RNA–Protein interactions for RNA: ENST00000472441.1

TM4SF1-202, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2 BASIC

Gene TM4SF1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-202ENST00000472441 PRSS56P0CW18 603 aa4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 CCDC166P0CW27 439 aa4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 RAG1P15918 1043 aa4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 GJA1P17302 382 aa4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 HDCP19113 662 aa4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 CALB2P22676 271 aa4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 MPSTP25325 297 aa4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 HOXD9P28356 352 aaPredicted RBP4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 PMLP29590 882 aa4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 IDH3AP50213 366 aa4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 PLK1P53350 603 aa4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 EPHB3P54753 998 aa4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 DSG1Q02413 1049 aa4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 PTPRRQ15256 657 aa4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 FSCBQ5H9T9 825 aa4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 ADGRF1Q5T601 910 aa4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 RPS27LQ71UM5 84 aaKnown RBP4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 CNTN4Q8IWV2 1026 aa4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 SLC39A11Q8N1S5 342 aa4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 TDRD5Q8NAT2 981 aaKnown RBP4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 FAM13CQ8NE31 585 aa4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 GABPB2Q8TAK5 448 aaPredicted RBP4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 VWCEQ96DN2 955 aa4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 PHF21BQ96EK2 531 aa4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 PTCD3Q96EY7 689 aaKnown RBP4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 TOX2Q96NM4 488 aa4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 MIPEPQ99797 713 aa4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 TACO1Q9BSH4 297 aaKnown RBP4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 MCMBPQ9BTE3 642 aa4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 CADM1Q9BY67 442 aaKnown RBP4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 ILKAPQ9H0C8 392 aaPredicted RBP4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 COG4Q9H9E3 785 aa4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 MRM3Q9HC36 420 aaKnown RBP4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 GPAMQ9HCL2 828 aa4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 SCUBE2Q9NQ36 999 aa4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 MRPL17Q9NRX2 175 aaKnown RBP4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 OXSMQ9NWU1 459 aa4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 TAS2R1Q9NYW7 299 aa4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 SEPT3Q9UH03 358 aa4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 ANKRD6Q9Y2G4 727 aa4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 MICAL3Q7RTP6 2002 aa4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 UBA6A0AVT1 1052 aaPredicted RBP4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 E9PBE3 544 aa4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 TEX28O15482 410 aa4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 GSC2O15499 205 aa4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 LDB2O43679 373 aa4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 KDELR3O43731 214 aa4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 DLX3O60479 287 aa4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 KLHL41O60662 606 aa4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 KLHL2O95198 593 aa4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 PIGNO95427 931 aa4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 GOT2P00505 430 aaKnown RBP4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 PDHA1P08559 390 aa4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 SBK3P0C264 359 aa4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 MZF1P28698 734 aaPredicted RBP4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 CRABP2P29373 138 aa4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 SLC8A1P32418 973 aa4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 CYP4F8P98187 520 aa4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 POU4F1Q01851 419 aa4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 MSLNQ13421 630 aaPredicted RBP4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 DBN1Q16643 649 aa4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 LRRC26Q2I0M4 334 aa4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 SLC9B1Q4ZJI4 515 aa4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 ARL13AQ5H913 290 aaPredicted RBP4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 ACBD5Q5T8D3 534 aaPredicted RBP4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 HECTD2Q5U5R9 776 aa4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 LIPMQ5VYY2 423 aa4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 TPGS2Q68CL5 300 aa4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 NXNQ6DKJ4 435 aa4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 TPGS1Q6ZTW0 290 aa4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 TMC7Q7Z402 723 aa4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 MAVSQ7Z434 540 aa4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 CILP2Q8IUL8 1156 aa4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 CCDC117Q8IWD4 279 aaPredicted RBP4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 TEX9Q8N6V9 391 aa4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 EFHBQ8N7U6 833 aa4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 MAB21L3Q8N8X9 362 aa4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 LPCAT1Q8NF37 534 aa4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 FBXO27Q8NI29 283 aa4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 TTC8Q8TAM2 541 aa4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 EXT2Q93063 718 aa4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 PLD4Q96BZ4 506 aa4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 TMA16Q96EY4 203 aaKnown RBP4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 NSMCE3Q96MG7 304 aa4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 KLF16Q9BXK1 252 aaPredicted RBP4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 WDR55Q9H6Y2 383 aaPredicted RBP4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 PDFQ9HBH1 243 aa4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 ZNF334Q9HCZ1 680 aaPredicted RBP4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 BPIFA1Q9NP55 256 aa4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 LNPEPQ9UIQ6 1025 aa4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 MID2Q9UJV3 735 aa4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 TBX21Q9UL17 535 aa4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 VWA7Q9Y334 891 aa4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 MTF2Q9Y483 593 aaPredicted RBP4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 PCDHB12Q9Y5F1 795 aa4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 FREM2Q5SZK8 3169 aa4.89□□□□□ -1.63
TM4SF1-202ENST00000472441 A0A1B0GVM2 712 aa4.88□□□□□ -1.63
TM4SF1-202ENST00000472441 ABHD14A-ACY1A0A1B0GW23 586 aa4.88□□□□□ -1.63
TM4SF1-202ENST00000472441 CCDC162PA2VCL2 907 aa4.88□□□□□ -1.63
TM4SF1-202ENST00000472441 TCAF2A6NFQ2 919 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms