RNA–Protein interactions for RNA: ENST00000472479.1

UBE2F-220, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,458 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-220ENST00000472479 LRRC73Q5JTD7 316 aa10.6□□□□□ -0.71
UBE2F-220ENST00000472479 SIRPB2Q5JXA9 342 aa10.6□□□□□ -0.71
UBE2F-220ENST00000472479 RNASEH2BQ5TBB1 312 aaKnown RBP10.6□□□□□ -0.71
UBE2F-220ENST00000472479 CWF19L1Q69YN2 538 aaKnown RBP10.6□□□□□ -0.71
UBE2F-220ENST00000472479 PDIK1LQ8N165 341 aa10.6□□□□□ -0.71
UBE2F-220ENST00000472479 ZNF687Q8N1G0 1237 aa10.6□□□□□ -0.71
UBE2F-220ENST00000472479 CAMKK1Q8N5S9 505 aa10.6□□□□□ -0.71
UBE2F-220ENST00000472479 OR14C36Q8NHC7 312 aa10.6□□□□□ -0.71
UBE2F-220ENST00000472479 HCAR2Q8TDS4 363 aa10.6□□□□□ -0.71
UBE2F-220ENST00000472479 ARRDC3Q96B67 414 aa10.6□□□□□ -0.71
UBE2F-220ENST00000472479 MRGPRX1Q96LB2 322 aa10.6□□□□□ -0.71
UBE2F-220ENST00000472479 SRPK1Q96SB4 655 aaKnown RBP10.6□□□□□ -0.71
UBE2F-220ENST00000472479 GPR63Q9BZJ6 419 aa10.6□□□□□ -0.71
UBE2F-220ENST00000472479 MKRN2Q9H000 416 aaKnown RBP10.6□□□□□ -0.71
UBE2F-220ENST00000472479 EPHX3Q9H6B9 360 aa10.6□□□□□ -0.71
UBE2F-220ENST00000472479 XAB2Q9HCS7 855 aaKnown RBP10.6□□□□□ -0.71
UBE2F-220ENST00000472479 EIF2B3Q9NR50 452 aaKnown RBP10.6□□□□□ -0.71
UBE2F-220ENST00000472479 BFARQ9NZS9 450 aa10.6□□□□□ -0.71
UBE2F-220ENST00000472479 SAMD15Q9P1V8 674 aa10.6□□□□□ -0.71
UBE2F-220ENST00000472479 RPL26L1Q9UNX3 145 aaKnown RBP10.6□□□□□ -0.71
UBE2F-220ENST00000472479 KIAA1549LQ6ZVL6 1849 aa10.59□□□□□ -0.71
UBE2F-220ENST00000472479 TBC1D3DA0A087WVF3 549 aa10.59□□□□□ -0.71
UBE2F-220ENST00000472479 TBC1D3IA0A087WXS9 549 aa10.59□□□□□ -0.71
UBE2F-220ENST00000472479 TBC1D3EA0A087X179 549 aa10.59□□□□□ -0.71
UBE2F-220ENST00000472479 TBC1D3KA0A087X1G2 549 aa10.59□□□□□ -0.71
UBE2F-220ENST00000472479 TCRBV7S3A2A0A539 114 aa10.59□□□□□ -0.71
UBE2F-220ENST00000472479 TBC1D3FA6NER0 549 aaPredicted RBP10.59□□□□□ -0.71
UBE2F-220ENST00000472479 GOLGA8CPA6NN73 597 aa10.59□□□□□ -0.71
UBE2F-220ENST00000472479 UPK3BL1B0FP48 263 aa10.59□□□□□ -0.71
UBE2F-220ENST00000472479 TBC1D3LB9A6J9 549 aa10.59□□□□□ -0.71
UBE2F-220ENST00000472479 UPK3BL2E5RIL1 263 aa10.59□□□□□ -0.71
UBE2F-220ENST00000472479 SEC31AO94979 1220 aaKnown RBP10.59□□□□□ -0.71
UBE2F-220ENST00000472479 TBC1D3HP0C7X1 549 aa10.59□□□□□ -0.71
UBE2F-220ENST00000472479 PIRTP0C851 137 aa10.59□□□□□ -0.71
UBE2F-220ENST00000472479 TIMP2P16035 220 aa10.59□□□□□ -0.71
UBE2F-220ENST00000472479 GABRG2P18507 467 aa10.59□□□□□ -0.71
UBE2F-220ENST00000472479 NDUFV2P19404 249 aa10.59□□□□□ -0.71
UBE2F-220ENST00000472479 MCM3P25205 808 aa10.59□□□□□ -0.71
UBE2F-220ENST00000472479 ITGB7P26010 798 aa10.59□□□□□ -0.71
UBE2F-220ENST00000472479 CHRNA4P43681 627 aa10.59□□□□□ -0.71
UBE2F-220ENST00000472479 GRIA4P48058 902 aa10.59□□□□□ -0.71
UBE2F-220ENST00000472479 NPY2RP49146 381 aa10.59□□□□□ -0.71
UBE2F-220ENST00000472479 COPAP53621 1224 aa10.59□□□□□ -0.71
UBE2F-220ENST00000472479 SEMG2Q02383 582 aa10.59□□□□□ -0.71
UBE2F-220ENST00000472479 ELP6Q0PNE2 266 aa10.59□□□□□ -0.71
UBE2F-220ENST00000472479 CNTN1Q12860 1018 aa10.59□□□□□ -0.71
UBE2F-220ENST00000472479 MTM1Q13496 603 aa10.59□□□□□ -0.71
UBE2F-220ENST00000472479 OLIG2Q13516 323 aa10.59□□□□□ -0.71
UBE2F-220ENST00000472479 CUL1Q13616 776 aa10.59□□□□□ -0.71
UBE2F-220ENST00000472479 SLC1A5Q15758 541 aa10.59□□□□□ -0.71
UBE2F-220ENST00000472479 QPCTQ16769 361 aa10.59□□□□□ -0.71
UBE2F-220ENST00000472479 UGP2Q16851 508 aa10.59□□□□□ -0.71
UBE2F-220ENST00000472479 ERCC6LQ2NKX8 1250 aa10.59□□□□□ -0.71
UBE2F-220ENST00000472479 BBS9Q3SYG4 887 aa10.59□□□□□ -0.71
UBE2F-220ENST00000472479 DNAJC21Q5F1R6 531 aaKnown RBP10.59□□□□□ -0.71
UBE2F-220ENST00000472479 ANKRD22Q5VYY1 191 aa10.59□□□□□ -0.71
UBE2F-220ENST00000472479 TBC1D3GQ6DHY5 549 aa10.59□□□□□ -0.71
UBE2F-220ENST00000472479 TBC1D3CQ6IPX1 549 aa10.59□□□□□ -0.71
UBE2F-220ENST00000472479 MAMSTRQ6ZN01 415 aa10.59□□□□□ -0.71
UBE2F-220ENST00000472479 CEP128Q6ZU80 1094 aa10.59□□□□□ -0.71
UBE2F-220ENST00000472479 PARS2Q7L3T8 475 aaKnown RBP10.59□□□□□ -0.71
UBE2F-220ENST00000472479 KBTBD6Q86V97 674 aa10.59□□□□□ -0.71
UBE2F-220ENST00000472479 HOOK3Q86VS8 718 aa10.59□□□□□ -0.71
UBE2F-220ENST00000472479 TBC1D3Q8IZP1 549 aaPredicted RBP10.59□□□□□ -0.71
UBE2F-220ENST00000472479 FBXL6Q8N531 539 aa10.59□□□□□ -0.71
UBE2F-220ENST00000472479 GPR161Q8N6U8 529 aaKnown RBP10.59□□□□□ -0.71
UBE2F-220ENST00000472479 CXorf40AQ8TE69 158 aa10.59□□□□□ -0.71
UBE2F-220ENST00000472479 RAB7BQ96AH8 199 aa10.59□□□□□ -0.71
UBE2F-220ENST00000472479 FRMD8Q9BZ67 464 aaPredicted RBP10.59□□□□□ -0.71
UBE2F-220ENST00000472479 TPSD1Q9BZJ3 242 aa10.59□□□□□ -0.71
UBE2F-220ENST00000472479 EPC1Q9H2F5 836 aa10.59□□□□□ -0.71
UBE2F-220ENST00000472479 PABPC3Q9H361 631 aaKnown RBP10.59□□□□□ -0.71
UBE2F-220ENST00000472479 DKK3Q9UBP4 350 aa10.59□□□□□ -0.71
UBE2F-220ENST00000472479 MAD1L1Q9Y6D9 718 aa10.59□□□□□ -0.71
UBE2F-220ENST00000472479 COL4A2P08572 1712 aa10.59□□□□□ -0.71
UBE2F-220ENST00000472479 LOC285095A0A1B0GVY8 99 aa10.58□□□□□ -0.72
UBE2F-220ENST00000472479 FAM86C2PA6NEL3 165 aa10.58□□□□□ -0.72
UBE2F-220ENST00000472479 C2orf81A6NN90 581 aa10.58□□□□□ -0.72
UBE2F-220ENST00000472479 AXIN1O15169 862 aa10.58□□□□□ -0.72
UBE2F-220ENST00000472479 HTRA2O43464 458 aaPredicted RBP10.58□□□□□ -0.72
UBE2F-220ENST00000472479 LZTS3O60299 673 aaPredicted RBP10.58□□□□□ -0.72
UBE2F-220ENST00000472479 NDUFS2O75306 463 aa10.58□□□□□ -0.72
UBE2F-220ENST00000472479 ZNF217O75362 1048 aa10.58□□□□□ -0.72
UBE2F-220ENST00000472479 CRTAMO95727 393 aa10.58□□□□□ -0.72
UBE2F-220ENST00000472479 ALPIP09923 528 aa10.58□□□□□ -0.72
UBE2F-220ENST00000472479 ADRB3P13945 408 aa10.58□□□□□ -0.72
UBE2F-220ENST00000472479 OXTRP30559 389 aa10.58□□□□□ -0.72
UBE2F-220ENST00000472479 HNF1BP35680 557 aa10.58□□□□□ -0.72
UBE2F-220ENST00000472479 P2RY2P41231 377 aa10.58□□□□□ -0.72
UBE2F-220ENST00000472479 GRIA1P42261 906 aa10.58□□□□□ -0.72
UBE2F-220ENST00000472479 SUOXP51687 545 aa10.58□□□□□ -0.72
UBE2F-220ENST00000472479 DRG2P55039 364 aaKnown RBP10.58□□□□□ -0.72
UBE2F-220ENST00000472479 CSTF1Q05048 431 aaKnown RBP10.58□□□□□ -0.72
UBE2F-220ENST00000472479 LAMB3Q13751 1172 aa10.58□□□□□ -0.72
UBE2F-220ENST00000472479 KCNJ11Q14654 390 aa10.58□□□□□ -0.72
UBE2F-220ENST00000472479 POU6F1Q14863 301 aa10.58□□□□□ -0.72
UBE2F-220ENST00000472479 TRADDQ15628 312 aa10.58□□□□□ -0.72
UBE2F-220ENST00000472479 USP39Q53GS9 565 aaKnown RBP10.58□□□□□ -0.72
UBE2F-220ENST00000472479 KCTD11Q693B1 232 aa10.58□□□□□ -0.72
UBE2F-220ENST00000472479 HIBCHQ6NVY1 386 aaPredicted RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms