RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 TAF1BQ53T94 588 aaPredicted RBP9.2□□□□□ -0.94
SF3A1-206ENST00000471037 ARSIQ5FYB1 569 aa9.2□□□□□ -0.94
SF3A1-206ENST00000471037 ARTNQ5T4W7 220 aa9.2□□□□□ -0.94
SF3A1-206ENST00000471037 MEI1Q5TIA1 1274 aa9.2□□□□□ -0.94
SF3A1-206ENST00000471037 LRRC38Q5VT99 294 aa9.2□□□□□ -0.94
SF3A1-206ENST00000471037 LRRC31Q6UY01 552 aa9.2□□□□□ -0.94
SF3A1-206ENST00000471037 LINGO4Q6UY18 593 aa9.2□□□□□ -0.94
SF3A1-206ENST00000471037 SYT10Q6XYQ8 523 aa9.2□□□□□ -0.94
SF3A1-206ENST00000471037 ZNF783Q6ZMS7 281 aa9.2□□□□□ -0.94
SF3A1-206ENST00000471037 DPY19L3Q6ZPD9 716 aa9.2□□□□□ -0.94
SF3A1-206ENST00000471037 BNIPLQ7Z465 357 aa9.2□□□□□ -0.94
SF3A1-206ENST00000471037 PTAR1Q7Z6K3 402 aaPredicted RBP9.2□□□□□ -0.94
SF3A1-206ENST00000471037 RHOT1Q8IXI2 618 aa9.2□□□□□ -0.94
SF3A1-206ENST00000471037 KIF18AQ8NI77 898 aa9.2□□□□□ -0.94
SF3A1-206ENST00000471037 IFI44Q8TCB0 444 aa9.2□□□□□ -0.94
SF3A1-206ENST00000471037 MAPK15Q8TD08 544 aa9.2□□□□□ -0.94
SF3A1-206ENST00000471037 FAM172AQ8WUF8 416 aa9.2□□□□□ -0.94
SF3A1-206ENST00000471037 NAF1Q96HR8 494 aaKnown RBP9.2□□□□□ -0.94
SF3A1-206ENST00000471037 CFAP57Q96MR6 1250 aa9.2□□□□□ -0.94
SF3A1-206ENST00000471037 LENG8Q96PV6 779 aaPredicted RBP9.2□□□□□ -0.94
SF3A1-206ENST00000471037 SLC17A9Q9BYT1 436 aa9.2□□□□□ -0.94
SF3A1-206ENST00000471037 TKTL2Q9H0I9 626 aa9.2□□□□□ -0.94
SF3A1-206ENST00000471037 ABCG4Q9H172 646 aa9.2□□□□□ -0.94
SF3A1-206ENST00000471037 GOLPH3Q9H4A6 298 aa9.2□□□□□ -0.94
SF3A1-206ENST00000471037 WDCPQ9H6R7 721 aa9.2□□□□□ -0.94
SF3A1-206ENST00000471037 CAAP1Q9H8G2 361 aa9.2□□□□□ -0.94
SF3A1-206ENST00000471037 CPNE5Q9HCH3 593 aa9.2□□□□□ -0.94
SF3A1-206ENST00000471037 ZNF212Q9UDV6 495 aa9.2□□□□□ -0.94
SF3A1-206ENST00000471037 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.2□□□□□ -0.94
SF3A1-206ENST00000471037 FADS3Q9Y5Q0 445 aa9.2□□□□□ -0.94
SF3A1-206ENST00000471037 MGAQ8IWI9 3026 aa9.19□□□□□ -0.94
SF3A1-206ENST00000471037 A0A1W2PNU3 283 aaPredicted RBP9.19□□□□□ -0.94
SF3A1-206ENST00000471037 ILVBLA1L0T0 632 aa9.19□□□□□ -0.94
SF3A1-206ENST00000471037 CCDC66A2RUB6 948 aa9.19□□□□□ -0.94
SF3A1-206ENST00000471037 EME2A4GXA9 379 aaPredicted RBP9.19□□□□□ -0.94
SF3A1-206ENST00000471037 POM121BA6NF01 834 aa9.19□□□□□ -0.94
SF3A1-206ENST00000471037 J3QKU1 62 aa9.19□□□□□ -0.94
SF3A1-206ENST00000471037 TPP1O14773 563 aa9.19□□□□□ -0.94
SF3A1-206ENST00000471037 AQP9O43315 295 aa9.19□□□□□ -0.94
SF3A1-206ENST00000471037 LRCH4O75427 683 aa9.19□□□□□ -0.94
SF3A1-206ENST00000471037 TCEA3O75764 348 aa9.19□□□□□ -0.94
SF3A1-206ENST00000471037 ZMPSTE24O75844 475 aa9.19□□□□□ -0.94
SF3A1-206ENST00000471037 KRT7P08729 469 aa9.19□□□□□ -0.94
SF3A1-206ENST00000471037 MYF5P13349 255 aa9.19□□□□□ -0.94
SF3A1-206ENST00000471037 TFE3P19532 575 aaPredicted RBP9.19□□□□□ -0.94
SF3A1-206ENST00000471037 TGM2P21980 687 aa9.19□□□□□ -0.94
SF3A1-206ENST00000471037 L1CAMP32004 1257 aa9.19□□□□□ -0.94
SF3A1-206ENST00000471037 CTNNA1P35221 906 aaKnown RBP9.19□□□□□ -0.94
SF3A1-206ENST00000471037 MLLT3P42568 568 aaPredicted RBP9.19□□□□□ -0.94
SF3A1-206ENST00000471037 SERPINH1P50454 418 aaKnown RBP9.19□□□□□ -0.94
SF3A1-206ENST00000471037 HDAC4P56524 1084 aa9.19□□□□□ -0.94
SF3A1-206ENST00000471037 ATP11AP98196 1134 aa9.19□□□□□ -0.94
SF3A1-206ENST00000471037 SLC20A2Q08357 652 aa9.19□□□□□ -0.94
SF3A1-206ENST00000471037 FGL2Q14314 439 aa9.19□□□□□ -0.94
SF3A1-206ENST00000471037 CDO1Q16878 200 aa9.19□□□□□ -0.94
SF3A1-206ENST00000471037 C15orf59Q2T9L4 293 aaPredicted RBP9.19□□□□□ -0.94
SF3A1-206ENST00000471037 ZNF542PQ5EBM4 170 aa9.19□□□□□ -0.94
SF3A1-206ENST00000471037 ARHGAP40Q5TG30 622 aa9.19□□□□□ -0.94
SF3A1-206ENST00000471037 PAPD7Q5XG87 772 aaKnown RBP9.19□□□□□ -0.94
SF3A1-206ENST00000471037 RETSATQ6NUM9 610 aa9.19□□□□□ -0.94
SF3A1-206ENST00000471037 POLNQ7Z5Q5 900 aa9.19□□□□□ -0.94
SF3A1-206ENST00000471037 TFAP2DQ7Z6R9 452 aa9.19□□□□□ -0.94
SF3A1-206ENST00000471037 PCDH20Q8N6Y1 951 aaKnown RBP9.19□□□□□ -0.94
SF3A1-206ENST00000471037 UBL4BQ8N7F7 174 aa9.19□□□□□ -0.94
SF3A1-206ENST00000471037 DENND6BQ8NEG7 585 aa9.19□□□□□ -0.94
SF3A1-206ENST00000471037 OR7D4Q8NG98 312 aa9.19□□□□□ -0.94
SF3A1-206ENST00000471037 ASB12Q8WXK4 309 aa9.19□□□□□ -0.94
SF3A1-206ENST00000471037 TTC9Q92623 222 aa9.19□□□□□ -0.94
SF3A1-206ENST00000471037 HES6Q96HZ4 224 aa9.19□□□□□ -0.94
SF3A1-206ENST00000471037 FEM1CQ96JP0 617 aa9.19□□□□□ -0.94
SF3A1-206ENST00000471037 SLC46A1Q96NT5 459 aa9.19□□□□□ -0.94
SF3A1-206ENST00000471037 TBCBQ99426 244 aa9.19□□□□□ -0.94
SF3A1-206ENST00000471037 KLF6Q99612 283 aaPredicted RBP9.19□□□□□ -0.94
SF3A1-206ENST00000471037 HEPHQ9BQS7 1158 aa9.19□□□□□ -0.94
SF3A1-206ENST00000471037 C1QTNF2Q9BXJ5 285 aa9.19□□□□□ -0.94
SF3A1-206ENST00000471037 TLR10Q9BXR5 811 aa9.19□□□□□ -0.94
SF3A1-206ENST00000471037 TNKS2Q9H2K2 1166 aa9.19□□□□□ -0.94
SF3A1-206ENST00000471037 MPP6Q9NZW5 540 aa9.19□□□□□ -0.94
SF3A1-206ENST00000471037 HYOU1Q9Y4L1 999 aa9.19□□□□□ -0.94
SF3A1-206ENST00000471037 PCDHGA8Q9Y5G5 932 aa9.19□□□□□ -0.94
SF3A1-206ENST00000471037 PCDHA3Q9Y5H8 950 aa9.19□□□□□ -0.94
SF3A1-206ENST00000471037 CDRT15L2A8MXV6 281 aa9.18□□□□□ -0.94
SF3A1-206ENST00000471037 FPGTO14772 594 aa9.18□□□□□ -0.94
SF3A1-206ENST00000471037 RAD51BO15315 384 aa9.18□□□□□ -0.94
SF3A1-206ENST00000471037 KLK10O43240 276 aa9.18□□□□□ -0.94
SF3A1-206ENST00000471037 TSPAN6O43657 245 aa9.18□□□□□ -0.94
SF3A1-206ENST00000471037 PRPSAP2O60256 369 aa9.18□□□□□ -0.94
SF3A1-206ENST00000471037 PAK4O96013 591 aaPredicted RBP9.18□□□□□ -0.94
SF3A1-206ENST00000471037 ATP1A1P05023 1023 aaKnown RBP9.18□□□□□ -0.94
SF3A1-206ENST00000471037 TCP1P17987 556 aaKnown RBP9.18□□□□□ -0.94
SF3A1-206ENST00000471037 MIPP30301 263 aa9.18□□□□□ -0.94
SF3A1-206ENST00000471037 OR1E1P30953 314 aa9.18□□□□□ -0.94
SF3A1-206ENST00000471037 SSR1P43307 286 aaKnown RBP9.18□□□□□ -0.94
SF3A1-206ENST00000471037 CCNHP51946 323 aaPredicted RBP9.18□□□□□ -0.94
SF3A1-206ENST00000471037 AIF1P55008 147 aa9.18□□□□□ -0.94
SF3A1-206ENST00000471037 TAS2R40P59535 323 aa9.18□□□□□ -0.94
SF3A1-206ENST00000471037 PFN3P60673 137 aa9.18□□□□□ -0.94
SF3A1-206ENST00000471037 ARF5P84085 180 aa9.18□□□□□ -0.94
SF3A1-206ENST00000471037 SLC25A11Q02978 314 aaKnown RBP9.18□□□□□ -0.94
SF3A1-206ENST00000471037 DEUP1Q05D60 604 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms