RNA–Protein interactions for RNA: ENST00000469443.2

PHGDH-204, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-204ENST00000469443 HS1BP3Q53T59 392 aa18.41■□□□□ 0.54
PHGDH-204ENST00000469443 TPRG1LQ5T0D9 272 aa18.41■□□□□ 0.54
PHGDH-204ENST00000469443 KDM7AQ6ZMT4 941 aa18.41■□□□□ 0.54
PHGDH-204ENST00000469443 LRRC49Q8IUZ0 686 aa18.41■□□□□ 0.54
PHGDH-204ENST00000469443 PGBD5Q8N414 524 aa18.41■□□□□ 0.54
PHGDH-204ENST00000469443 PAF1Q8N7H5 531 aa18.41■□□□□ 0.54
PHGDH-204ENST00000469443 KCTD6Q8NC69 237 aa18.41■□□□□ 0.54
PHGDH-204ENST00000469443 NSMCE3Q96MG7 304 aa18.41■□□□□ 0.54
PHGDH-204ENST00000469443 MGME1Q9BQP7 344 aa18.41■□□□□ 0.54
PHGDH-204ENST00000469443 ZNF670Q9BS34 389 aa18.41■□□□□ 0.54
PHGDH-204ENST00000469443 CAAP1Q9H8G2 361 aa18.41■□□□□ 0.54
PHGDH-204ENST00000469443 MBNL1Q9NR56 388 aaKnown RBP18.41■□□□□ 0.54
PHGDH-204ENST00000469443 COQ6Q9Y2Z9 468 aa18.41■□□□□ 0.54
PHGDH-204ENST00000469443 CFAP69A5D8W1 941 aa18.4■□□□□ 0.54
PHGDH-204ENST00000469443 NEMP2A6NFY4 417 aa18.4■□□□□ 0.54
PHGDH-204ENST00000469443 TMEM110-MUSTN1A8MSY1 372 aa18.4■□□□□ 0.54
PHGDH-204ENST00000469443 H3BM21 787 aa18.4■□□□□ 0.54
PHGDH-204ENST00000469443 TRIM38O00635 465 aa18.4■□□□□ 0.54
PHGDH-204ENST00000469443 TRAFD1O14545 582 aaPredicted RBP18.4■□□□□ 0.54
PHGDH-204ENST00000469443 FFAR2O15552 330 aa18.4■□□□□ 0.54
PHGDH-204ENST00000469443 MFSD11O43934 449 aa18.4■□□□□ 0.54
PHGDH-204ENST00000469443 PRKCGP05129 697 aa18.4■□□□□ 0.54
PHGDH-204ENST00000469443 LIG3P49916 1009 aa18.4■□□□□ 0.54
PHGDH-204ENST00000469443 THOP1P52888 689 aa18.4■□□□□ 0.54
PHGDH-204ENST00000469443 PTK2BQ14289 1009 aa18.4■□□□□ 0.54
PHGDH-204ENST00000469443 MESDQ14696 234 aa18.4■□□□□ 0.54
PHGDH-204ENST00000469443 LRRC14Q15048 493 aa18.4■□□□□ 0.54
PHGDH-204ENST00000469443 PAFAH1B3Q15102 231 aaKnown RBP18.4■□□□□ 0.54
PHGDH-204ENST00000469443 AGERQ15109 404 aa18.4■□□□□ 0.54
PHGDH-204ENST00000469443 IRF4Q15306 451 aa18.4■□□□□ 0.54
PHGDH-204ENST00000469443 SMAD1Q15797 465 aaKnown RBP18.4■□□□□ 0.54
PHGDH-204ENST00000469443 ANKRD20A8PQ5CZ79 823 aa18.4■□□□□ 0.54
PHGDH-204ENST00000469443 MARC1Q5VT66 337 aa18.4■□□□□ 0.54
PHGDH-204ENST00000469443 NCBP2-AS2Q69YL0 99 aa18.4■□□□□ 0.54
PHGDH-204ENST00000469443 MAP7D3Q8IWC1 876 aa18.4■□□□□ 0.54
PHGDH-204ENST00000469443 RHOT2Q8IXI1 618 aa18.4■□□□□ 0.54
PHGDH-204ENST00000469443 PCDH19Q8TAB3 1148 aa18.4■□□□□ 0.54
PHGDH-204ENST00000469443 SLC35G2Q8TBE7 412 aa18.4■□□□□ 0.54
PHGDH-204ENST00000469443 NUDCD1Q96RS6 583 aa18.4■□□□□ 0.54
PHGDH-204ENST00000469443 TRIM5Q9C035 493 aa18.4■□□□□ 0.54
PHGDH-204ENST00000469443 A0A1W2PQ67 120 aa18.39■□□□□ 0.53
PHGDH-204ENST00000469443 TTC24A2A3L6 582 aaPredicted RBP18.39■□□□□ 0.53
PHGDH-204ENST00000469443 SCAMP1O15126 338 aa18.39■□□□□ 0.53
PHGDH-204ENST00000469443 HTRA2O43464 458 aaPredicted RBP18.39■□□□□ 0.53
PHGDH-204ENST00000469443 SOCS5O75159 536 aa18.39■□□□□ 0.53
PHGDH-204ENST00000469443 MTA2O94776 668 aa18.39■□□□□ 0.53
PHGDH-204ENST00000469443 GIMD1P0DJR0 217 aa18.39■□□□□ 0.53
PHGDH-204ENST00000469443 ALPPL2P10696 532 aa18.39■□□□□ 0.53
PHGDH-204ENST00000469443 MMP13P45452 471 aa18.39■□□□□ 0.53
PHGDH-204ENST00000469443 SEMG2Q02383 582 aa18.39■□□□□ 0.53
PHGDH-204ENST00000469443 GALNT2Q10471 571 aa18.39■□□□□ 0.53
PHGDH-204ENST00000469443 EIF2B5Q13144 721 aaKnown RBP18.39■□□□□ 0.53
PHGDH-204ENST00000469443 ILKQ13418 452 aa18.39■□□□□ 0.53
PHGDH-204ENST00000469443 WSCD2Q2TBF2 565 aa18.39■□□□□ 0.53
PHGDH-204ENST00000469443 RALGPS1Q5JS13 557 aa18.39■□□□□ 0.53
PHGDH-204ENST00000469443 ZCCHC14Q8WYQ9 949 aaKnown RBP18.39■□□□□ 0.53
PHGDH-204ENST00000469443 SPOCK2Q92563 424 aa18.39■□□□□ 0.53
PHGDH-204ENST00000469443 FAF2Q96CS3 445 aa18.39■□□□□ 0.53
PHGDH-204ENST00000469443 SCUBE2Q9NQ36 999 aa18.39■□□□□ 0.53
PHGDH-204ENST00000469443 NLGN3Q9NZ94 848 aa18.39■□□□□ 0.53
PHGDH-204ENST00000469443 KLF15Q9UIH9 416 aa18.39■□□□□ 0.53
PHGDH-204ENST00000469443 ZMIZ1Q9ULJ6 1067 aa18.39■□□□□ 0.53
PHGDH-204ENST00000469443 LZTS3O60299 673 aaPredicted RBP18.38■□□□□ 0.53
PHGDH-204ENST00000469443 JUNDP17535 347 aa18.38■□□□□ 0.53
PHGDH-204ENST00000469443 ACP1P24666 158 aa18.38■□□□□ 0.53
PHGDH-204ENST00000469443 GARSP41250 739 aaKnown RBP18.38■□□□□ 0.53
PHGDH-204ENST00000469443 ARHGAP25P42331 645 aa18.38■□□□□ 0.53
PHGDH-204ENST00000469443 RALGDSQ12967 914 aa18.38■□□□□ 0.53
PHGDH-204ENST00000469443 ZFYVE27Q5T4F4 411 aa18.38■□□□□ 0.53
PHGDH-204ENST00000469443 MACC1Q6ZN28 852 aa18.38■□□□□ 0.53
PHGDH-204ENST00000469443 DPPA4Q7L190 304 aa18.38■□□□□ 0.53
PHGDH-204ENST00000469443 TMPRSS12Q86WS5 348 aa18.38■□□□□ 0.53
PHGDH-204ENST00000469443 TEX26Q8N6G2 289 aa18.38■□□□□ 0.53
PHGDH-204ENST00000469443 ZNF548Q8NEK5 533 aaPredicted RBP18.38■□□□□ 0.53
PHGDH-204ENST00000469443 BTN2A2Q8WVV5 523 aa18.38■□□□□ 0.53
PHGDH-204ENST00000469443 RFFLQ8WZ73 363 aa18.38■□□□□ 0.53
PHGDH-204ENST00000469443 DUSP23Q9BVJ7 150 aa18.38■□□□□ 0.53
PHGDH-204ENST00000469443 NOD2Q9HC29 1040 aa18.38■□□□□ 0.53
PHGDH-204ENST00000469443 INTUQ9ULD6 942 aa18.38■□□□□ 0.53
PHGDH-204ENST00000469443 PCDHGC4Q9Y5F7 938 aa18.38■□□□□ 0.53
PHGDH-204ENST00000469443 CSNK1G3Q9Y6M4 447 aa18.38■□□□□ 0.53
PHGDH-204ENST00000469443 ASXL3Q9C0F0 2248 aa18.38■□□□□ 0.53
PHGDH-204ENST00000469443 AQP9O43315 295 aa18.37■□□□□ 0.53
PHGDH-204ENST00000469443 ELFN1P0C7U0 828 aa18.37■□□□□ 0.53
PHGDH-204ENST00000469443 KDELR1P24390 212 aa18.37■□□□□ 0.53
PHGDH-204ENST00000469443 PEX5P50542 639 aa18.37■□□□□ 0.53
PHGDH-204ENST00000469443 MAXP61244 160 aa18.37■□□□□ 0.53
PHGDH-204ENST00000469443 DAB2P98082 770 aa18.37■□□□□ 0.53
PHGDH-204ENST00000469443 IFI16Q16666 785 aaKnown RBP18.37■□□□□ 0.53
PHGDH-204ENST00000469443 TIGD7Q6NT04 549 aaPredicted RBP18.37■□□□□ 0.53
PHGDH-204ENST00000469443 LIPIQ6XZB0 460 aa18.37■□□□□ 0.53
PHGDH-204ENST00000469443 NT5MQ9NPB1 228 aa18.37■□□□□ 0.53
PHGDH-204ENST00000469443 ACACAQ13085 2346 aa18.37■□□□□ 0.53
PHGDH-204ENST00000469443 FAM149AA5PLN7 773 aa18.36■□□□□ 0.53
PHGDH-204ENST00000469443 K7ESM1 405 aa18.36■□□□□ 0.53
PHGDH-204ENST00000469443 NEBLO76041 1014 aa18.36■□□□□ 0.53
PHGDH-204ENST00000469443 CPP00450 1065 aa18.36■□□□□ 0.53
PHGDH-204ENST00000469443 RP1P56715 2156 aa18.36■□□□□ 0.53
PHGDH-204ENST00000469443 TRAF2Q12933 501 aa18.36■□□□□ 0.53
PHGDH-204ENST00000469443 MTM1Q13496 603 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms