RNA–Protein interactions for RNA: ENST00000469528.5

GAPVD1-214, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 4

Gene GAPVD1, Length 466 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-214ENST00000469528 RASA4O43374 803 aa12.78□□□□□ -0.36
GAPVD1-214ENST00000469528 ITGB2P05107 769 aa12.78□□□□□ -0.36
GAPVD1-214ENST00000469528 CCDC172P0C7W6 258 aa12.78□□□□□ -0.36
GAPVD1-214ENST00000469528 CCKBRP32239 447 aa12.78□□□□□ -0.36
GAPVD1-214ENST00000469528 RFC1P35251 1148 aaPredicted RBP12.78□□□□□ -0.36
GAPVD1-214ENST00000469528 UGT1A5P35504 534 aa12.78□□□□□ -0.36
GAPVD1-214ENST00000469528 HDAC4P56524 1084 aa12.78□□□□□ -0.36
GAPVD1-214ENST00000469528 GSCP56915 257 aaPredicted RBP12.78□□□□□ -0.36
GAPVD1-214ENST00000469528 POLR2FP61218 127 aaKnown RBP12.78□□□□□ -0.36
GAPVD1-214ENST00000469528 CCL7P80098 99 aa12.78□□□□□ -0.36
GAPVD1-214ENST00000469528 C1QBPQ07021 282 aaKnown RBP12.78□□□□□ -0.36
GAPVD1-214ENST00000469528 MTM1Q13496 603 aa12.78□□□□□ -0.36
GAPVD1-214ENST00000469528 PEX6Q13608 980 aa12.78□□□□□ -0.36
GAPVD1-214ENST00000469528 ARHGEF7Q14155 803 aa12.78□□□□□ -0.36
GAPVD1-214ENST00000469528 IRF4Q15306 451 aa12.78□□□□□ -0.36
GAPVD1-214ENST00000469528 TSR1Q2NL82 804 aaKnown RBP12.78□□□□□ -0.36
GAPVD1-214ENST00000469528 WSCD2Q2TBF2 565 aa12.78□□□□□ -0.36
GAPVD1-214ENST00000469528 HSP90AA4PQ58FG1 418 aa12.78□□□□□ -0.36
GAPVD1-214ENST00000469528 UMODL1-AS1Q8N2C9 162 aa12.78□□□□□ -0.36
GAPVD1-214ENST00000469528 CCDC185Q8N715 623 aa12.78□□□□□ -0.36
GAPVD1-214ENST00000469528 PAF1Q8N7H5 531 aa12.78□□□□□ -0.36
GAPVD1-214ENST00000469528 CCDC74AQ96AQ1 378 aa12.78□□□□□ -0.36
GAPVD1-214ENST00000469528 SGF29Q96ES7 293 aa12.78□□□□□ -0.36
GAPVD1-214ENST00000469528 WDR92Q96MX6 357 aa12.78□□□□□ -0.36
GAPVD1-214ENST00000469528 CMKLR1Q99788 373 aa12.78□□□□□ -0.36
GAPVD1-214ENST00000469528 C11orf70Q9BRQ4 267 aa12.78□□□□□ -0.36
GAPVD1-214ENST00000469528 KCTD5Q9NXV2 234 aa12.78□□□□□ -0.36
GAPVD1-214ENST00000469528 NOCTQ9UK39 431 aaKnown RBP12.78□□□□□ -0.36
GAPVD1-214ENST00000469528 APPL1Q9UKG1 709 aa12.78□□□□□ -0.36
GAPVD1-214ENST00000469528 DGKBQ9Y6T7 804 aa12.78□□□□□ -0.36
GAPVD1-214ENST00000469528 COL6A6A6NMZ7 2263 aa12.78□□□□□ -0.36
GAPVD1-214ENST00000469528 FAM170AA1A519 330 aa12.77□□□□□ -0.37
GAPVD1-214ENST00000469528 EIF3CLB5ME19 914 aaKnown RBP12.77□□□□□ -0.37
GAPVD1-214ENST00000469528 D6RAR5 112 aa12.77□□□□□ -0.37
GAPVD1-214ENST00000469528 SLC28A2O43868 658 aa12.77□□□□□ -0.37
GAPVD1-214ENST00000469528 CREB3O43889 395 aa12.77□□□□□ -0.37
GAPVD1-214ENST00000469528 RPLP0P05388 317 aaKnown RBP12.77□□□□□ -0.37
GAPVD1-214ENST00000469528 HOXC4P09017 264 aaPredicted RBP12.77□□□□□ -0.37
GAPVD1-214ENST00000469528 UNGP13051 313 aaPredicted RBP12.77□□□□□ -0.37
GAPVD1-214ENST00000469528 NFKBIAP25963 317 aa12.77□□□□□ -0.37
GAPVD1-214ENST00000469528 SERPINA4P29622 427 aa12.77□□□□□ -0.37
GAPVD1-214ENST00000469528 CSNK1DP48730 415 aa12.77□□□□□ -0.37
GAPVD1-214ENST00000469528 LIG3P49916 1009 aa12.77□□□□□ -0.37
GAPVD1-214ENST00000469528 ZNF143P52747 638 aaPredicted RBP12.77□□□□□ -0.37
GAPVD1-214ENST00000469528 NDST2P52849 883 aa12.77□□□□□ -0.37
GAPVD1-214ENST00000469528 FMO1Q01740 532 aa12.77□□□□□ -0.37
GAPVD1-214ENST00000469528 ALG11Q2TAA5 492 aa12.77□□□□□ -0.37
GAPVD1-214ENST00000469528 LRRC73Q5JTD7 316 aa12.77□□□□□ -0.37
GAPVD1-214ENST00000469528 KIAA1614Q5VZ46 1190 aa12.77□□□□□ -0.37
GAPVD1-214ENST00000469528 PPP1R2P3Q6NXS1 205 aa12.77□□□□□ -0.37
GAPVD1-214ENST00000469528 WDR59Q6PJI9 974 aa12.77□□□□□ -0.37
GAPVD1-214ENST00000469528 OGFOD3Q6PK18 319 aa12.77□□□□□ -0.37
GAPVD1-214ENST00000469528 TAF8Q7Z7C8 310 aa12.77□□□□□ -0.37
GAPVD1-214ENST00000469528 PHLDB2Q86SQ0 1253 aa12.77□□□□□ -0.37
GAPVD1-214ENST00000469528 PHF13Q86YI8 300 aaPredicted RBP12.77□□□□□ -0.37
GAPVD1-214ENST00000469528 C3orf20Q8ND61 904 aa12.77□□□□□ -0.37
GAPVD1-214ENST00000469528 FAM46DQ8NEK8 389 aa12.77□□□□□ -0.37
GAPVD1-214ENST00000469528 ANKRD20A12PQ8NF67 263 aa12.77□□□□□ -0.37
GAPVD1-214ENST00000469528 PCDH19Q8TAB3 1148 aa12.77□□□□□ -0.37
GAPVD1-214ENST00000469528 JOSD2Q8TAC2 188 aa12.77□□□□□ -0.37
GAPVD1-214ENST00000469528 RBM15Q96T37 977 aaKnown RBP eCLIP12.77□□□□□ -0.37
GAPVD1-214ENST00000469528 EIF3CQ99613 913 aaKnown RBP12.77□□□□□ -0.37
GAPVD1-214ENST00000469528 B3GNT4Q9C0J1 378 aa12.77□□□□□ -0.37
GAPVD1-214ENST00000469528 CLSTN2Q9H4D0 955 aa12.77□□□□□ -0.37
GAPVD1-214ENST00000469528 ATP13A3Q9H7F0 1226 aa12.77□□□□□ -0.37
GAPVD1-214ENST00000469528 PCDH12Q9NPG4 1184 aa12.77□□□□□ -0.37
GAPVD1-214ENST00000469528 SAMSN1Q9NSI8 373 aaKnown RBP12.77□□□□□ -0.37
GAPVD1-214ENST00000469528 RP1P56715 2156 aa12.77□□□□□ -0.37
GAPVD1-214ENST00000469528 TSPAN11A1L157 253 aa12.76□□□□□ -0.37
GAPVD1-214ENST00000469528 ARHGAP42A6NI28 874 aa12.76□□□□□ -0.37
GAPVD1-214ENST00000469528 NUDT21O43809 227 aaKnown RBP12.76□□□□□ -0.37
GAPVD1-214ENST00000469528 WISP1O95388 367 aa12.76□□□□□ -0.37
GAPVD1-214ENST00000469528 LIPCP11150 499 aa12.76□□□□□ -0.37
GAPVD1-214ENST00000469528 ITIH2P19823 946 aa12.76□□□□□ -0.37
GAPVD1-214ENST00000469528 CD82P27701 267 aa12.76□□□□□ -0.37
GAPVD1-214ENST00000469528 NSUN2Q08J23 767 aaKnown RBP eCLIP12.76□□□□□ -0.37
GAPVD1-214ENST00000469528 CYTH1Q15438 398 aa12.76□□□□□ -0.37
GAPVD1-214ENST00000469528 DPCR1Q3MIW9 517 aa12.76□□□□□ -0.37
GAPVD1-214ENST00000469528 RAB6CQ53S08 254 aa12.76□□□□□ -0.37
GAPVD1-214ENST00000469528 MANEAQ5SRI9 462 aa12.76□□□□□ -0.37
GAPVD1-214ENST00000469528 DCUN1D2Q6PH85 259 aa12.76□□□□□ -0.37
GAPVD1-214ENST00000469528 CCNJLQ8IV13 435 aa12.76□□□□□ -0.37
GAPVD1-214ENST00000469528 KYQ8NBH2 561 aa12.76□□□□□ -0.37
GAPVD1-214ENST00000469528 GPR156Q8NFN8 814 aa12.76□□□□□ -0.37
GAPVD1-214ENST00000469528 OR56A4Q8NGH8 313 aa12.76□□□□□ -0.37
GAPVD1-214ENST00000469528 ENOX1Q8TC92 643 aaKnown RBP12.76□□□□□ -0.37
GAPVD1-214ENST00000469528 KIAA1524Q8TCG1 905 aa12.76□□□□□ -0.37
GAPVD1-214ENST00000469528 SLC20A1Q8WUM9 679 aa12.76□□□□□ -0.37
GAPVD1-214ENST00000469528 PCMTD1Q96MG8 357 aaPredicted RBP12.76□□□□□ -0.37
GAPVD1-214ENST00000469528 CNPY3Q9BT09 278 aa12.76□□□□□ -0.37
GAPVD1-214ENST00000469528 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.76□□□□□ -0.37
GAPVD1-214ENST00000469528 SEMA4CQ9C0C4 833 aa12.76□□□□□ -0.37
GAPVD1-214ENST00000469528 RAB6CQ9H0N0 254 aa12.76□□□□□ -0.37
GAPVD1-214ENST00000469528 VPS16Q9H269 839 aa12.76□□□□□ -0.37
GAPVD1-214ENST00000469528 FAM207AQ9NSI2 230 aaPredicted RBP12.76□□□□□ -0.37
GAPVD1-214ENST00000469528 LRIT1Q9P2V4 623 aa12.76□□□□□ -0.37
GAPVD1-214ENST00000469528 PNMA8BQ9ULN7 279 aaPredicted RBP12.76□□□□□ -0.37
GAPVD1-214ENST00000469528 FZD10Q9ULW2 581 aa12.76□□□□□ -0.37
GAPVD1-214ENST00000469528 ATP8A1Q9Y2Q0 1164 aa12.76□□□□□ -0.37
GAPVD1-214ENST00000469528 COQ6Q9Y2Z9 468 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms