RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 MAPK10P53779 464 aa9.7□□□□□ -0.86
MCF2L-223ENST00000473345 MAZP56270 477 aaKnown RBP9.7□□□□□ -0.86
MCF2L-223ENST00000473345 NRG1Q02297 640 aaPredicted RBP9.7□□□□□ -0.86
MCF2L-223ENST00000473345 PTP4A2Q12974 167 aa9.7□□□□□ -0.86
MCF2L-223ENST00000473345 MTA1Q13330 715 aa9.7□□□□□ -0.86
MCF2L-223ENST00000473345 PTK2BQ14289 1009 aa9.7□□□□□ -0.86
MCF2L-223ENST00000473345 HLTFQ14527 1009 aaKnown RBP eCLIP9.7□□□□□ -0.86
MCF2L-223ENST00000473345 NFATC4Q14934 902 aa9.7□□□□□ -0.86
MCF2L-223ENST00000473345 PTPRRQ15256 657 aa9.7□□□□□ -0.86
MCF2L-223ENST00000473345 CERCAMQ5T4B2 595 aa9.7□□□□□ -0.86
MCF2L-223ENST00000473345 NAA35Q5VZE5 725 aa9.7□□□□□ -0.86
MCF2L-223ENST00000473345 ESRP1Q6NXG1 681 aaKnown RBP9.7□□□□□ -0.86
MCF2L-223ENST00000473345 ATG14Q6ZNE5 492 aa9.7□□□□□ -0.86
MCF2L-223ENST00000473345 NRROSQ86YC3 692 aa9.7□□□□□ -0.86
MCF2L-223ENST00000473345 RCBTB1Q8NDN9 531 aa9.7□□□□□ -0.86
MCF2L-223ENST00000473345 PATE1Q8WXA2 126 aa9.7□□□□□ -0.86
MCF2L-223ENST00000473345 RXFP2Q8WXD0 754 aa9.7□□□□□ -0.86
MCF2L-223ENST00000473345 HMCESQ96FZ2 354 aa9.7□□□□□ -0.86
MCF2L-223ENST00000473345 SEMA3CQ99985 751 aa9.7□□□□□ -0.86
MCF2L-223ENST00000473345 NUDT22Q9BRQ3 303 aa9.7□□□□□ -0.86
MCF2L-223ENST00000473345 TTYH3Q9C0H2 523 aa9.7□□□□□ -0.86
MCF2L-223ENST00000473345 SYNCQ9H7C4 482 aa9.7□□□□□ -0.86
MCF2L-223ENST00000473345 PCDH12Q9NPG4 1184 aa9.7□□□□□ -0.86
MCF2L-223ENST00000473345 SPATS2LQ9NUQ6 558 aaKnown RBP9.7□□□□□ -0.86
MCF2L-223ENST00000473345 TMEM9Q9P0T7 183 aa9.7□□□□□ -0.86
MCF2L-223ENST00000473345 ANKMY1Q9P2S6 941 aa9.7□□□□□ -0.86
MCF2L-223ENST00000473345 HEMK1Q9Y5R4 338 aaPredicted RBP9.7□□□□□ -0.86
MCF2L-223ENST00000473345 GTPBP10A4D1E9 387 aaKnown RBP9.69□□□□□ -0.86
MCF2L-223ENST00000473345 C2CD4BA6NLJ0 364 aa9.69□□□□□ -0.86
MCF2L-223ENST00000473345 ANKRD36A6QL64 1941 aa9.69□□□□□ -0.86
MCF2L-223ENST00000473345 RIOK3O14730 519 aaKnown RBP9.69□□□□□ -0.86
MCF2L-223ENST00000473345 BUB1O43683 1085 aa9.69□□□□□ -0.86
MCF2L-223ENST00000473345 SPTA1P02549 2419 aa9.69□□□□□ -0.86
MCF2L-223ENST00000473345 JMJD7P0C870 316 aa9.69□□□□□ -0.86
MCF2L-223ENST00000473345 FGF3P11487 239 aaPredicted RBP9.69□□□□□ -0.86
MCF2L-223ENST00000473345 PTMSP20962 102 aa9.69□□□□□ -0.86
MCF2L-223ENST00000473345 CSF2RBP32927 897 aa9.69□□□□□ -0.86
MCF2L-223ENST00000473345 MMP12P39900 470 aa9.69□□□□□ -0.86
MCF2L-223ENST00000473345 KLK7P49862 253 aa9.69□□□□□ -0.86
MCF2L-223ENST00000473345 LIG3P49916 1009 aa9.69□□□□□ -0.86
MCF2L-223ENST00000473345 OR1D5P58170 312 aa9.69□□□□□ -0.86
MCF2L-223ENST00000473345 LRRC14Q15048 493 aa9.69□□□□□ -0.86
MCF2L-223ENST00000473345 SDK2Q58EX2 2172 aa9.69□□□□□ -0.86
MCF2L-223ENST00000473345 HSP90AA4PQ58FG1 418 aa9.69□□□□□ -0.86
MCF2L-223ENST00000473345 MANEAQ5SRI9 462 aa9.69□□□□□ -0.86
MCF2L-223ENST00000473345 RWDD4Q6NW29 188 aaKnown RBP9.69□□□□□ -0.86
MCF2L-223ENST00000473345 LVRNQ6Q4G3 990 aa9.69□□□□□ -0.86
MCF2L-223ENST00000473345 CAMK1DQ8IU85 385 aa9.69□□□□□ -0.86
MCF2L-223ENST00000473345 ZDHHC17Q8IUH5 632 aa9.69□□□□□ -0.86
MCF2L-223ENST00000473345 CREBRFQ8IUR6 639 aa9.69□□□□□ -0.86
MCF2L-223ENST00000473345 FSTL5Q8N475 847 aaPredicted RBP9.69□□□□□ -0.86
MCF2L-223ENST00000473345 TMEM35BQ8NCS4 154 aa9.69□□□□□ -0.86
MCF2L-223ENST00000473345 SLC30A5Q8TAD4 765 aa9.69□□□□□ -0.86
MCF2L-223ENST00000473345 WDR48Q8TAF3 677 aa9.69□□□□□ -0.86
MCF2L-223ENST00000473345 EPS8L1Q8TE68 723 aa9.69□□□□□ -0.86
MCF2L-223ENST00000473345 CXorf40AQ8TE69 158 aa9.69□□□□□ -0.86
MCF2L-223ENST00000473345 CENPIQ92674 756 aaPredicted RBP9.69□□□□□ -0.86
MCF2L-223ENST00000473345 PCDHB18PQ96TA0 734 aa9.69□□□□□ -0.86
MCF2L-223ENST00000473345 PDFQ9HBH1 243 aa9.69□□□□□ -0.86
MCF2L-223ENST00000473345 GEMIN8Q9NWZ8 242 aaKnown RBP9.69□□□□□ -0.86
MCF2L-223ENST00000473345 DKK3Q9UBP4 350 aa9.69□□□□□ -0.86
MCF2L-223ENST00000473345 NOCTQ9UK39 431 aaKnown RBP9.69□□□□□ -0.86
MCF2L-223ENST00000473345 APPL1Q9UKG1 709 aa9.69□□□□□ -0.86
MCF2L-223ENST00000473345 MFHAS1Q9Y4C4 1052 aa9.69□□□□□ -0.86
MCF2L-223ENST00000473345 TLN1Q9Y490 2541 aaKnown RBP9.68□□□□□ -0.86
MCF2L-223ENST00000473345 A0A0U1RQS6 177 aa9.68□□□□□ -0.86
MCF2L-223ENST00000473345 B4DGG1 531 aa9.68□□□□□ -0.86
MCF2L-223ENST00000473345 GOLGA6L22H0YM25 854 aa9.68□□□□□ -0.86
MCF2L-223ENST00000473345 J3KR12 359 aa9.68□□□□□ -0.86
MCF2L-223ENST00000473345 K7EM74 188 aa9.68□□□□□ -0.86
MCF2L-223ENST00000473345 EPHB6O15197 1021 aa9.68□□□□□ -0.86
MCF2L-223ENST00000473345 DUX1O43812 170 aa9.68□□□□□ -0.86
MCF2L-223ENST00000473345 RAMP2O60895 175 aa9.68□□□□□ -0.86
MCF2L-223ENST00000473345 RASGRP1O95267 797 aa9.68□□□□□ -0.86
MCF2L-223ENST00000473345 PLEKP08567 350 aaPredicted RBP9.68□□□□□ -0.86
MCF2L-223ENST00000473345 CTSEP14091 401 aa9.68□□□□□ -0.86
MCF2L-223ENST00000473345 LIFP15018 202 aa9.68□□□□□ -0.86
MCF2L-223ENST00000473345 MAPKAPK2P49137 400 aa9.68□□□□□ -0.86
MCF2L-223ENST00000473345 PEX5P50542 639 aa9.68□□□□□ -0.86
MCF2L-223ENST00000473345 SNRPD1P62314 119 aaKnown RBP9.68□□□□□ -0.86
MCF2L-223ENST00000473345 EIF3IQ13347 325 aaKnown RBP9.68□□□□□ -0.86
MCF2L-223ENST00000473345 POLD3Q15054 466 aaPredicted RBP9.68□□□□□ -0.86
MCF2L-223ENST00000473345 AGERQ15109 404 aa9.68□□□□□ -0.86
MCF2L-223ENST00000473345 ELOCQ15369 112 aa9.68□□□□□ -0.86
MCF2L-223ENST00000473345 UGP2Q16851 508 aa9.68□□□□□ -0.86
MCF2L-223ENST00000473345 EFHC2Q5JST6 749 aa9.68□□□□□ -0.86
MCF2L-223ENST00000473345 KLHDC7AQ5VTJ3 777 aa9.68□□□□□ -0.86
MCF2L-223ENST00000473345 NKAIN2Q5VXU1 208 aa9.68□□□□□ -0.86
MCF2L-223ENST00000473345 SPECC1LQ69YQ0 1117 aa9.68□□□□□ -0.86
MCF2L-223ENST00000473345 ZSCAN30Q86W11 494 aa9.68□□□□□ -0.86
MCF2L-223ENST00000473345 C17orf82Q86X59 251 aaPredicted RBP9.68□□□□□ -0.86
MCF2L-223ENST00000473345 TP53INP2Q8IXH6 220 aa9.68□□□□□ -0.86
MCF2L-223ENST00000473345 GLMNQ92990 594 aa9.68□□□□□ -0.86
MCF2L-223ENST00000473345 NKD1Q969G9 470 aa9.68□□□□□ -0.86
MCF2L-223ENST00000473345 WDR92Q96MX6 357 aa9.68□□□□□ -0.86
MCF2L-223ENST00000473345 GDAP1L1Q96MZ0 367 aa9.68□□□□□ -0.86
MCF2L-223ENST00000473345 TMEM74Q96NL1 305 aa9.68□□□□□ -0.86
MCF2L-223ENST00000473345 OSBPL1AQ9BXW6 950 aa9.68□□□□□ -0.86
MCF2L-223ENST00000473345 SLC25A18Q9H1K4 315 aa9.68□□□□□ -0.86
MCF2L-223ENST00000473345 MAGEH1Q9H213 219 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms