RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 GSDMCQ9BYG8 508 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 IRX2Q9BZI1 471 aaPredicted RBP8.62□□□□□ -1.03
CD47-204ENST00000471694 SEMA4BQ9NPR2 832 aaPredicted RBP8.62□□□□□ -1.03
CD47-204ENST00000471694 DUX4Q9UBX2 424 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 DERAQ9Y315 318 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 C2CD2Q9Y426 696 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 PCDHA3Q9Y5H8 950 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 GLYATL1P3A0A0U1RQE8 302 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 YDJCA8MPS7 323 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 H0YGN5 161 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 CDH16O75309 829 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 GJA1P17302 382 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 BUD31P41223 144 aaPredicted RBP8.62□□□□□ -1.03
CD47-204ENST00000471694 TPGS2Q68CL5 300 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 PDE12Q6L8Q7 609 aaKnown RBP8.62□□□□□ -1.03
CD47-204ENST00000471694 CAPN13Q6MZZ7 669 aaPredicted RBP8.62□□□□□ -1.03
CD47-204ENST00000471694 SLC30A9Q6PML9 568 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 DNAJC14Q6Y2X3 702 aaPredicted RBP8.62□□□□□ -1.03
CD47-204ENST00000471694 RINLQ6ZS11 566 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 C12orf66Q96MD2 445 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 LPIN3Q9BQK8 851 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 ZSWIM1Q9BR11 485 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 NSUN3Q9H649 340 aaKnown RBP8.62□□□□□ -1.03
CD47-204ENST00000471694 SOX13Q9UN79 622 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 ASB3Q9Y575 518 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 LMTK2Q8IWU2 1503 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 HYKKA2RU49 373 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 ARF4P18085 180 aaPredicted RBP8.62□□□□□ -1.03
CD47-204ENST00000471694 TACR2P21452 398 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 TPP2P29144 1249 aaPredicted RBP8.62□□□□□ -1.03
CD47-204ENST00000471694 RXRGP48443 463 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 NRLP54845 237 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 POLE2P56282 527 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 FGL2Q14314 439 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 DNAL1Q4LDG9 190 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 SLC9A4Q6AI14 798 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 FAM45BPQ6NSW5 357 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 TMPRSS11BQ86T26 416 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 SLC9A9Q8IVB4 645 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 TMEM192Q8IY95 271 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 TRMT2AQ8IZ69 625 aaKnown RBP8.62□□□□□ -1.03
CD47-204ENST00000471694 FAM45AQ8TCE6 357 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 HLA-CQ95604 372 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 NKD1Q969G9 470 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 NUS1Q96E22 293 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 RBM18Q96H35 190 aaKnown RBP8.62□□□□□ -1.03
CD47-204ENST00000471694 LIMD1Q9UGP4 676 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 A0A1W2PQ67 120 aa8.61□□□□□ -1.03
CD47-204ENST00000471694 RRP8O43159 456 aaKnown RBP8.61□□□□□ -1.03
CD47-204ENST00000471694 PRODHO43272 600 aa8.61□□□□□ -1.03
CD47-204ENST00000471694 SLC28A2O43868 658 aa8.61□□□□□ -1.03
CD47-204ENST00000471694 PROSCO94903 275 aa8.61□□□□□ -1.03
CD47-204ENST00000471694 INTS6LQ5JSJ4 861 aaKnown RBP8.61□□□□□ -1.03
CD47-204ENST00000471694 ATXN7L2Q5T6C5 722 aaPredicted RBP8.61□□□□□ -1.03
CD47-204ENST00000471694 VASH1Q7L8A9 365 aaPredicted RBP8.61□□□□□ -1.03
CD47-204ENST00000471694 JAZF1Q86VZ6 243 aa8.61□□□□□ -1.03
CD47-204ENST00000471694 SLC13A5Q86YT5 568 aaPredicted RBP8.61□□□□□ -1.03
CD47-204ENST00000471694 MAP4K3Q8IVH8 894 aa8.61□□□□□ -1.03
CD47-204ENST00000471694 UNC5BQ8IZJ1 945 aa8.61□□□□□ -1.03
CD47-204ENST00000471694 RBFAQ8N0V3 343 aa8.61□□□□□ -1.03
CD47-204ENST00000471694 SIDT2Q8NBJ9 832 aaKnown RBP8.61□□□□□ -1.03
CD47-204ENST00000471694 C3orf20Q8ND61 904 aa8.61□□□□□ -1.03
CD47-204ENST00000471694 KLHDC7BQ96G42 594 aa8.61□□□□□ -1.03
CD47-204ENST00000471694 RPL10LQ96L21 214 aaKnown RBP8.61□□□□□ -1.03
CD47-204ENST00000471694 NECTIN4Q96NY8 510 aa8.61□□□□□ -1.03
CD47-204ENST00000471694 CHP1Q99653 195 aa8.61□□□□□ -1.03
CD47-204ENST00000471694 EBNA1BP2Q99848 306 aaKnown RBP8.61□□□□□ -1.03
CD47-204ENST00000471694 MCOLN1Q9GZU1 580 aa8.61□□□□□ -1.03
CD47-204ENST00000471694 ADAM30Q9UKF2 790 aa8.61□□□□□ -1.03
CD47-204ENST00000471694 UBIAD1Q9Y5Z9 338 aa8.61□□□□□ -1.03
CD47-204ENST00000471694 EML1O00423 815 aa8.61□□□□□ -1.03
CD47-204ENST00000471694 NRP1O14786 923 aa8.61□□□□□ -1.03
CD47-204ENST00000471694 FFAR3O14843 346 aa8.61□□□□□ -1.03
CD47-204ENST00000471694 GPR42O15529 346 aa8.61□□□□□ -1.03
CD47-204ENST00000471694 USP12O75317 370 aa8.61□□□□□ -1.03
CD47-204ENST00000471694 HSMCR30P0CW71 290 aa8.61□□□□□ -1.03
CD47-204ENST00000471694 GDI2P50395 445 aaKnown RBP8.61□□□□□ -1.03
CD47-204ENST00000471694 FMR1Q06787 632 aaKnown RBP eCLIP8.61□□□□□ -1.03
CD47-204ENST00000471694 MYBPC2Q14324 1141 aa8.61□□□□□ -1.03
CD47-204ENST00000471694 TSC22D1Q15714 1073 aa8.61□□□□□ -1.03
CD47-204ENST00000471694 C15orf59Q2T9L4 293 aaPredicted RBP8.61□□□□□ -1.03
CD47-204ENST00000471694 ITPRIPL2Q3MIP1 535 aa8.61□□□□□ -1.03
CD47-204ENST00000471694 TSGA10IPQ3SY00 556 aa8.61□□□□□ -1.03
CD47-204ENST00000471694 C9orf64Q5T6V5 341 aa8.61□□□□□ -1.03
CD47-204ENST00000471694 IZUMO1Q8IYV9 350 aa8.61□□□□□ -1.03
CD47-204ENST00000471694 MPP5Q8N3R9 675 aa8.61□□□□□ -1.03
CD47-204ENST00000471694 ZBTB10Q96DT7 871 aa8.61□□□□□ -1.03
CD47-204ENST00000471694 FBXL18Q96ME1 805 aa8.61□□□□□ -1.03
CD47-204ENST00000471694 CPNE1Q99829 537 aa8.61□□□□□ -1.03
CD47-204ENST00000471694 GTF2IRD1Q9UHL9 959 aa8.61□□□□□ -1.03
CD47-204ENST00000471694 GABRQQ9UN88 632 aa8.61□□□□□ -1.03
CD47-204ENST00000471694 TBC1D30Q9Y2I9 924 aa8.61□□□□□ -1.03
CD47-204ENST00000471694 KCNE2Q9Y6J6 123 aa8.61□□□□□ -1.03
CD47-204ENST00000471694 XKRYO14609 159 aa8.61□□□□□ -1.03
CD47-204ENST00000471694 ZNF8P17098 575 aaPredicted RBP8.61□□□□□ -1.03
CD47-204ENST00000471694 RPL3P39023 403 aaKnown RBP8.61□□□□□ -1.03
CD47-204ENST00000471694 RANBP1P43487 201 aa8.61□□□□□ -1.03
CD47-204ENST00000471694 METTL21CQ5VZV1 264 aa8.61□□□□□ -1.03
CD47-204ENST00000471694 RHBDD1Q8TEB9 315 aa8.61□□□□□ -1.03
CD47-204ENST00000471694 DENND1AQ8TEH3 1009 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms