RNA–Protein interactions for RNA: ENST00000473177.1

LRCH3-214, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 520 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-214ENST00000473177 SKA1Q96BD8 255 aa4.99□□□□□ -1.61
LRCH3-214ENST00000473177 MFSD3Q96ES6 412 aa4.99□□□□□ -1.61
LRCH3-214ENST00000473177 TRMT2BQ96GJ1 504 aaKnown RBP4.99□□□□□ -1.61
LRCH3-214ENST00000473177 C9orf72Q96LT7 481 aa4.99□□□□□ -1.61
LRCH3-214ENST00000473177 NECTIN4Q96NY8 510 aa4.99□□□□□ -1.61
LRCH3-214ENST00000473177 ZNF577Q9BSK1 485 aa4.99□□□□□ -1.61
LRCH3-214ENST00000473177 NAT9Q9BTE0 207 aa4.99□□□□□ -1.61
LRCH3-214ENST00000473177 EFHD1Q9BUP0 239 aa4.99□□□□□ -1.61
LRCH3-214ENST00000473177 STRA6Q9BX79 667 aa4.99□□□□□ -1.61
LRCH3-214ENST00000473177 TMEM120AQ9BXJ8 343 aa4.99□□□□□ -1.61
LRCH3-214ENST00000473177 MRPS26Q9BYN8 205 aaKnown RBP4.99□□□□□ -1.61
LRCH3-214ENST00000473177 GPR88Q9GZN0 384 aa4.99□□□□□ -1.61
LRCH3-214ENST00000473177 FAM124BQ9H5Z6 455 aaPredicted RBP4.99□□□□□ -1.61
LRCH3-214ENST00000473177 NRDE2Q9H7Z3 1164 aa4.99□□□□□ -1.61
LRCH3-214ENST00000473177 PNPLA8Q9NP80 782 aa4.99□□□□□ -1.61
LRCH3-214ENST00000473177 EURLQ9NYK6 297 aa4.99□□□□□ -1.61
LRCH3-214ENST00000473177 TAS2R1Q9NYW7 299 aa4.99□□□□□ -1.61
LRCH3-214ENST00000473177 HSPBP1Q9NZL4 362 aa4.99□□□□□ -1.61
LRCH3-214ENST00000473177 NKX1-2Q9UD57 310 aaPredicted RBP4.99□□□□□ -1.61
LRCH3-214ENST00000473177 DCDC2Q9UHG0 476 aa4.99□□□□□ -1.61
LRCH3-214ENST00000473177 ITGA11Q9UKX5 1188 aa4.99□□□□□ -1.61
LRCH3-214ENST00000473177 GRID1Q9ULK0 1009 aa4.99□□□□□ -1.61
LRCH3-214ENST00000473177 PRPF19Q9UMS4 504 aaKnown RBP4.99□□□□□ -1.61
LRCH3-214ENST00000473177 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.99□□□□□ -1.61
LRCH3-214ENST00000473177 DMTF1Q9Y222 760 aa4.99□□□□□ -1.61
LRCH3-214ENST00000473177 RNF114Q9Y508 228 aa4.99□□□□□ -1.61
LRCH3-214ENST00000473177 MAD1L1Q9Y6D9 718 aa4.99□□□□□ -1.61
LRCH3-214ENST00000473177 PTPRSQ13332 1948 aa4.99□□□□□ -1.61
LRCH3-214ENST00000473177 KMT2BQ9UMN6 2715 aaPredicted RBP4.98□□□□□ -1.61
LRCH3-214ENST00000473177 LOXHD1Q8IVV2 1947 aa4.98□□□□□ -1.61
LRCH3-214ENST00000473177 KRTAP4-8A0A0G2JLE6 195 aa4.98□□□□□ -1.61
LRCH3-214ENST00000473177 C17orf102A2RUQ5 167 aa4.98□□□□□ -1.61
LRCH3-214ENST00000473177 CCDC162PA2VCL2 907 aa4.98□□□□□ -1.61
LRCH3-214ENST00000473177 ARHGAP42A6NI28 874 aa4.98□□□□□ -1.61
LRCH3-214ENST00000473177 SIGLEC16A6NMB1 481 aa4.98□□□□□ -1.61
LRCH3-214ENST00000473177 A8MUI8 341 aa4.98□□□□□ -1.61
LRCH3-214ENST00000473177 FAM47E-STBD1D6RA91 191 aa4.98□□□□□ -1.61
LRCH3-214ENST00000473177 E7ESA3 106 aa4.98□□□□□ -1.61
LRCH3-214ENST00000473177 AP3B1O00203 1094 aa4.98□□□□□ -1.61
LRCH3-214ENST00000473177 NFIBO00712 420 aa4.98□□□□□ -1.61
LRCH3-214ENST00000473177 FCHO1O14526 889 aa4.98□□□□□ -1.61
LRCH3-214ENST00000473177 MEIS2O14770 477 aa4.98□□□□□ -1.61
LRCH3-214ENST00000473177 MCF2LO15068 1137 aa4.98□□□□□ -1.61
LRCH3-214ENST00000473177 CHADO15335 359 aa4.98□□□□□ -1.61
LRCH3-214ENST00000473177 ARIH2O95376 493 aa4.98□□□□□ -1.61
LRCH3-214ENST00000473177 CBX6O95503 412 aa4.98□□□□□ -1.61
LRCH3-214ENST00000473177 CLPTM1O96005 669 aa4.98□□□□□ -1.61
LRCH3-214ENST00000473177 F2P00734 622 aa4.98□□□□□ -1.61
LRCH3-214ENST00000473177 CYBBP04839 570 aa4.98□□□□□ -1.61
LRCH3-214ENST00000473177 ICAM1P05362 532 aa4.98□□□□□ -1.61
LRCH3-214ENST00000473177 DLDP09622 509 aaKnown RBP4.98□□□□□ -1.61
LRCH3-214ENST00000473177 THRAP10827 490 aa4.98□□□□□ -1.61
LRCH3-214ENST00000473177 HOXB8P17481 243 aaPredicted RBP4.98□□□□□ -1.61
LRCH3-214ENST00000473177 CHRNB2P17787 502 aa4.98□□□□□ -1.61
LRCH3-214ENST00000473177 VCLP18206 1134 aa4.98□□□□□ -1.61
LRCH3-214ENST00000473177 FPR2P25090 351 aa4.98□□□□□ -1.61
LRCH3-214ENST00000473177 CA8P35219 290 aa4.98□□□□□ -1.61
LRCH3-214ENST00000473177 CHKAP35790 457 aa4.98□□□□□ -1.61
LRCH3-214ENST00000473177 HADHAP40939 763 aa4.98□□□□□ -1.61
LRCH3-214ENST00000473177 GARSP41250 739 aaKnown RBP4.98□□□□□ -1.61
LRCH3-214ENST00000473177 QARSP47897 775 aaKnown RBP4.98□□□□□ -1.61
LRCH3-214ENST00000473177 GCLMP48507 274 aa4.98□□□□□ -1.61
LRCH3-214ENST00000473177 GALK1P51570 392 aa4.98□□□□□ -1.61
LRCH3-214ENST00000473177 COPAP53621 1224 aa4.98□□□□□ -1.61
LRCH3-214ENST00000473177 HDAC4P56524 1084 aa4.98□□□□□ -1.61
LRCH3-214ENST00000473177 TMPRSS15P98073 1019 aa4.98□□□□□ -1.61
LRCH3-214ENST00000473177 CYP4A11Q02928 519 aa4.98□□□□□ -1.61
LRCH3-214ENST00000473177 ZBTB17Q13105 803 aa4.98□□□□□ -1.61
LRCH3-214ENST00000473177 STX3Q13277 289 aa4.98□□□□□ -1.61
LRCH3-214ENST00000473177 DCTN2Q13561 401 aaKnown RBP4.98□□□□□ -1.61
LRCH3-214ENST00000473177 CAMK1Q14012 370 aa4.98□□□□□ -1.61
LRCH3-214ENST00000473177 PRKD1Q15139 912 aaPredicted RBP4.98□□□□□ -1.61
LRCH3-214ENST00000473177 DUSP6Q16828 381 aa4.98□□□□□ -1.61
LRCH3-214ENST00000473177 C21orf62-AS1Q17RA5 79 aa4.98□□□□□ -1.61
LRCH3-214ENST00000473177 LY6KQ17RY6 165 aa4.98□□□□□ -1.61
LRCH3-214ENST00000473177 INSCQ1MX18 579 aa4.98□□□□□ -1.61
LRCH3-214ENST00000473177 CNPY1Q3B7I2 92 aa4.98□□□□□ -1.61
LRCH3-214ENST00000473177 ACSBG2Q5FVE4 666 aa4.98□□□□□ -1.61
LRCH3-214ENST00000473177 RNF220Q5VTB9 566 aa4.98□□□□□ -1.61
LRCH3-214ENST00000473177 PLEKHA7Q6IQ23 1121 aa4.98□□□□□ -1.61
LRCH3-214ENST00000473177 ANKRD54Q6NXT1 300 aa4.98□□□□□ -1.61
LRCH3-214ENST00000473177 GJB7Q6PEY0 223 aa4.98□□□□□ -1.61
LRCH3-214ENST00000473177 C1orf228Q6PIY5 440 aa4.98□□□□□ -1.61
LRCH3-214ENST00000473177 USP17L6PQ6QN14 398 aa4.98□□□□□ -1.61
LRCH3-214ENST00000473177 IZUMO2Q6UXV1 221 aa4.98□□□□□ -1.61
LRCH3-214ENST00000473177 SEPT14Q6ZU15 432 aa4.98□□□□□ -1.61
LRCH3-214ENST00000473177 MIER3Q7Z3K6 550 aa4.98□□□□□ -1.61
LRCH3-214ENST00000473177 HAUS6Q7Z4H7 955 aa4.98□□□□□ -1.61
LRCH3-214ENST00000473177 DHDDSQ86SQ9 333 aa4.98□□□□□ -1.61
LRCH3-214ENST00000473177 SERINC5Q86VE9 423 aa4.98□□□□□ -1.61
LRCH3-214ENST00000473177 NUDCD3Q8IVD9 361 aa4.98□□□□□ -1.61
LRCH3-214ENST00000473177 AHI1Q8N157 1196 aa4.98□□□□□ -1.61
LRCH3-214ENST00000473177 CCDC33Q8N5R6 958 aa4.98□□□□□ -1.61
LRCH3-214ENST00000473177 NIPA2Q8N8Q9 360 aa4.98□□□□□ -1.61
LRCH3-214ENST00000473177 OR6Y1Q8NGX8 325 aa4.98□□□□□ -1.61
LRCH3-214ENST00000473177 SPPL3Q8TCT6 385 aa4.98□□□□□ -1.61
LRCH3-214ENST00000473177 TCP10LQ8TDR4 215 aa4.98□□□□□ -1.61
LRCH3-214ENST00000473177 FNIP1Q8TF40 1166 aa4.98□□□□□ -1.61
LRCH3-214ENST00000473177 FAM172AQ8WUF8 416 aa4.98□□□□□ -1.61
LRCH3-214ENST00000473177 SLC20A1Q8WUM9 679 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms