RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 CASP3P42574 277 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 CPA2P48052 419 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 HARS2P49590 506 aaKnown RBP5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 RELQ04864 619 aaPredicted RBP5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 ENPEPQ07075 957 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 GK3PQ14409 553 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 TAF12Q16514 161 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 ASIC2Q16515 512 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 CYP1B1Q16678 543 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 FAM83BQ5T0W9 1011 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 RSBN1Q5VWQ0 802 aaPredicted RBP5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 ATG16L1Q676U5 607 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 ABHD17CQ6PCB6 329 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 RHBDF2Q6PJF5 856 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 FOXR2Q6PJQ5 311 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 SYDE1Q6ZW31 735 aaPredicted RBP5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 HDDC2Q7Z4H3 204 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 CDH26Q8IXH8 852 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 CCNYL1Q8N7R7 359 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 ARRDC4Q8NCT1 418 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 LINC00116Q8NCU8 138 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 TGFBRAP1Q8WUH2 860 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 FIG4Q92562 907 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 PIK3R3Q92569 461 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 STAMQ92783 540 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 SLCO2A1Q92959 643 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 PHKBQ93100 1093 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 SH3YL1Q96HL8 342 aaPredicted RBP5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 WRNIP1Q96S55 665 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 HEMGNQ9BXL5 484 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 WWP1Q9H0M0 922 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 TMEM168Q9H0V1 697 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 GOLPH3Q9H4A6 298 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 MAGEF1Q9HAY2 307 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 RAVER2Q9HCJ3 691 aaKnown RBP5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 DTLQ9NZJ0 730 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 ZNF221Q9UK13 617 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 PA2G4Q9UQ80 394 aaKnown RBP5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 RNF11Q9Y3C5 154 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 NR2E1Q9Y466 385 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 PCDHA8Q9Y5H6 950 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 CACNG2Q9Y698 323 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 ARHGEF37A1IGU5 675 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 WASH4PA8MWX3 477 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 HNRNPCL2B2RXH8 293 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 ARVCFO00192 962 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 TOR1AO14656 332 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 RPS17P08708 135 aaKnown RBP5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 ZNF3P17036 446 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 AOC1P19801 751 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 RRM1P23921 792 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 AXLP30530 894 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 RPA3P35244 121 aaPredicted RBP5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 IDUAP35475 653 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 LTBRP36941 435 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 GP5P40197 560 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 TSPAN7P41732 249 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 SEPHS1P49903 392 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 ARL4CP56559 192 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 ATP2C1P98194 919 aaPredicted RBP5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 CD83Q01151 205 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 NFIAQ12857 509 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 TRAF2Q12933 501 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 PDK1Q15118 436 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 SLC1A5Q15758 541 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 PGS1Q32NB8 556 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 Q3ZCU0 254 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 ODR4Q5SWX8 454 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 EEF1DP3Q658K8 133 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 ARL6IP4Q66PJ3 421 aaKnown RBP5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 ANKRD40Q6AI12 368 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 UBE2R2Q712K3 238 aaPredicted RBP5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 LIMS2Q7Z4I7 341 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 FAM124AQ86V42 546 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 CHSY1Q86X52 802 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 SPACA3Q8IXA5 215 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 PM20D2Q8IYS1 436 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 SNX31Q8N9S9 440 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 PSD4Q8NDX1 1056 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 LRRC20Q8TCA0 184 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 SLC44A1Q8WWI5 657 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 EDC3Q96F86 508 aaKnown RBP5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 PRR11Q96HE9 360 aaPredicted RBP5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 ZNF578Q96N58 590 aaPredicted RBP5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 KCNK16Q96T55 309 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 WACQ9BTA9 647 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 TTPALQ9BTX7 342 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 BTBD2Q9BX70 525 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 PITHD1Q9GZP4 211 aaPredicted RBP5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 MANSC1Q9H8J5 431 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 ERVMER34-1Q9H9K5 563 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 NANOGQ9H9S0 305 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 GPN2Q9H9Y4 310 aaPredicted RBP5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 ERVK-5Q9HDB9 667 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 CHST12Q9NRB3 414 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 OLAHQ9NV23 265 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 PPP1R14DQ9NXH3 145 aa5.18□□□□□ -1.58
TMEM39A-206ENST00000473684 NINJ2Q9NZG7 142 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms