q4JDL3 420 aa20.43■□□□□ 0.86
APP-215ENST00000474136 TAF3Q5VWG9 929 aa20.43■□□□□ 0.86
APP-215ENST00000474136 ALKBH5Q6P6C2 394 aaKnown RBP20.43■□□□□ 0.86
APP-215ENST00000474136 NYAP1Q6ZVC0 841 aa20.43■□□□□ 0.86
APP-215ENST00000474136 ZFAND4Q86XD8 727 aa20.43■□□□□ 0.86
APP-215ENST00000474136 RYBPQ8N488 228 aaPredicted RBP20.43■□□□□ 0.86
APP-215ENST00000474136 TMEM35BQ8NCS4 154 aa20.43■□□□□ 0.86
APP-215ENST00000474136 SLC20A1Q8WUM9 679 aa20.43■□□□□ 0.86
APP-215ENST00000474136 VOPP1Q96AW1 172 aa20.43■□□□□ 0.86
APP-215ENST00000474136 SEMA3CQ99985 751 aa20.43■□□□□ 0.86
APP-215ENST00000474136 DOLKQ9UPQ8 538 aa20.43■□□□□ 0.86
APP-215ENST00000474136 LOXL2Q9Y4K0 774 aa20.43■□□□□ 0.86
APP-215ENST00000474136 PRAMEF33A0A0G2JMD5 474 aa20.42■□□□□ 0.86
APP-215ENST00000474136 DDX3XO00571 662 aaKnown RBP eCLIP20.42■□□□□ 0.866e-27■■■■□ 24.2
APP-215ENST00000474136 NVLO15381 856 aaKnown RBP20.42■□□□□ 0.86
APP-215ENST00000474136 PRAMEF10O60809 474 aa20.42■□□□□ 0.86
APP-215ENST00000474136 MMP20O60882 483 aa20.42■□□□□ 0.86
APP-215ENST00000474136 TLE1Q04724 770 aa20.42■□□□□ 0.86
APP-215ENST00000474136 SLC20A2Q08357 652 aa20.42■□□□□ 0.86
APP-215ENST00000474136 CLCA4Q14CN2 919 aa20.42■□□□□ 0.86
APP-215ENST00000474136 ZNF805Q5CZA5 627 aa20.42■□□□□ 0.86
APP-215ENST00000474136 MANEAQ5SRI9 462 aa20.42■□□□□ 0.86
APP-215ENST00000474136 CCDC122Q5T0U0 273 aa20.42■□□□□ 0.86
APP-215ENST00000474136 MACC1Q6ZN28 852 aa20.42■□□□□ 0.86
APP-215ENST00000474136 MSANTD4Q8NCY6 345 aa20.42■□□□□ 0.86
APP-215ENST00000474136 HTR3CQ8WXA8 447 aa20.42■□□□□ 0.86
APP-215ENST00000474136 RAB7BQ96AH8 199 aa20.42■□□□□ 0.86
APP-215ENST00000474136 ANKMY1Q9P2S6 941 aa20.42■□□□□ 0.86
APP-215ENST00000474136 INTUQ9ULD6 942 aa20.42■□□□□ 0.86
APP-215ENST00000474136 CYP1A1P04798 512 aaPredicted RBP20.41■□□□□ 0.86
APP-215ENST00000474136 UGT2B4P06133 528 aa20.41■□□□□ 0.86
APP-215ENST00000474136 ITIH2P19823 946 aa20.41■□□□□ 0.86
APP-215ENST00000474136 CCKBRP32239 447 aa20.41■□□□□ 0.86
APP-215ENST00000474136 CDH5P33151 784 aaPredicted RBP20.41■□□□□ 0.86
APP-215ENST00000474136 ACVRL1P37023 503 aa20.41■□□□□ 0.86
APP-215ENST00000474136 ETV5P41161 510 aa20.41■□□□□ 0.86
APP-215ENST00000474136 GNA12Q03113 381 aa20.41■□□□□ 0.86
APP-215ENST00000474136 DEUP1Q05D60 604 aa20.41■□□□□ 0.86
APP-215ENST00000474136 HID1Q8IV36 788 aa20.41■□□□□ 0.86
APP-215ENST00000474136 TSACCQ96A04 125 aaPredicted RBP20.41■□□□□ 0.86
APP-215ENST00000474136 TRIM11Q96F44 468 aa20.41■□□□□ 0.86
APP-215ENST00000474136 C1orf74Q96LT6 269 aa20.41■□□□□ 0.86
APP-215ENST00000474136 TBCBQ99426 244 aa20.41■□□□□ 0.86
APP-215ENST00000474136 LRRN3Q9H3W5 708 aa20.41■□□□□ 0.86
APP-215ENST00000474136 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.41■□□□□ 0.864e-7■□□□□ 9.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms