RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 ZNF185O15231 689 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 MSI1O43347 362 aaKnown RBP4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 PRPSAP2O60256 369 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 MTA2O94776 668 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 PRKD3O94806 890 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 APOL3O95236 402 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 TRUB2O95900 331 aaKnown RBP4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 MOCS2O96007 188 aaPredicted RBP4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 TUBB4AP04350 444 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 FYNP06241 537 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 MBL2P11226 248 aaPredicted RBP4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 HMGA1P17096 107 aaKnown RBP4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 IL1R2P27930 398 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 GABRR2P28476 465 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 MIPP30301 263 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 RDXP35241 583 aaKnown RBP4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 SLC1A1P43005 524 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 MARCKSL1P49006 195 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 SLURP1P55000 103 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 GSCP56915 257 aaPredicted RBP4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 TBX4P57082 545 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 CD83Q01151 205 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 HYAL1Q12794 435 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 KRT81Q14533 505 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 CLUL1Q15846 466 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 DUSP6Q16828 381 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 SMTNL2Q2TAL5 461 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 KRTAP19-4Q3LI73 84 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 SLC25A52Q3SY17 297 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 HECTD3Q5T447 861 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 CCDC181Q5TID7 509 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 KAZNQ674X7 775 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 TMEM200BQ69YZ2 307 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 TXNDC8Q6A555 127 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 TXNRD3NBQ6F5E7 133 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 GRAMD4Q6IC98 578 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 C11orf63Q6NUN7 778 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 AADACL2Q6P093 401 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 BHLHA9Q7RTU4 235 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 KANSL1Q7Z3B3 1105 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 GRASPQ7Z6J2 395 aaPredicted RBP4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 SLFN11Q7Z7L1 901 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 TAC4Q86UU9 113 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 NT5DC3Q86UY8 548 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 CXorf67Q86X51 503 aaPredicted RBP4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 FAM131BQ86XD5 332 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 ZNF761Q86XN6 746 aaPredicted RBP4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 RHOT1Q8IXI2 618 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 GPR65Q8IYL9 337 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 ARFGAP1Q8N6T3 406 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 UBL4BQ8N7F7 174 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 ARL14EPQ8N8R7 260 aaPredicted RBP4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 MAB21L3Q8N8X9 362 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 LRRC57Q8N9N7 239 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 TXNDC5Q8NBS9 432 aaKnown RBP4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 KCTD6Q8NC69 237 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 NUDT10Q8NFP7 164 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 DQX1Q8TE96 717 aaKnown RBP4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 ING5Q8WYH8 240 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 SMG7Q92540 1137 aaKnown RBP4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 MRPS31Q92665 395 aaKnown RBP4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 KRT35Q92764 455 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 CASP10Q92851 521 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 PPP2R3CQ969Q6 453 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 PSMG2Q969U7 264 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 MRPL38Q96DV4 380 aaKnown RBP4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 TCEAL4Q96EI5 215 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 NUDT11Q96G61 164 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 AHCYL2Q96HN2 611 aaKnown RBP4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 MS4A14Q96JA4 679 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 SLC2A13Q96QE2 648 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 GCNAQ96QF7 691 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 CYP2S1Q96SQ9 504 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 OSBPL9Q96SU4 736 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 SPATA25Q9BR10 227 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 HEMGNQ9BXL5 484 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 TLR10Q9BXR5 811 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 MAK16Q9BXY0 300 aaKnown RBP4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 PITHD1Q9GZP4 211 aaPredicted RBP4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 SIK2Q9H0K1 926 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 TMEM168Q9H0V1 697 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 TTYH1Q9H313 450 aaPredicted RBP4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 SEMA4AQ9H3S1 761 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 PLEKHA4Q9H4M7 779 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 DHX35Q9H5Z1 703 aaKnown RBP4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 WDCPQ9H6R7 721 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 PNPLA8Q9NP80 782 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 ASAH2Q9NR71 780 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 GKN1Q9NS71 199 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 DDIT4Q9NX09 232 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 SMPD4Q9NXE4 827 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 SMARCAL1Q9NZC9 954 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 IL37Q9NZH6 218 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 EHD2Q9NZN4 543 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 KCMF1Q9P0J7 381 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 CALCOCO1Q9P1Z2 691 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 DNMT3BQ9UBC3 853 aaKnown RBP4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 MAFFQ9ULX9 164 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 USP18Q9UMW8 372 aa4.21□□□□□ -1.74
TMEM39A-204ENST00000468545 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms