RNA–Protein interactions for RNA: ENST00000469479.1

VPS8-219, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-219ENST00000469479 NFATC1O95644 943 aa5.03□□□□□ -1.6
VPS8-219ENST00000469479 GJA1P17302 382 aa5.03□□□□□ -1.6
VPS8-219ENST00000469479 CYP3A7P24462 503 aa5.03□□□□□ -1.6
VPS8-219ENST00000469479 GABRR2P28476 465 aa5.03□□□□□ -1.6
VPS8-219ENST00000469479 EPHB2P29323 1055 aa5.03□□□□□ -1.6
VPS8-219ENST00000469479 MARCKSP29966 332 aaPredicted RBP5.03□□□□□ -1.6
VPS8-219ENST00000469479 EIF2S3P41091 472 aaKnown RBP5.03□□□□□ -1.6
VPS8-219ENST00000469479 PTGER3P43115 390 aa5.03□□□□□ -1.6
VPS8-219ENST00000469479 TUFMP49411 452 aaKnown RBP5.03□□□□□ -1.6
VPS8-219ENST00000469479 PDE6CP51160 858 aa5.03□□□□□ -1.6
VPS8-219ENST00000469479 CLCNKBP51801 687 aa5.03□□□□□ -1.6
VPS8-219ENST00000469479 EFNA5P52803 228 aa5.03□□□□□ -1.6
VPS8-219ENST00000469479 CDK17Q00537 523 aa5.03□□□□□ -1.6
VPS8-219ENST00000469479 SMARCB1Q12824 385 aa5.03□□□□□ -1.6
VPS8-219ENST00000469479 PPP2R5CQ13362 524 aa5.03□□□□□ -1.6
VPS8-219ENST00000469479 PRPF4BQ13523 1007 aaKnown RBP5.03□□□□□ -1.6
VPS8-219ENST00000469479 HDAC1Q13547 482 aaPredicted RBP5.03□□□□□ -1.6
VPS8-219ENST00000469479 LAMB3Q13751 1172 aa5.03□□□□□ -1.6
VPS8-219ENST00000469479 CAPSQ13938 189 aa5.03□□□□□ -1.6
VPS8-219ENST00000469479 MYBPC2Q14324 1141 aa5.03□□□□□ -1.6
VPS8-219ENST00000469479 ZNF268Q14587 947 aaPredicted RBP5.03□□□□□ -1.6
VPS8-219ENST00000469479 SMAD1Q15797 465 aaKnown RBP5.03□□□□□ -1.6
VPS8-219ENST00000469479 TAF12Q16514 161 aa5.03□□□□□ -1.6
VPS8-219ENST00000469479 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.03□□□□□ -1.6
VPS8-219ENST00000469479 XKR9Q5GH70 373 aa5.03□□□□□ -1.6
VPS8-219ENST00000469479 WDR45BQ5MNZ6 344 aa5.03□□□□□ -1.6
VPS8-219ENST00000469479 EOGTQ5NDL2 527 aa5.03□□□□□ -1.6
VPS8-219ENST00000469479 CNNM4Q6P4Q7 775 aa5.03□□□□□ -1.6
VPS8-219ENST00000469479 APOA5Q6Q788 366 aa5.03□□□□□ -1.6
VPS8-219ENST00000469479 TMPRSS12Q86WS5 348 aa5.03□□□□□ -1.6
VPS8-219ENST00000469479 CMTM8Q8IZV2 173 aa5.03□□□□□ -1.6
VPS8-219ENST00000469479 TMEM125Q96AQ2 219 aa5.03□□□□□ -1.6
VPS8-219ENST00000469479 CYFIP2Q96F07 1278 aa5.03□□□□□ -1.6
VPS8-219ENST00000469479 LRRC3BQ96PB8 259 aa5.03□□□□□ -1.6
VPS8-219ENST00000469479 PPP1R10Q96QC0 940 aaKnown RBP5.03□□□□□ -1.6
VPS8-219ENST00000469479 FNBP1Q96RU3 617 aa5.03□□□□□ -1.6
VPS8-219ENST00000469479 NAP1L4Q99733 375 aaKnown RBP5.03□□□□□ -1.6
VPS8-219ENST00000469479 MYOCQ99972 504 aa5.03□□□□□ -1.6
VPS8-219ENST00000469479 SH2D3AQ9BRG2 576 aa5.03□□□□□ -1.6
VPS8-219ENST00000469479 EBF3Q9H4W6 596 aa5.03□□□□□ -1.6
VPS8-219ENST00000469479 EMC7Q9NPA0 242 aa5.03□□□□□ -1.6
VPS8-219ENST00000469479 HPS4Q9NQG7 708 aa5.03□□□□□ -1.6
VPS8-219ENST00000469479 TDP1Q9NUW8 608 aa5.03□□□□□ -1.6
VPS8-219ENST00000469479 CACNG4Q9UBN1 327 aa5.03□□□□□ -1.6
VPS8-219ENST00000469479 AJAP1Q9UKB5 411 aaPredicted RBP5.03□□□□□ -1.6
VPS8-219ENST00000469479 DOCK6Q96HP0 2047 aa5.02□□□□□ -1.61
VPS8-219ENST00000469479 VWA8A3KMH1 1905 aa5.02□□□□□ -1.61
VPS8-219ENST00000469479 PODXLO00592 558 aa5.02□□□□□ -1.61
VPS8-219ENST00000469479 B4GALT5O43286 388 aa5.02□□□□□ -1.61
VPS8-219ENST00000469479 TNFSF14O43557 240 aa5.02□□□□□ -1.61
VPS8-219ENST00000469479 ENDOD1O94919 500 aa5.02□□□□□ -1.61
VPS8-219ENST00000469479 OAZ2O95190 189 aa5.02□□□□□ -1.61
VPS8-219ENST00000469479 LYPLA2O95372 231 aa5.02□□□□□ -1.61
VPS8-219ENST00000469479 CHRM2P08172 466 aa5.02□□□□□ -1.61
VPS8-219ENST00000469479 GCFC2P16383 781 aaKnown RBP5.02□□□□□ -1.61
VPS8-219ENST00000469479 RXRAP19793 462 aa5.02□□□□□ -1.61
VPS8-219ENST00000469479 ENPP1P22413 925 aa5.02□□□□□ -1.61
VPS8-219ENST00000469479 HOXC13P31276 330 aa5.02□□□□□ -1.61
VPS8-219ENST00000469479 EIF2DP41214 584 aaKnown RBP5.02□□□□□ -1.61
VPS8-219ENST00000469479 IFNAR2P48551 515 aa5.02□□□□□ -1.61
VPS8-219ENST00000469479 NXPH1P58417 271 aa5.02□□□□□ -1.61
VPS8-219ENST00000469479 AKAP17AQ02040 695 aaKnown RBP5.02□□□□□ -1.61
VPS8-219ENST00000469479 YWHAHQ04917 246 aaPredicted RBP5.02□□□□□ -1.61
VPS8-219ENST00000469479 ZNF33AQ06730 810 aa5.02□□□□□ -1.61
VPS8-219ENST00000469479 GPR17Q13304 367 aa5.02□□□□□ -1.61
VPS8-219ENST00000469479 PDCD1Q15116 288 aa5.02□□□□□ -1.61
VPS8-219ENST00000469479 TCEA2Q15560 299 aa5.02□□□□□ -1.61
VPS8-219ENST00000469479 ADRM1Q16186 407 aa5.02□□□□□ -1.61
VPS8-219ENST00000469479 PLEKHG6Q3KR16 790 aa5.02□□□□□ -1.61
VPS8-219ENST00000469479 TMEM119Q4V9L6 283 aa5.02□□□□□ -1.61
VPS8-219ENST00000469479 DNAJB7Q7Z6W7 309 aaPredicted RBP5.02□□□□□ -1.61
VPS8-219ENST00000469479 YTHDF3Q7Z739 585 aaKnown RBP5.02□□□□□ -1.61
VPS8-219ENST00000469479 USP37Q86T82 979 aa5.02□□□□□ -1.61
VPS8-219ENST00000469479 PNPLA1Q8N8W4 532 aa5.02□□□□□ -1.61
VPS8-219ENST00000469479 MCPH1Q8NEM0 835 aa5.02□□□□□ -1.61
VPS8-219ENST00000469479 ETNPPLQ8TBG4 499 aa5.02□□□□□ -1.61
VPS8-219ENST00000469479 TBC1D15Q8TC07 691 aa5.02□□□□□ -1.61
VPS8-219ENST00000469479 SETD7Q8WTS6 366 aaKnown RBP5.02□□□□□ -1.61
VPS8-219ENST00000469479 C2orf15Q8WU43 125 aaKnown RBP5.02□□□□□ -1.61
VPS8-219ENST00000469479 OSCP1Q8WVF1 389 aa5.02□□□□□ -1.61
VPS8-219ENST00000469479 HOXB13Q92826 284 aaPredicted RBP5.02□□□□□ -1.61
VPS8-219ENST00000469479 HMCESQ96FZ2 354 aa5.02□□□□□ -1.61
VPS8-219ENST00000469479 LXNQ9BS40 222 aa5.02□□□□□ -1.61
VPS8-219ENST00000469479 CCDC94Q9BW85 323 aaPredicted RBP5.02□□□□□ -1.61
VPS8-219ENST00000469479 SLKQ9H2G2 1235 aaPredicted RBP5.02□□□□□ -1.61
VPS8-219ENST00000469479 FZD8Q9H461 694 aa5.02□□□□□ -1.61
VPS8-219ENST00000469479 PDZD7Q9H5P4 517 aa5.02□□□□□ -1.61
VPS8-219ENST00000469479 TMEM206Q9H813 350 aa5.02□□□□□ -1.61
VPS8-219ENST00000469479 TTC12Q9H892 705 aaPredicted RBP5.02□□□□□ -1.61
VPS8-219ENST00000469479 ECT2Q9H8V3 914 aa5.02□□□□□ -1.61
VPS8-219ENST00000469479 SH3GLB2Q9NR46 395 aa5.02□□□□□ -1.61
VPS8-219ENST00000469479 ANKEF1Q9NU02 776 aa5.02□□□□□ -1.61
VPS8-219ENST00000469479 SCOCQ9UIL1 159 aa5.02□□□□□ -1.61
VPS8-219ENST00000469479 HEMK1Q9Y5R4 338 aaPredicted RBP5.02□□□□□ -1.61
VPS8-219ENST00000469479 PDCD11Q14690 1871 aaKnown RBP5.02□□□□□ -1.61
VPS8-219ENST00000469479 NUP205Q92621 2012 aa5.02□□□□□ -1.61
VPS8-219ENST00000469479 PTPRQQ9UMZ3 2332 aa5.02□□□□□ -1.61
VPS8-219ENST00000469479 ATXN2Q99700 1313 aaKnown RBP5.01□□□□□ -1.61
VPS8-219ENST00000469479 SMIM28A0A1B0GU29 152 aa5.01□□□□□ -1.61
VPS8-219ENST00000469479 CDHR4A6H8M9 788 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms