RNA–Protein interactions for RNA: ENST00000472911.1

SMTN-215, Transcript of smoothelin, humanhuman

TSL 2

Gene SMTN, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-215ENST00000472911 TRIM69Q86WT6 500 aa12.19□□□□□ -0.46
SMTN-215ENST00000472911 CNTD1Q8N815 330 aa12.19□□□□□ -0.46
SMTN-215ENST00000472911 TRIM58Q8NG06 486 aa12.19□□□□□ -0.46
SMTN-215ENST00000472911 ARRDC2Q8TBH0 407 aa12.19□□□□□ -0.46
SMTN-215ENST00000472911 ACTL9Q8TC94 416 aa12.19□□□□□ -0.46
SMTN-215ENST00000472911 HCAR2Q8TDS4 363 aa12.19□□□□□ -0.46
SMTN-215ENST00000472911 TFB1MQ8WVM0 346 aaKnown RBP12.19□□□□□ -0.46
SMTN-215ENST00000472911 ZCCHC14Q8WYQ9 949 aaKnown RBP12.19□□□□□ -0.46
SMTN-215ENST00000472911 RAB7BQ96AH8 199 aa12.19□□□□□ -0.46
SMTN-215ENST00000472911 ECHDC3Q96DC8 303 aa12.19□□□□□ -0.46
SMTN-215ENST00000472911 QKIQ96PU8 341 aaKnown RBP eCLIP12.19□□□□□ -0.46
SMTN-215ENST00000472911 SEMA3CQ99985 751 aa12.19□□□□□ -0.46
SMTN-215ENST00000472911 SCNM1Q9BWG6 230 aa12.19□□□□□ -0.46
SMTN-215ENST00000472911 POLR1EQ9GZS1 481 aaKnown RBP12.19□□□□□ -0.46
SMTN-215ENST00000472911 BRD8Q9H0E9 1235 aa12.19□□□□□ -0.46
SMTN-215ENST00000472911 MIR1-1HGQ9H1L0 117 aa12.19□□□□□ -0.46
SMTN-215ENST00000472911 AMACRQ9UHK6 382 aa12.19□□□□□ -0.46
SMTN-215ENST00000472911 ZFR2Q9UPR6 939 aaKnown RBP12.19□□□□□ -0.46
SMTN-215ENST00000472911 TTLL3Q9Y4R7 772 aa12.19□□□□□ -0.46
SMTN-215ENST00000472911 PCDHGC4Q9Y5F7 938 aa12.19□□□□□ -0.46
SMTN-215ENST00000472911 ASCC3Q8N3C0 2202 aaKnown RBP12.19□□□□□ -0.46
SMTN-215ENST00000472911 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.18□□□□□ -0.46
SMTN-215ENST00000472911 A0A1W2PQU0 124 aa12.18□□□□□ -0.46
SMTN-215ENST00000472911 TCRBV7S2A1N4TA0A589 114 aa12.18□□□□□ -0.46
SMTN-215ENST00000472911 PCNX2A6NKB5 2137 aa12.18□□□□□ -0.46
SMTN-215ENST00000472911 UPK3BL1B0FP48 263 aa12.18□□□□□ -0.46
SMTN-215ENST00000472911 UPK3BL2E5RIL1 263 aa12.18□□□□□ -0.46
SMTN-215ENST00000472911 AREL1O15033 823 aa12.18□□□□□ -0.46
SMTN-215ENST00000472911 HTRA2O43464 458 aaPredicted RBP12.18□□□□□ -0.46
SMTN-215ENST00000472911 TJP3O95049 919 aa12.18□□□□□ -0.46
SMTN-215ENST00000472911 PCDH8O95206 1070 aa12.18□□□□□ -0.46
SMTN-215ENST00000472911 PRKCGP05129 697 aa12.18□□□□□ -0.46
SMTN-215ENST00000472911 PTPN3P26045 913 aa12.18□□□□□ -0.46
SMTN-215ENST00000472911 CETN2P41208 172 aa12.18□□□□□ -0.46
SMTN-215ENST00000472911 IRX4P78413 519 aa12.18□□□□□ -0.46
SMTN-215ENST00000472911 NIPAL4Q0D2K0 466 aa12.18□□□□□ -0.46
SMTN-215ENST00000472911 KLF1Q13351 362 aaPredicted RBP12.18□□□□□ -0.46
SMTN-215ENST00000472911 RPS6KA1Q15418 735 aa12.18□□□□□ -0.46
SMTN-215ENST00000472911 UGP2Q16851 508 aa12.18□□□□□ -0.46
SMTN-215ENST00000472911 DUOXA1Q1HG43 343 aa12.18□□□□□ -0.46
SMTN-215ENST00000472911 ZNF284Q2VY69 593 aa12.18□□□□□ -0.46
SMTN-215ENST00000472911 TMEM259Q4ZIN3 620 aa12.18□□□□□ -0.46
SMTN-215ENST00000472911 HS1BP3Q53T59 392 aa12.18□□□□□ -0.46
SMTN-215ENST00000472911 TRIM61Q5EBN2 209 aa12.18□□□□□ -0.46
SMTN-215ENST00000472911 RALGPS1Q5JS13 557 aa12.18□□□□□ -0.46
SMTN-215ENST00000472911 CCDC181Q5TID7 509 aa12.18□□□□□ -0.46
SMTN-215ENST00000472911 SEL1L3Q68CR1 1132 aa12.18□□□□□ -0.46
SMTN-215ENST00000472911 NEK5Q6P3R8 708 aa12.18□□□□□ -0.46
SMTN-215ENST00000472911 SLC23A3Q6PIS1 610 aa12.18□□□□□ -0.46
SMTN-215ENST00000472911 BRAT1Q6PJG6 821 aa12.18□□□□□ -0.46
SMTN-215ENST00000472911 TTC7BQ86TV6 843 aa12.18□□□□□ -0.46
SMTN-215ENST00000472911 HORMAD1Q86X24 394 aa12.18□□□□□ -0.46
SMTN-215ENST00000472911 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.18□□□□□ -0.46
SMTN-215ENST00000472911 KLK6Q92876 244 aa12.18□□□□□ -0.46
SMTN-215ENST00000472911 FAM118BQ9BPY3 351 aa12.18□□□□□ -0.46
SMTN-215ENST00000472911 C10orf88Q9H8K7 445 aa12.18□□□□□ -0.46
SMTN-215ENST00000472911 CAPN10Q9HC96 672 aa12.18□□□□□ -0.46
SMTN-215ENST00000472911 FSCN3Q9NQT6 498 aa12.18□□□□□ -0.46
SMTN-215ENST00000472911 SEPT10Q9P0V9 454 aa12.18□□□□□ -0.46
SMTN-215ENST00000472911 SUSD2Q9UGT4 822 aa12.18□□□□□ -0.46
SMTN-215ENST00000472911 PYCARDQ9ULZ3 195 aa12.18□□□□□ -0.46
SMTN-215ENST00000472911 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.18□□□□□ -0.46
SMTN-215ENST00000472911 FREM2Q5SZK8 3169 aa12.18□□□□□ -0.46
SMTN-215ENST00000472911 CABIN1Q9Y6J0 2220 aa12.18□□□□□ -0.46
SMTN-215ENST00000472911 ADAMTS20P59510 1910 aa12.17□□□□□ -0.46
SMTN-215ENST00000472911 MAST4O15021 2626 aa12.17□□□□□ -0.46
SMTN-215ENST00000472911 A0A1B0GTW7 788 aa12.17□□□□□ -0.46
SMTN-215ENST00000472911 USP27XA6NNY8 438 aa12.17□□□□□ -0.46
SMTN-215ENST00000472911 C4orf47A7E2U8 309 aa12.17□□□□□ -0.46
SMTN-215ENST00000472911 HACD1B0YJ81 288 aa12.17□□□□□ -0.46
SMTN-215ENST00000472911 WNT9AO14904 365 aa12.17□□□□□ -0.46
SMTN-215ENST00000472911 KHNYNO15037 678 aaKnown RBP12.17□□□□□ -0.46
SMTN-215ENST00000472911 BCAT2O15382 392 aaPredicted RBP12.17□□□□□ -0.46
SMTN-215ENST00000472911 TSPAN6O43657 245 aa12.17□□□□□ -0.46
SMTN-215ENST00000472911 SOCS5O75159 536 aa12.17□□□□□ -0.46
SMTN-215ENST00000472911 NEBLO76041 1014 aa12.17□□□□□ -0.46
SMTN-215ENST00000472911 ZIC2O95409 532 aaPredicted RBP12.17□□□□□ -0.46
SMTN-215ENST00000472911 CFIP05156 583 aa12.17□□□□□ -0.46
SMTN-215ENST00000472911 MMP2P08253 660 aa12.17□□□□□ -0.46
SMTN-215ENST00000472911 SERPINF2P08697 491 aa12.17□□□□□ -0.46
SMTN-215ENST00000472911 GNSP15586 552 aa12.17□□□□□ -0.46
SMTN-215ENST00000472911 MSNP26038 577 aaKnown RBP12.17□□□□□ -0.46
SMTN-215ENST00000472911 SEMG2Q02383 582 aa12.17□□□□□ -0.46
SMTN-215ENST00000472911 WASHC5Q12768 1159 aa12.17□□□□□ -0.46
SMTN-215ENST00000472911 XRCC4Q13426 336 aa12.17□□□□□ -0.46
SMTN-215ENST00000472911 FGL2Q14314 439 aa12.17□□□□□ -0.46
SMTN-215ENST00000472911 SLC45A4Q5BKX6 768 aa12.17□□□□□ -0.46
SMTN-215ENST00000472911 CFAP58Q5T655 872 aa12.17□□□□□ -0.46
SMTN-215ENST00000472911 KIAA1161Q6NSJ0 714 aa12.17□□□□□ -0.46
SMTN-215ENST00000472911 RABEPKQ7Z6M1 372 aa12.17□□□□□ -0.46
SMTN-215ENST00000472911 PRPF39Q86UA1 669 aaKnown RBP12.17□□□□□ -0.46
SMTN-215ENST00000472911 CEP76Q8TAP6 659 aa12.17□□□□□ -0.46
SMTN-215ENST00000472911 SPOCK2Q92563 424 aa12.17□□□□□ -0.46
SMTN-215ENST00000472911 TRIM44Q96DX7 344 aaPredicted RBP12.17□□□□□ -0.46
SMTN-215ENST00000472911 SLC6A18Q96N87 628 aa12.17□□□□□ -0.46
SMTN-215ENST00000472911 AGAP3Q96P47 875 aa12.17□□□□□ -0.46
SMTN-215ENST00000472911 EDEM2Q9BV94 578 aa12.17□□□□□ -0.46
SMTN-215ENST00000472911 TLR10Q9BXR5 811 aa12.17□□□□□ -0.46
SMTN-215ENST00000472911 TM9SF3Q9HD45 589 aa12.17□□□□□ -0.46
SMTN-215ENST00000472911 PCDH12Q9NPG4 1184 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms