RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 CDH17Q12864 832 aa19.32■□□□□ 0.68
PSPC1-203ENST00000471658 MSLNQ13421 630 aaPredicted RBP19.32■□□□□ 0.68
PSPC1-203ENST00000471658 CRY1Q16526 586 aa19.32■□□□□ 0.68
PSPC1-203ENST00000471658 BBS9Q3SYG4 887 aa19.32■□□□□ 0.68
PSPC1-203ENST00000471658 PARS2Q7L3T8 475 aaKnown RBP19.32■□□□□ 0.68
PSPC1-203ENST00000471658 CLDN23Q96B33 292 aa19.32■□□□□ 0.68
PSPC1-203ENST00000471658 FMO2Q99518 471 aa19.32■□□□□ 0.68
PSPC1-203ENST00000471658 OSBPL1AQ9BXW6 950 aa19.32■□□□□ 0.68
PSPC1-203ENST00000471658 XAB2Q9HCS7 855 aaKnown RBP19.32■□□□□ 0.68
PSPC1-203ENST00000471658 SIT1Q9Y3P8 196 aa19.32■□□□□ 0.68
PSPC1-203ENST00000471658 SPO11Q9Y5K1 396 aa19.32■□□□□ 0.68
PSPC1-203ENST00000471658 A8MX80 341 aa19.31■□□□□ 0.68
PSPC1-203ENST00000471658 MID1O15344 667 aa19.31■□□□□ 0.68
PSPC1-203ENST00000471658 FASTKD3Q14CZ7 662 aaKnown RBP19.31■□□□□ 0.68
PSPC1-203ENST00000471658 CST6Q15828 149 aa19.31■□□□□ 0.68
PSPC1-203ENST00000471658 HIF1AQ16665 826 aa19.31■□□□□ 0.68
PSPC1-203ENST00000471658 CFAP58Q5T655 872 aa19.31■□□□□ 0.68
PSPC1-203ENST00000471658 DSG4Q86SJ6 1040 aa19.31■□□□□ 0.68
PSPC1-203ENST00000471658 TMPRSS6Q8IU80 811 aa19.31■□□□□ 0.68
PSPC1-203ENST00000471658 IGDCC3Q8IVU1 814 aa19.31■□□□□ 0.68
PSPC1-203ENST00000471658 SIGLEC10Q96LC7 697 aa19.31■□□□□ 0.68
PSPC1-203ENST00000471658 WDR83Q9BRX9 315 aaKnown RBP19.31■□□□□ 0.68
PSPC1-203ENST00000471658 ADGRE3Q9BY15 652 aa19.31■□□□□ 0.68
PSPC1-203ENST00000471658 OSBPL6Q9BZF3 934 aa19.31■□□□□ 0.68
PSPC1-203ENST00000471658 MFSD1Q9H3U5 465 aa19.31■□□□□ 0.68
PSPC1-203ENST00000471658 UQCRHLA0A096LP55 91 aa19.3■□□□□ 0.68
PSPC1-203ENST00000471658 TCRBV21S2A2A0A5A6 115 aa19.3■□□□□ 0.68
PSPC1-203ENST00000471658 RNASEH1O60930 286 aaKnown RBP19.3■□□□□ 0.68
PSPC1-203ENST00000471658 FGF1P05230 155 aa19.3■□□□□ 0.68
PSPC1-203ENST00000471658 UQCRHP07919 91 aa19.3■□□□□ 0.68
PSPC1-203ENST00000471658 MLNP12872 115 aa19.3■□□□□ 0.68
PSPC1-203ENST00000471658 ABL2P42684 1182 aa19.3■□□□□ 0.68
PSPC1-203ENST00000471658 TNNT3P45378 269 aaPredicted RBP19.3■□□□□ 0.68
PSPC1-203ENST00000471658 PDIA2Q13087 525 aaKnown RBP19.3■□□□□ 0.68
PSPC1-203ENST00000471658 POU6F1Q14863 301 aa19.3■□□□□ 0.68
PSPC1-203ENST00000471658 CCDC38Q502W7 563 aa19.3■□□□□ 0.68
PSPC1-203ENST00000471658 ZNF776Q68DI1 518 aaPredicted RBP19.3■□□□□ 0.68
PSPC1-203ENST00000471658 CWF19L1Q69YN2 538 aaKnown RBP19.3■□□□□ 0.68
PSPC1-203ENST00000471658 ANKMY2Q8IV38 441 aa19.3■□□□□ 0.68
PSPC1-203ENST00000471658 PDIK1LQ8N165 341 aa19.3■□□□□ 0.68
PSPC1-203ENST00000471658 TRIM56Q9BRZ2 755 aaKnown RBP19.3■□□□□ 0.68
PSPC1-203ENST00000471658 FAM129AQ9BZQ8 928 aa19.3■□□□□ 0.68
PSPC1-203ENST00000471658 SAYSD1Q9NPB0 183 aa19.3■□□□□ 0.68
PSPC1-203ENST00000471658 SYBUQ9NX95 663 aa19.3■□□□□ 0.68
PSPC1-203ENST00000471658 DKK3Q9UBP4 350 aa19.3■□□□□ 0.68
PSPC1-203ENST00000471658 MTRF1LQ9UGC7 380 aaKnown RBP19.3■□□□□ 0.68
PSPC1-203ENST00000471658 PHTF1Q9UMS5 762 aa19.3■□□□□ 0.68
PSPC1-203ENST00000471658 TSPAN11A1L157 253 aa19.29■□□□□ 0.68
PSPC1-203ENST00000471658 C1QTNF3-AMACRE9PGA6 284 aa19.29■□□□□ 0.68
PSPC1-203ENST00000471658 AURKAO14965 403 aa19.29■□□□□ 0.68
PSPC1-203ENST00000471658 PPFIA2O75334 1257 aa19.29■□□□□ 0.68
PSPC1-203ENST00000471658 HNF1BP35680 557 aa19.29■□□□□ 0.68
PSPC1-203ENST00000471658 UGP2Q16851 508 aa19.29■□□□□ 0.68
PSPC1-203ENST00000471658 SYT13Q7L8C5 426 aa19.29■□□□□ 0.68
PSPC1-203ENST00000471658 TTC7BQ86TV6 843 aa19.29■□□□□ 0.68
PSPC1-203ENST00000471658 AADATQ8N5Z0 425 aa19.29■□□□□ 0.68
PSPC1-203ENST00000471658 EIF1ADQ8N9N8 165 aaKnown RBP19.29■□□□□ 0.68
PSPC1-203ENST00000471658 BLOC1S5Q8TDH9 187 aa19.29■□□□□ 0.68
PSPC1-203ENST00000471658 CHRDQ9H2X0 955 aa19.29■□□□□ 0.68
PSPC1-203ENST00000471658 A0A0C4DFX4 3053 aa19.29■□□□□ 0.68
PSPC1-203ENST00000471658 A0A0J9YYE9 177 aa19.29■□□□□ 0.68
PSPC1-203ENST00000471658 CCDC78A2IDD5 438 aa19.29■□□□□ 0.68
PSPC1-203ENST00000471658 E7ESA3 106 aa19.29■□□□□ 0.68
PSPC1-203ENST00000471658 TRBC1P01850 177 aa19.29■□□□□ 0.68
PSPC1-203ENST00000471658 ALADP13716 330 aa19.29■□□□□ 0.68
PSPC1-203ENST00000471658 NDUFV2P19404 249 aa19.29■□□□□ 0.68
PSPC1-203ENST00000471658 ITGB7P26010 798 aa19.29■□□□□ 0.68
PSPC1-203ENST00000471658 DRD3P35462 400 aa19.29■□□□□ 0.68
PSPC1-203ENST00000471658 NPY2RP49146 381 aa19.29■□□□□ 0.68
PSPC1-203ENST00000471658 RPL26P61254 145 aaKnown RBP19.29■□□□□ 0.68
PSPC1-203ENST00000471658 CNTN1Q12860 1018 aa19.29■□□□□ 0.68
PSPC1-203ENST00000471658 UBAP2Q5T6F2 1119 aaKnown RBP19.29■□□□□ 0.68
PSPC1-203ENST00000471658 FAM46CQ5VWP2 391 aa19.29■□□□□ 0.68
PSPC1-203ENST00000471658 BRAT1Q6PJG6 821 aa19.29■□□□□ 0.68
PSPC1-203ENST00000471658 CENPUQ71F23 418 aa19.29■□□□□ 0.68
PSPC1-203ENST00000471658 MDGA1Q8NFP4 955 aa19.29■□□□□ 0.68
PSPC1-203ENST00000471658 MRGPRX1Q96LB2 322 aa19.29■□□□□ 0.68
PSPC1-203ENST00000471658 FRMD8Q9BZ67 464 aaPredicted RBP19.29■□□□□ 0.68
PSPC1-203ENST00000471658 BFARQ9NZS9 450 aa19.29■□□□□ 0.68
PSPC1-203ENST00000471658 SERGEFQ9UGK8 458 aa19.29■□□□□ 0.68
PSPC1-203ENST00000471658 RPL26L1Q9UNX3 145 aaKnown RBP19.29■□□□□ 0.68
PSPC1-203ENST00000471658 SDR42E2A6NKP2 422 aa19.28■□□□□ 0.68
PSPC1-203ENST00000471658 BUD23O43709 281 aaKnown RBP19.28■□□□□ 0.68
PSPC1-203ENST00000471658 ATG13O75143 517 aa19.28■□□□□ 0.68
PSPC1-203ENST00000471658 GABRG2P18507 467 aa19.28■□□□□ 0.68
PSPC1-203ENST00000471658 MCM3P25205 808 aa19.28■□□□□ 0.68
PSPC1-203ENST00000471658 P2RY2P41231 377 aa19.28■□□□□ 0.68
PSPC1-203ENST00000471658 ELK3P41970 407 aa19.28■□□□□ 0.68
PSPC1-203ENST00000471658 GRIA4P48058 902 aa19.28■□□□□ 0.68
PSPC1-203ENST00000471658 MTAPQ13126 283 aa19.28■□□□□ 0.68
PSPC1-203ENST00000471658 TSPAN33Q86UF1 283 aa19.28■□□□□ 0.68
PSPC1-203ENST00000471658 ZBED8Q8IZ13 594 aa19.28■□□□□ 0.68
PSPC1-203ENST00000471658 HCAR2Q8TDS4 363 aa19.28■□□□□ 0.68
PSPC1-203ENST00000471658 AENQ8WTP8 325 aaKnown RBP19.28■□□□□ 0.68
PSPC1-203ENST00000471658 SIPA1Q96FS4 1042 aa19.28■□□□□ 0.68
PSPC1-203ENST00000471658 C9orf72Q96LT7 481 aa19.28■□□□□ 0.68
PSPC1-203ENST00000471658 HHIPQ96QV1 700 aa19.28■□□□□ 0.68
PSPC1-203ENST00000471658 PCDH12Q9NPG4 1184 aa19.28■□□□□ 0.68
PSPC1-203ENST00000471658 CD93Q9NPY3 652 aa19.28■□□□□ 0.68
PSPC1-203ENST00000471658 CHMP2BQ9UQN3 213 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms