RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 CDKN1AP38936 164 aa5.06□□□□□ -1.6
SMC4-205ENST00000465563 FUT6P51993 359 aa5.06□□□□□ -1.6
SMC4-205ENST00000465563 SOWAHAQ2M3V2 549 aa5.06□□□□□ -1.6
SMC4-205ENST00000465563 EDRF1Q3B7T1 1238 aa5.06□□□□□ -1.6
SMC4-205ENST00000465563 CTXN3Q4LDR2 81 aa5.06□□□□□ -1.6
SMC4-205ENST00000465563 ESCO2Q56NI9 601 aa5.06□□□□□ -1.6
SMC4-205ENST00000465563 PLA2G4FQ68DD2 849 aa5.06□□□□□ -1.6
SMC4-205ENST00000465563 PLEKHA7Q6IQ23 1121 aa5.06□□□□□ -1.6
SMC4-205ENST00000465563 JMJD6Q6NYC1 403 aaPredicted RBP5.06□□□□□ -1.6
SMC4-205ENST00000465563 C1orf228Q6PIY5 440 aa5.06□□□□□ -1.6
SMC4-205ENST00000465563 C19orf48Q6RUI8 117 aa5.06□□□□□ -1.6
SMC4-205ENST00000465563 SLC26A9Q7LBE3 791 aa5.06□□□□□ -1.6
SMC4-205ENST00000465563 WDSUB1Q8N9V3 476 aa5.06□□□□□ -1.6
SMC4-205ENST00000465563 TTC14Q96N46 770 aa5.06□□□□□ -1.6
SMC4-205ENST00000465563 ZNF700Q9H0M5 742 aa5.06□□□□□ -1.6
SMC4-205ENST00000465563 FBRSL1Q9HCM7 1045 aaKnown RBP5.06□□□□□ -1.6
SMC4-205ENST00000465563 KCNS2Q9ULS6 477 aa5.06□□□□□ -1.6
SMC4-205ENST00000465563 SUFUQ9UMX1 484 aa5.06□□□□□ -1.6
SMC4-205ENST00000465563 PCDHGB5Q9Y5G0 923 aa5.06□□□□□ -1.6
SMC4-205ENST00000465563 KRTAP9-6A8MVA2 160 aa5.05□□□□□ -1.6
SMC4-205ENST00000465563 NDUFS7O75251 213 aa5.05□□□□□ -1.6
SMC4-205ENST00000465563 RFPL2O75678 378 aa5.05□□□□□ -1.6
SMC4-205ENST00000465563 MTA2O94776 668 aa5.05□□□□□ -1.6
SMC4-205ENST00000465563 APOHP02749 345 aaPredicted RBP5.05□□□□□ -1.6
SMC4-205ENST00000465563 GPTP24298 496 aa5.05□□□□□ -1.6
SMC4-205ENST00000465563 HNRNPH1P31943 449 aaKnown RBP5.05□□□□□ -1.6
SMC4-205ENST00000465563 STX2P32856 288 aa5.05□□□□□ -1.6
SMC4-205ENST00000465563 ADD2P35612 726 aa5.05□□□□□ -1.6
SMC4-205ENST00000465563 IL15P40933 162 aaPredicted RBP5.05□□□□□ -1.6
SMC4-205ENST00000465563 ATP12AP54707 1039 aa5.05□□□□□ -1.6
SMC4-205ENST00000465563 RUNX2Q13950 521 aa5.05□□□□□ -1.6
SMC4-205ENST00000465563 EFNB3Q15768 340 aa5.05□□□□□ -1.6
SMC4-205ENST00000465563 KRT71Q3SY84 523 aa5.05□□□□□ -1.6
SMC4-205ENST00000465563 PPP6R3Q5H9R7 873 aaPredicted RBP5.05□□□□□ -1.6
SMC4-205ENST00000465563 KRTAP5-1Q6L8H4 278 aa5.05□□□□□ -1.6
SMC4-205ENST00000465563 CCNI2Q6ZMN8 369 aaPredicted RBP5.05□□□□□ -1.6
SMC4-205ENST00000465563 PARP16Q8N5Y8 322 aa5.05□□□□□ -1.6
SMC4-205ENST00000465563 CTCFLQ8NI51 663 aaPredicted RBP5.05□□□□□ -1.6
SMC4-205ENST00000465563 ERGIC1Q969X5 290 aa5.05□□□□□ -1.6
SMC4-205ENST00000465563 TRMT61BQ9BVS5 477 aaKnown RBP5.05□□□□□ -1.6
SMC4-205ENST00000465563 MMP24Q9Y5R2 645 aa5.05□□□□□ -1.6
SMC4-205ENST00000465563 A0A1W2PS18 150 aa5.04□□□□□ -1.6
SMC4-205ENST00000465563 ARHGAP10A1A4S6 786 aa5.04□□□□□ -1.6
SMC4-205ENST00000465563 ANTXRLA6NF34 631 aa5.04□□□□□ -1.6
SMC4-205ENST00000465563 F5H423 210 aaPredicted RBP5.04□□□□□ -1.6
SMC4-205ENST00000465563 EDIL3O43854 480 aa5.04□□□□□ -1.6
SMC4-205ENST00000465563 TK1P04183 234 aa5.04□□□□□ -1.6
SMC4-205ENST00000465563 MARK3P27448 753 aa5.04□□□□□ -1.6
SMC4-205ENST00000465563 ERVK11-1P61568 191 aa5.04□□□□□ -1.6
SMC4-205ENST00000465563 PAPPA-AS1Q5QFB9 102 aa5.04□□□□□ -1.6
SMC4-205ENST00000465563 CIARTQ8N365 385 aaPredicted RBP5.04□□□□□ -1.6
SMC4-205ENST00000465563 CPXM2Q8N436 756 aa5.04□□□□□ -1.6
SMC4-205ENST00000465563 TMEM57Q8N5G2 664 aa5.04□□□□□ -1.6
SMC4-205ENST00000465563 GJC3Q8NFK1 279 aa5.04□□□□□ -1.6
SMC4-205ENST00000465563 SPATA22Q8NHS9 363 aa5.04□□□□□ -1.6
SMC4-205ENST00000465563 POF1BQ8WVV4 589 aa5.04□□□□□ -1.6
SMC4-205ENST00000465563 TAF15Q92804 592 aaKnown RBP eCLIP5.04□□□□□ -1.6
SMC4-205ENST00000465563 C1QTNF5Q9BXJ0 243 aa5.04□□□□□ -1.6
SMC4-205ENST00000465563 PLCB1Q9NQ66 1216 aa5.04□□□□□ -1.6
SMC4-205ENST00000465563 POU2F3Q9UKI9 436 aa5.04□□□□□ -1.6
SMC4-205ENST00000465563 SNED1Q8TER0 1413 aa5.04□□□□□ -1.6
SMC4-205ENST00000465563 C17orf113A0A1B0GUU1 675 aa5.03□□□□□ -1.6
SMC4-205ENST00000465563 KLRF2D3W0D1 207 aa5.03□□□□□ -1.6
SMC4-205ENST00000465563 SOCS6O14544 535 aa5.03□□□□□ -1.6
SMC4-205ENST00000465563 ANP32CO43423 234 aa5.03□□□□□ -1.6
SMC4-205ENST00000465563 PCNAP12004 261 aa5.03□□□□□ -1.6
SMC4-205ENST00000465563 PTPN2P17706 415 aa5.03□□□□□ -1.6
SMC4-205ENST00000465563 TAF6P49848 677 aa5.03□□□□□ -1.6
SMC4-205ENST00000465563 BLKP51451 505 aa5.03□□□□□ -1.6
SMC4-205ENST00000465563 ACTR2P61160 394 aa5.03□□□□□ -1.6
SMC4-205ENST00000465563 SYCP2LQ5T4T6 812 aa5.03□□□□□ -1.6
SMC4-205ENST00000465563 WDR73Q6P4I2 378 aa5.03□□□□□ -1.6
SMC4-205ENST00000465563 SLC9B2Q86UD5 537 aa5.03□□□□□ -1.6
SMC4-205ENST00000465563 TBC1D26Q86UD7 250 aa5.03□□□□□ -1.6
SMC4-205ENST00000465563 EPHX4Q8IUS5 362 aa5.03□□□□□ -1.6
SMC4-205ENST00000465563 AFG1LQ8WV93 481 aa5.03□□□□□ -1.6
SMC4-205ENST00000465563 RAB40AQ8WXH6 277 aa5.03□□□□□ -1.6
SMC4-205ENST00000465563 CNOT9Q92600 299 aaKnown RBP5.03□□□□□ -1.6
SMC4-205ENST00000465563 ABCF3Q9NUQ8 709 aa5.03□□□□□ -1.6
SMC4-205ENST00000465563 KIF17Q9P2E2 1029 aa5.03□□□□□ -1.6
SMC4-205ENST00000465563 A0A0U1RQF3 1178 aa5.02□□□□□ -1.61
SMC4-205ENST00000465563 CBY3A6NI87 242 aa5.02□□□□□ -1.61
SMC4-205ENST00000465563 HSPB2A8KAH6 182 aa5.02□□□□□ -1.61
SMC4-205ENST00000465563 PLRG1O43660 514 aaKnown RBP5.02□□□□□ -1.61
SMC4-205ENST00000465563 CEP104O60308 925 aa5.02□□□□□ -1.61
SMC4-205ENST00000465563 AMBPP02760 352 aa5.02□□□□□ -1.61
SMC4-205ENST00000465563 CD58P19256 250 aa5.02□□□□□ -1.61
SMC4-205ENST00000465563 CHATP28329 748 aa5.02□□□□□ -1.61
SMC4-205ENST00000465563 TIMP3P35625 211 aa5.02□□□□□ -1.61
SMC4-205ENST00000465563 NR1H2P55055 460 aa5.02□□□□□ -1.61
SMC4-205ENST00000465563 YWHAZP63104 245 aaKnown RBP5.02□□□□□ -1.61
SMC4-205ENST00000465563 NEDD9Q14511 834 aa5.02□□□□□ -1.61
SMC4-205ENST00000465563 HSPB2Q16082 182 aa5.02□□□□□ -1.61
SMC4-205ENST00000465563 IRAK1BP1Q5VVH5 260 aa5.02□□□□□ -1.61
SMC4-205ENST00000465563 KRBA2Q6ZNG9 492 aa5.02□□□□□ -1.61
SMC4-205ENST00000465563 DMBX1Q8NFW5 382 aa5.02□□□□□ -1.61
SMC4-205ENST00000465563 SNAPC3Q92966 411 aa5.02□□□□□ -1.61
SMC4-205ENST00000465563 ZC3HAV1LQ96H79 300 aaKnown RBP5.02□□□□□ -1.61
SMC4-205ENST00000465563 PAGR1Q9BTK6 254 aa5.02□□□□□ -1.61
SMC4-205ENST00000465563 LMAN2LQ9H0V9 348 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms