RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 GPC4O75487 556 aa13.07□□□□□ -0.32
PDZRN3-205ENST00000466780 IREB2P48200 963 aaKnown RBP13.07□□□□□ -0.32
PDZRN3-205ENST00000466780 KIAA0319Q5VV43 1072 aa13.07□□□□□ -0.32
PDZRN3-205ENST00000466780 ZNF470Q6ECI4 717 aa13.07□□□□□ -0.32
PDZRN3-205ENST00000466780 GPRIN1Q7Z2K8 1008 aa13.07□□□□□ -0.32
PDZRN3-205ENST00000466780 RNF135Q8IUD6 432 aa13.07□□□□□ -0.32
PDZRN3-205ENST00000466780 IPMKQ8NFU5 416 aa13.07□□□□□ -0.32
PDZRN3-205ENST00000466780 ADAMTS16Q8TE57 1224 aa13.07□□□□□ -0.32
PDZRN3-205ENST00000466780 OLFM1Q99784 485 aa13.07□□□□□ -0.32
PDZRN3-205ENST00000466780 MUC3BQ9H195 1237 aa13.07□□□□□ -0.32
PDZRN3-205ENST00000466780 ADAMTS10Q9H324 1103 aa13.07□□□□□ -0.32
PDZRN3-205ENST00000466780 TUBA8Q9NY65 449 aaPredicted RBP13.07□□□□□ -0.32
PDZRN3-205ENST00000466780 COL1A2P08123 1366 aa13.07□□□□□ -0.32
PDZRN3-205ENST00000466780 A0A0G2JLL6 359 aaPredicted RBP13.07□□□□□ -0.32
PDZRN3-205ENST00000466780 ATP6AP2A0A1C7CYW4 349 aa13.07□□□□□ -0.32
PDZRN3-205ENST00000466780 FAM149AA5PLN7 773 aa13.07□□□□□ -0.32
PDZRN3-205ENST00000466780 AP3B1O00203 1094 aa13.07□□□□□ -0.32
PDZRN3-205ENST00000466780 ATP6AP2O75787 350 aa13.07□□□□□ -0.32
PDZRN3-205ENST00000466780 IPO13O94829 963 aaKnown RBP13.07□□□□□ -0.32
PDZRN3-205ENST00000466780 LRIG2O94898 1065 aa13.07□□□□□ -0.32
PDZRN3-205ENST00000466780 ATE1O95260 518 aa13.07□□□□□ -0.32
PDZRN3-205ENST00000466780 MYF6P23409 242 aa13.07□□□□□ -0.32
PDZRN3-205ENST00000466780 IGFBP6P24592 240 aaPredicted RBP13.07□□□□□ -0.32
PDZRN3-205ENST00000466780 DNAJB2P25686 324 aa13.07□□□□□ -0.32
PDZRN3-205ENST00000466780 CD151P48509 253 aa13.07□□□□□ -0.32
PDZRN3-205ENST00000466780 TAF6P49848 677 aa13.07□□□□□ -0.32
PDZRN3-205ENST00000466780 ZNF789Q5FWF6 425 aa13.07□□□□□ -0.32
PDZRN3-205ENST00000466780 CLEC6AQ6EIG7 209 aa13.07□□□□□ -0.32
PDZRN3-205ENST00000466780 CATSPER4Q7RTX7 472 aa13.07□□□□□ -0.32
PDZRN3-205ENST00000466780 LYSMD3Q7Z3D4 306 aa13.07□□□□□ -0.32
PDZRN3-205ENST00000466780 PRRT2Q7Z6L0 340 aaPredicted RBP13.07□□□□□ -0.32
PDZRN3-205ENST00000466780 C2CD4AQ8NCU7 369 aaPredicted RBP13.07□□□□□ -0.32
PDZRN3-205ENST00000466780 CCM2LQ9NUG4 571 aaPredicted RBP13.07□□□□□ -0.32
PDZRN3-205ENST00000466780 DDIT4Q9NX09 232 aa13.07□□□□□ -0.32
PDZRN3-205ENST00000466780 ARHGEF38Q9NXL2 777 aa13.07□□□□□ -0.32
PDZRN3-205ENST00000466780 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.07□□□□□ -0.32
PDZRN3-205ENST00000466780 OR12D3Q9UGF7 316 aa13.07□□□□□ -0.32
PDZRN3-205ENST00000466780 NRCAMQ92823 1304 aa13.07□□□□□ -0.32
PDZRN3-205ENST00000466780 PDCD11Q14690 1871 aaKnown RBP13.06□□□□□ -0.32
PDZRN3-205ENST00000466780 NME4O00746 187 aa13.06□□□□□ -0.32
PDZRN3-205ENST00000466780 HUS1O60921 280 aa13.06□□□□□ -0.32
PDZRN3-205ENST00000466780 ATP6V1G1O75348 118 aa13.06□□□□□ -0.32
PDZRN3-205ENST00000466780 ALDOCP09972 364 aaKnown RBP13.06□□□□□ -0.32
PDZRN3-205ENST00000466780 CPB1P15086 417 aa13.06□□□□□ -0.32
PDZRN3-205ENST00000466780 TPP2P29144 1249 aaPredicted RBP13.06□□□□□ -0.32
PDZRN3-205ENST00000466780 DAOAP59103 153 aa13.06□□□□□ -0.32
PDZRN3-205ENST00000466780 YBX1P67809 324 aaKnown RBP13.06□□□□□ -0.32
PDZRN3-205ENST00000466780 GRIK4Q16099 956 aa13.06□□□□□ -0.32
PDZRN3-205ENST00000466780 TTC33Q6PID6 262 aaPredicted RBP13.06□□□□□ -0.32
PDZRN3-205ENST00000466780 LARP4Q71RC2 724 aaKnown RBP eCLIP13.06□□□□□ -0.32
PDZRN3-205ENST00000466780 PNPLA1Q8N8W4 532 aa13.06□□□□□ -0.32
PDZRN3-205ENST00000466780 SHCBP1Q8NEM2 672 aa13.06□□□□□ -0.32
PDZRN3-205ENST00000466780 ZNF560Q96MR9 790 aa13.06□□□□□ -0.32
PDZRN3-205ENST00000466780 ADI1Q9BV57 179 aa13.06□□□□□ -0.32
PDZRN3-205ENST00000466780 FICDQ9BVA6 458 aa13.06□□□□□ -0.32
PDZRN3-205ENST00000466780 COLEC11Q9BWP8 271 aa13.06□□□□□ -0.32
PDZRN3-205ENST00000466780 UPF3AQ9H1J1 476 aaKnown RBP13.06□□□□□ -0.32
PDZRN3-205ENST00000466780 RNF39Q9H2S5 420 aa13.06□□□□□ -0.32
PDZRN3-205ENST00000466780 SPON1Q9HCB6 807 aa13.06□□□□□ -0.32
PDZRN3-205ENST00000466780 MRGBPQ9NV56 204 aa13.06□□□□□ -0.32
PDZRN3-205ENST00000466780 TBCCD1Q9NVR7 557 aa13.06□□□□□ -0.32
PDZRN3-205ENST00000466780 FBXO5Q9UKT4 447 aa13.06□□□□□ -0.32
PDZRN3-205ENST00000466780 CDH7Q9ULB5 785 aa13.06□□□□□ -0.32
PDZRN3-205ENST00000466780 H3BRB1 525 aa13.06□□□□□ -0.32
PDZRN3-205ENST00000466780 ZNF701M0R085 212 aaPredicted RBP13.06□□□□□ -0.32
PDZRN3-205ENST00000466780 CD4P01730 458 aa13.06□□□□□ -0.32
PDZRN3-205ENST00000466780 NCAM1P13591 858 aa13.06□□□□□ -0.32
PDZRN3-205ENST00000466780 TSPAN8P19075 237 aa13.06□□□□□ -0.32
PDZRN3-205ENST00000466780 WARSP23381 471 aaKnown RBP13.06□□□□□ -0.32
PDZRN3-205ENST00000466780 NME5P56597 212 aa13.06□□□□□ -0.32
PDZRN3-205ENST00000466780 ESRRGP62508 458 aa13.06□□□□□ -0.32
PDZRN3-205ENST00000466780 POU4F1Q01851 419 aa13.06□□□□□ -0.32
PDZRN3-205ENST00000466780 INTS11Q5TA45 600 aaKnown RBP13.06□□□□□ -0.32
PDZRN3-205ENST00000466780 TAPT1Q6NXT6 567 aa13.06□□□□□ -0.32
PDZRN3-205ENST00000466780 ARMCX2Q7L311 632 aa13.06□□□□□ -0.32
PDZRN3-205ENST00000466780 PHF21BQ96EK2 531 aa13.06□□□□□ -0.32
PDZRN3-205ENST00000466780 C3orf30Q96M34 536 aa13.06□□□□□ -0.32
PDZRN3-205ENST00000466780 TSGA13Q96PP4 275 aa13.06□□□□□ -0.32
PDZRN3-205ENST00000466780 GPATCH1Q9BRR8 931 aaKnown RBP13.06□□□□□ -0.32
PDZRN3-205ENST00000466780 NPLQ9BXD5 320 aaPredicted RBP13.06□□□□□ -0.32
PDZRN3-205ENST00000466780 GSTO2Q9H4Y5 243 aa13.06□□□□□ -0.32
PDZRN3-205ENST00000466780 TUT1Q9H6E5 874 aaKnown RBP13.06□□□□□ -0.32
PDZRN3-205ENST00000466780 EML4Q9HC35 981 aaKnown RBP13.06□□□□□ -0.32
PDZRN3-205ENST00000466780 TREX1Q9NSU2 369 aa13.06□□□□□ -0.32
PDZRN3-205ENST00000466780 TMEM30AQ9NV96 361 aa13.06□□□□□ -0.32
PDZRN3-205ENST00000466780 MAP10Q9P2G4 905 aa13.06□□□□□ -0.32
PDZRN3-205ENST00000466780 PTBP2Q9UKA9 531 aaKnown RBP13.06□□□□□ -0.32
PDZRN3-205ENST00000466780 AURKCQ9UQB9 309 aa13.06□□□□□ -0.32
PDZRN3-205ENST00000466780 TCAF1Q9Y4C2 921 aa13.06□□□□□ -0.32
PDZRN3-205ENST00000466780 TRAF6Q9Y4K3 522 aa13.06□□□□□ -0.32
PDZRN3-205ENST00000466780 PSMD3O43242 534 aa13.05□□□□□ -0.32
PDZRN3-205ENST00000466780 HSPA8P11142 646 aaKnown RBP13.05□□□□□ -0.32
PDZRN3-205ENST00000466780 GPX3P22352 226 aa13.05□□□□□ -0.32
PDZRN3-205ENST00000466780 CHRNA4P43681 627 aa13.05□□□□□ -0.32
PDZRN3-205ENST00000466780 KPNA2P52292 529 aaKnown RBP13.05□□□□□ -0.32
PDZRN3-205ENST00000466780 LILRA4P59901 499 aa13.05□□□□□ -0.32
PDZRN3-205ENST00000466780 TBCELQ5QJ74 424 aa13.05□□□□□ -0.32
PDZRN3-205ENST00000466780 PATL1Q86TB9 770 aaKnown RBP13.05□□□□□ -0.32
PDZRN3-205ENST00000466780 ERO1BQ86YB8 467 aa13.05□□□□□ -0.32
PDZRN3-205ENST00000466780 SPPL2CQ8IUH8 684 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms