RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 SERGEFQ9UGK8 458 aa15.29■□□□□ 0.04
NPHP4-205ENST00000466897 ASIC3Q9UHC3 531 aa15.29■□□□□ 0.04
NPHP4-205ENST00000466897 CHKBQ9Y259 395 aa15.29■□□□□ 0.04
NPHP4-205ENST00000466897 TNRC6BQ9UPQ9 1833 aaKnown RBP15.29■□□□□ 0.04
NPHP4-205ENST00000466897 A0A0J9YYE9 177 aa15.28■□□□□ 0.04
NPHP4-205ENST00000466897 ANKRD66B4E2M5 251 aa15.28■□□□□ 0.04
NPHP4-205ENST00000466897 C10orf142B7Z368 130 aa15.28■□□□□ 0.04
NPHP4-205ENST00000466897 E7EVH7 732 aa15.28■□□□□ 0.04
NPHP4-205ENST00000466897 SMAPO00193 183 aa15.28■□□□□ 0.04
NPHP4-205ENST00000466897 AP3B1O00203 1094 aa15.28■□□□□ 0.04
NPHP4-205ENST00000466897 PLRG1O43660 514 aaKnown RBP15.28■□□□□ 0.04
NPHP4-205ENST00000466897 RNASEH2AO75792 299 aaKnown RBP15.28■□□□□ 0.04
NPHP4-205ENST00000466897 TRBC1P01850 177 aa15.28■□□□□ 0.04
NPHP4-205ENST00000466897 FGF1P05230 155 aa15.28■□□□□ 0.04
NPHP4-205ENST00000466897 APRTP07741 180 aa15.28■□□□□ 0.04
NPHP4-205ENST00000466897 ATXN1LP0C7T5 689 aaKnown RBP15.28■□□□□ 0.04
NPHP4-205ENST00000466897 IVDP26440 423 aa15.28■□□□□ 0.04
NPHP4-205ENST00000466897 ADPRHP54922 357 aa15.28■□□□□ 0.04
NPHP4-205ENST00000466897 BASP1P80723 227 aaKnown RBP15.28■□□□□ 0.04
NPHP4-205ENST00000466897 CSTF1Q05048 431 aaKnown RBP15.28■□□□□ 0.04
NPHP4-205ENST00000466897 KCNJ11Q14654 390 aa15.28■□□□□ 0.04
NPHP4-205ENST00000466897 TRIP13Q15645 432 aaPredicted RBP15.28■□□□□ 0.04
NPHP4-205ENST00000466897 SLC1A5Q15758 541 aa15.28■□□□□ 0.04
NPHP4-205ENST00000466897 PCSK7Q16549 785 aa15.28■□□□□ 0.04
NPHP4-205ENST00000466897 MAP7D1Q3KQU3 841 aa15.28■□□□□ 0.04
NPHP4-205ENST00000466897 POM121L1PQ3SYA9 428 aa15.28■□□□□ 0.04
NPHP4-205ENST00000466897 FAXCQ5TGI0 409 aa15.28■□□□□ 0.04
NPHP4-205ENST00000466897 CCDC70Q6NSX1 233 aa15.28■□□□□ 0.04
NPHP4-205ENST00000466897 NEK5Q6P3R8 708 aa15.28■□□□□ 0.04
NPHP4-205ENST00000466897 USP45Q70EL2 814 aa15.28■□□□□ 0.04
NPHP4-205ENST00000466897 TTC7BQ86TV6 843 aa15.28■□□□□ 0.04
NPHP4-205ENST00000466897 CACUL1Q86Y37 369 aa15.28■□□□□ 0.04
NPHP4-205ENST00000466897 PDCD7Q8N8D1 485 aaKnown RBP15.28■□□□□ 0.04
NPHP4-205ENST00000466897 IPMKQ8NFU5 416 aa15.28■□□□□ 0.04
NPHP4-205ENST00000466897 PDCD6IPQ8WUM4 868 aaKnown RBP15.28■□□□□ 0.04
NPHP4-205ENST00000466897 SCRN2Q96FV2 425 aa15.28■□□□□ 0.04
NPHP4-205ENST00000466897 SPACA7Q96KW9 195 aa15.28■□□□□ 0.04
NPHP4-205ENST00000466897 TBL1YQ9BQ87 522 aa15.28■□□□□ 0.04
NPHP4-205ENST00000466897 ERP44Q9BS26 406 aa15.28■□□□□ 0.04
NPHP4-205ENST00000466897 RAB17Q9H0T7 212 aa15.28■□□□□ 0.04
NPHP4-205ENST00000466897 PCED1AQ9H1Q7 454 aa15.28■□□□□ 0.04
NPHP4-205ENST00000466897 NEUROG2Q9H2A3 272 aa15.28■□□□□ 0.04
NPHP4-205ENST00000466897 PREBQ9HCU5 417 aa15.28■□□□□ 0.04
NPHP4-205ENST00000466897 TPX2Q9ULW0 747 aaKnown RBP15.28■□□□□ 0.04
NPHP4-205ENST00000466897 NUMA1Q14980 2115 aa15.28■□□□□ 0.04
NPHP4-205ENST00000466897 TRPM6Q9BX84 2022 aa15.27■□□□□ 0.04
NPHP4-205ENST00000466897 SPAG17Q6Q759 2223 aa15.27■□□□□ 0.04
NPHP4-205ENST00000466897 IGHV1OR15-9A0A0B4J2B8 117 aa15.27■□□□□ 0.04
NPHP4-205ENST00000466897 CAPN8A6NHC0 703 aa15.27■□□□□ 0.04
NPHP4-205ENST00000466897 H0Y858 1186 aa15.27■□□□□ 0.04
NPHP4-205ENST00000466897 DNALI1O14645 258 aaPredicted RBP15.27■□□□□ 0.04
NPHP4-205ENST00000466897 RIOK3O14730 519 aaKnown RBP15.27■□□□□ 0.04
NPHP4-205ENST00000466897 XPAP23025 273 aaPredicted RBP15.27■□□□□ 0.04
NPHP4-205ENST00000466897 CD6P30203 668 aa15.27■□□□□ 0.04
NPHP4-205ENST00000466897 CNR2P34972 360 aa15.27■□□□□ 0.04
NPHP4-205ENST00000466897 MMP12P39900 470 aa15.27■□□□□ 0.04
NPHP4-205ENST00000466897 ADCY8P40145 1251 aa15.27■□□□□ 0.04
NPHP4-205ENST00000466897 ABL2P42684 1182 aa15.27■□□□□ 0.04
NPHP4-205ENST00000466897 VPS41P49754 854 aa15.27■□□□□ 0.04
NPHP4-205ENST00000466897 EPHB1P54762 984 aa15.27■□□□□ 0.04
NPHP4-205ENST00000466897 DRG2P55039 364 aaKnown RBP15.27■□□□□ 0.04
NPHP4-205ENST00000466897 TAS2R38P59533 333 aa15.27■□□□□ 0.04
NPHP4-205ENST00000466897 ANGPT1Q15389 498 aa15.27■□□□□ 0.04
NPHP4-205ENST00000466897 QPCTQ16769 361 aa15.27■□□□□ 0.04
NPHP4-205ENST00000466897 USP39Q53GS9 565 aaKnown RBP15.27■□□□□ 0.04
NPHP4-205ENST00000466897 SIRPB2Q5JXA9 342 aa15.27■□□□□ 0.04
NPHP4-205ENST00000466897 RNASEH2BQ5TBB1 312 aaKnown RBP15.27■□□□□ 0.04
NPHP4-205ENST00000466897 ARMC3Q5W041 872 aa15.27■□□□□ 0.04
NPHP4-205ENST00000466897 ERAP2Q6P179 960 aa15.27■□□□□ 0.04
NPHP4-205ENST00000466897 TSSK4Q6SA08 328 aa15.27■□□□□ 0.04
NPHP4-205ENST00000466897 C11orf74Q86VG3 221 aa15.27■□□□□ 0.04
NPHP4-205ENST00000466897 HOOK3Q86VS8 718 aa15.27■□□□□ 0.04
NPHP4-205ENST00000466897 PPIL6Q8IXY8 311 aa15.27■□□□□ 0.04
NPHP4-205ENST00000466897 RAVER1Q8IY67 606 aaKnown RBP15.27■□□□□ 0.04
NPHP4-205ENST00000466897 NOA1Q8NC60 698 aaKnown RBP15.27■□□□□ 0.04
NPHP4-205ENST00000466897 BBOF1Q8ND07 529 aa15.27■□□□□ 0.04
NPHP4-205ENST00000466897 MCUQ8NE86 351 aa15.27■□□□□ 0.04
NPHP4-205ENST00000466897 LPCAT1Q8NF37 534 aa15.27■□□□□ 0.04
NPHP4-205ENST00000466897 SEC14L1Q92503 715 aa15.27■□□□□ 0.04
NPHP4-205ENST00000466897 CPT1BQ92523 772 aa15.27■□□□□ 0.04
NPHP4-205ENST00000466897 TRIM51Q9BSJ1 452 aa15.27■□□□□ 0.04
NPHP4-205ENST00000466897 FICDQ9BVA6 458 aa15.27■□□□□ 0.04
NPHP4-205ENST00000466897 TPSD1Q9BZJ3 242 aa15.27■□□□□ 0.04
NPHP4-205ENST00000466897 BTBD1Q9H0C5 482 aa15.27■□□□□ 0.04
NPHP4-205ENST00000466897 MAGEE1Q9HCI5 957 aa15.27■□□□□ 0.04
NPHP4-205ENST00000466897 PCDH12Q9NPG4 1184 aa15.27■□□□□ 0.04
NPHP4-205ENST00000466897 WSB2Q9NYS7 404 aaPredicted RBP15.27■□□□□ 0.04
NPHP4-205ENST00000466897 UTP11Q9Y3A2 253 aaKnown RBP15.27■□□□□ 0.04
NPHP4-205ENST00000466897 FADS3Q9Y5Q0 445 aa15.27■□□□□ 0.04
NPHP4-205ENST00000466897 EFCAB8A8MWE9 144 aa15.26■□□□□ 0.03
NPHP4-205ENST00000466897 F5H423 210 aaPredicted RBP15.26■□□□□ 0.03
NPHP4-205ENST00000466897 SPINT1O43278 529 aa15.26■□□□□ 0.03
NPHP4-205ENST00000466897 TSPAN6O43657 245 aa15.26■□□□□ 0.03
NPHP4-205ENST00000466897 SEC31AO94979 1220 aaKnown RBP15.26■□□□□ 0.03
NPHP4-205ENST00000466897 SP9P0CG40 484 aa15.26■□□□□ 0.03
NPHP4-205ENST00000466897 CYP2A6P11509 494 aaPredicted RBP15.26■□□□□ 0.03
NPHP4-205ENST00000466897 ZNF30P17039 623 aa15.26■□□□□ 0.03
NPHP4-205ENST00000466897 PXNP49023 591 aaPredicted RBP15.26■□□□□ 0.03
NPHP4-205ENST00000466897 LMAN1P49257 510 aa15.26■□□□□ 0.03
NPHP4-205ENST00000466897 TUBB4BP68371 445 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 133.8 ms