RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 SIAEQ9HAT2 523 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 FANCEQ9HB96 536 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 RC3H2Q9HBD1 1191 aaKnown RBP4.9□□□□□ -1.63
SF3B1-207ENST00000468925 PCDH9Q9HC56 1237 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 AKIP1Q9NQ31 210 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 PRDM7Q9NQW5 492 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 GIMAP4Q9NUV9 329 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 PAK1IP1Q9NWT1 392 aaPredicted RBP4.9□□□□□ -1.63
SF3B1-207ENST00000468925 LUZP4Q9P127 313 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 HMGXB4Q9UGU5 601 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 EBF1Q9UH73 591 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 POU2F3Q9UKI9 436 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 DENND2AQ9ULE3 1009 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 PPT2Q9UMR5 302 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 PLLPQ9Y342 182 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 EMSYQ7Z589 1322 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 AFDNP55196 1824 aaKnown RBP4.9□□□□□ -1.63
SF3B1-207ENST00000468925 TOGARAM1Q9Y4F4 1720 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 ANKRD36CQ5JPF3 1778 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 A0A0G2JLW4 131 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 FAM237BA0A1B0GVD1 139 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 TCRBV5S4A2TA0A5A2 114 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 MYMKA6NI61 221 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 OR5K4A6NMS3 321 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 PDZK1P1A8MUH7 402 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 FOXO6A8MYZ6 492 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 H0Y626 953 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 TRIM38O00635 465 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 SLC9A3R1O14745 358 aaPredicted RBP4.89□□□□□ -1.63
SF3B1-207ENST00000468925 RAD51BO15315 384 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 EIF3DO15371 548 aaKnown RBP eCLIP4.89□□□□□ -1.63
SF3B1-207ENST00000468925 TLR3O15455 904 aaKnown RBP4.89□□□□□ -1.63
SF3B1-207ENST00000468925 HTRA2O43464 458 aaPredicted RBP4.89□□□□□ -1.63
SF3B1-207ENST00000468925 NDUFA2O43678 99 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 KPNA6O60684 536 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 GAS7O60861 476 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 KCNJ13O60928 360 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 NOS1APO75052 506 aaPredicted RBP4.89□□□□□ -1.63
SF3B1-207ENST00000468925 RNASEH2AO75792 299 aaKnown RBP4.89□□□□□ -1.63
SF3B1-207ENST00000468925 CCNKO75909 580 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 EPN2O95208 641 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 ATE1O95260 518 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 NDST3O95803 873 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 FTLP02792 175 aaPredicted RBP4.89□□□□□ -1.63
SF3B1-207ENST00000468925 SNRPA1P09661 255 aaKnown RBP4.89□□□□□ -1.63
SF3B1-207ENST00000468925 TFPTP0C1Z6 253 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 CETPP11597 493 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 COX4I1P13073 169 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 SLC5A1P13866 664 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 ITGB5P18084 799 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 GARTP22102 1010 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 NR2F2P24468 414 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 PTX3P26022 381 aaPredicted RBP4.89□□□□□ -1.63
SF3B1-207ENST00000468925 ERP29P30040 261 aaKnown RBP4.89□□□□□ -1.63
SF3B1-207ENST00000468925 L1CAMP32004 1257 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 CRHR1P34998 444 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 EIF2DP41214 584 aaKnown RBP4.89□□□□□ -1.63
SF3B1-207ENST00000468925 RPS5P46782 204 aaKnown RBP4.89□□□□□ -1.63
SF3B1-207ENST00000468925 HARS2P49590 506 aaKnown RBP4.89□□□□□ -1.63
SF3B1-207ENST00000468925 RAB25P57735 213 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 SSTP61278 116 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 COPZ1P61923 177 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 SNRPFP62306 86 aaKnown RBP4.89□□□□□ -1.63
SF3B1-207ENST00000468925 FOXO4P98177 505 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 RHDQ02161 417 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 GAD2Q05329 585 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 OVGP1Q12889 678 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 BFSP1Q12934 665 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 BNIP2Q12982 314 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 MTMR1Q13613 665 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 RAB39AQ14964 217 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 ZNF124Q15973 351 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 KNOP1Q1ED39 458 aaKnown RBP4.89□□□□□ -1.63
SF3B1-207ENST00000468925 GFOD2Q3B7J2 385 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 LRIT3Q3SXY7 679 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 MGAT5BQ3V5L5 792 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 ZFP69Q49AA0 526 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 FAM47AQ5JRC9 791 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 ZNF484Q5JVG2 852 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 C6orf52Q5T4I8 152 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 LRRC38Q5VT99 294 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 AGAP6Q5VW22 663 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 GPR107Q5VW38 600 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 SLFN13Q68D06 897 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 TIGD3Q6B0B8 471 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 CYP4F22Q6NT55 531 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 UNC5AQ6ZN44 842 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 TIFABQ6ZNK6 161 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 ZBTB49Q6ZSB9 765 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 CREB3L2Q70SY1 520 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 CYS1Q717R9 158 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 SLC26A11Q86WA9 606 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.89□□□□□ -1.63
SF3B1-207ENST00000468925 RHOT1Q8IXI2 618 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 PPIL6Q8IXY8 311 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 KATNAL2Q8IYT4 538 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 RCOR2Q8IZ40 523 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 LGI2Q8N0V4 545 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 KCT2Q8NC54 265 aa4.89□□□□□ -1.63
SF3B1-207ENST00000468925 ABHD11Q8NFV4 315 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms