RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-223	ENST00000465278	QTRT1	Q9BXR0	403 aa	Known RBP	5.41	□□□□□ -1.54
CACNA1C-223	ENST00000465278	PDGFC	Q9NRA1	345 aa		5.41	□□□□□ -1.54
CACNA1C-223	ENST00000465278	MTMR4	Q9NYA4	1195 aa		5.41	□□□□□ -1.54
CACNA1C-223	ENST00000465278	C9orf78	Q9NZ63	289 aa	Predicted RBP	5.41	□□□□□ -1.54
CACNA1C-223	ENST00000465278	RRP7A	Q9Y3A4	280 aa	Known RBP	5.41	□□□□□ -1.54
CACNA1C-223	ENST00000465278	COX11	Q9Y6N1	276 aa		5.41	□□□□□ -1.54
CACNA1C-223	ENST00000465278		R4GN57	208 aa		5.41	□□□□□ -1.54
CACNA1C-223	ENST00000465278	UBN2	Q6ZU65	1347 aa		5.41	□□□□□ -1.54
CACNA1C-223	ENST00000465278	SMCHD1	A6NHR9	2005 aa		5.4	□□□□□ -1.54
CACNA1C-223	ENST00000465278	ZFHX3	Q15911	3703 aa		5.4	□□□□□ -1.54
CACNA1C-223	ENST00000465278	SPEF2	Q9C093	1822 aa		5.4	□□□□□ -1.54
CACNA1C-223	ENST00000465278	MBD3L5	A6NJ08	208 aa	Predicted RBP	5.4	□□□□□ -1.54
CACNA1C-223	ENST00000465278	GRM8	O00222	908 aa		5.4	□□□□□ -1.54
CACNA1C-223	ENST00000465278	PRB1	P04280	392 aa		5.4	□□□□□ -1.54
CACNA1C-223	ENST00000465278	POLB	P06746	335 aa		5.4	□□□□□ -1.54
CACNA1C-223	ENST00000465278	ZNF853	P0CG23	659 aa		5.4	□□□□□ -1.54
CACNA1C-223	ENST00000465278	CPA1	P15085	419 aa		5.4	□□□□□ -1.54
CACNA1C-223	ENST00000465278	ST6GAL1	P15907	406 aa		5.4	□□□□□ -1.54
CACNA1C-223	ENST00000465278	PAPOLA	P51003	745 aa	Known RBP	5.4	□□□□□ -1.54
CACNA1C-223	ENST00000465278	PPAT	Q06203	517 aa		5.4	□□□□□ -1.54
CACNA1C-223	ENST00000465278	CDK18	Q07002	472 aa		5.4	□□□□□ -1.54
CACNA1C-223	ENST00000465278	ANXA2R	Q3ZCQ2	193 aa		5.4	□□□□□ -1.54
CACNA1C-223	ENST00000465278	MIS18BP1	Q6P0N0	1132 aa		5.4	□□□□□ -1.54
CACNA1C-223	ENST00000465278	ZNF66	Q6ZN08	573 aa		5.4	□□□□□ -1.54
CACNA1C-223	ENST00000465278	ANKS1B	Q7Z6G8	1248 aa		5.4	□□□□□ -1.54
CACNA1C-223	ENST00000465278	RFX6	Q8HWS3	928 aa		5.4	□□□□□ -1.54
CACNA1C-223	ENST00000465278	RHPN2	Q8IUC4	686 aa		5.4	□□□□□ -1.54
CACNA1C-223	ENST00000465278	ADGRF3	Q8IZF5	1079 aa		5.4	□□□□□ -1.54
CACNA1C-223	ENST00000465278	SUMF1	Q8NBK3	374 aa		5.4	□□□□□ -1.54
CACNA1C-223	ENST00000465278	OSR1	Q8TAX0	266 aa	Predicted RBP	5.4	□□□□□ -1.54
CACNA1C-223	ENST00000465278	TBC1D16	Q8TBP0	767 aa		5.4	□□□□□ -1.54
CACNA1C-223	ENST00000465278	STAM	Q92783	540 aa		5.4	□□□□□ -1.54
CACNA1C-223	ENST00000465278	MAP4K1	Q92918	833 aa		5.4	□□□□□ -1.54
CACNA1C-223	ENST00000465278	FCRL5	Q96RD9	977 aa		5.4	□□□□□ -1.54
CACNA1C-223	ENST00000465278	PAIP2	Q9BPZ3	127 aa	Known RBP	5.4	□□□□□ -1.54
CACNA1C-223	ENST00000465278	GATA5	Q9BWX5	397 aa	Predicted RBP	5.4	□□□□□ -1.54
CACNA1C-223	ENST00000465278	RNF26	Q9BY78	433 aa	Predicted RBP	5.4	□□□□□ -1.54
CACNA1C-223	ENST00000465278	CLPB	Q9H078	707 aa		5.4	□□□□□ -1.54
CACNA1C-223	ENST00000465278	TLR8	Q9NR97	1041 aa	Known RBP	5.4	□□□□□ -1.54
CACNA1C-223	ENST00000465278	TBX21	Q9UL17	535 aa		5.4	□□□□□ -1.54
CACNA1C-223	ENST00000465278	PATJ	Q8NI35	1801 aa		5.39	□□□□□ -1.55
CACNA1C-223	ENST00000465278	KIAA1217	Q5T5P2	1943 aa		5.39	□□□□□ -1.55
CACNA1C-223	ENST00000465278	C3orf70	A6NLC5	250 aa	Predicted RBP	5.39	□□□□□ -1.55
CACNA1C-223	ENST00000465278	LINC01548	A6NM66	108 aa		5.39	□□□□□ -1.55
CACNA1C-223	ENST00000465278	LOC730098	B7Z3J9	87 aa		5.39	□□□□□ -1.55
CACNA1C-223	ENST00000465278	DSCR3	O14972	297 aa		5.39	□□□□□ -1.55
CACNA1C-223	ENST00000465278	MBTPS2	O43462	519 aa		5.39	□□□□□ -1.55
CACNA1C-223	ENST00000465278	CNTN5	O94779	1100 aa		5.39	□□□□□ -1.55
CACNA1C-223	ENST00000465278	ACP5	P13686	325 aa		5.39	□□□□□ -1.55
CACNA1C-223	ENST00000465278	CYP2B6	P20813	491 aa		5.39	□□□□□ -1.55
CACNA1C-223	ENST00000465278	TACR3	P29371	465 aa		5.39	□□□□□ -1.55
CACNA1C-223	ENST00000465278	CDC37	Q16543	378 aa	Predicted RBP	5.39	□□□□□ -1.55
CACNA1C-223	ENST00000465278	TMEM88	Q6PEY1	159 aa		5.39	□□□□□ -1.55
CACNA1C-223	ENST00000465278	KRBA2	Q6ZNG9	492 aa		5.39	□□□□□ -1.55
CACNA1C-223	ENST00000465278	CPO	Q8IVL8	374 aa		5.39	□□□□□ -1.55
CACNA1C-223	ENST00000465278	ZNF398	Q8TD17	642 aa		5.39	□□□□□ -1.55
CACNA1C-223	ENST00000465278	NELL1	Q92832	810 aa		5.39	□□□□□ -1.55
CACNA1C-223	ENST00000465278	ITFG2	Q969R8	447 aa		5.39	□□□□□ -1.55
CACNA1C-223	ENST00000465278	PABPC5	Q96DU9	382 aa	Known RBP	5.39	□□□□□ -1.55
CACNA1C-223	ENST00000465278	KTI12	Q96EK9	354 aa	Predicted RBP	5.39	□□□□□ -1.55
CACNA1C-223	ENST00000465278	MAEL	Q96JY0	434 aa	Known RBP	5.39	□□□□□ -1.55
CACNA1C-223	ENST00000465278	ZNF347	Q96SE7	839 aa		5.39	□□□□□ -1.55
CACNA1C-223	ENST00000465278	EIF2AK1	Q9BQI3	630 aa	Known RBP	5.39	□□□□□ -1.55
CACNA1C-223	ENST00000465278	HDHD5	Q9BXW7	423 aa		5.39	□□□□□ -1.55
CACNA1C-223	ENST00000465278	KLHL13	Q9P2N7	655 aa		5.39	□□□□□ -1.55
CACNA1C-223	ENST00000465278	MAFF	Q9ULX9	164 aa		5.39	□□□□□ -1.55
CACNA1C-223	ENST00000465278	DNAJC16	Q9Y2G8	782 aa		5.39	□□□□□ -1.55
CACNA1C-223	ENST00000465278	SPG11	Q96JI7	2443 aa		5.39	□□□□□ -1.55
CACNA1C-223	ENST00000465278	DOCK1	Q14185	1865 aa		5.39	□□□□□ -1.55
CACNA1C-223	ENST00000465278	TANC1	Q9C0D5	1861 aa		5.39	□□□□□ -1.55
CACNA1C-223	ENST00000465278		A0A1B0GUL7	405 aa		5.38	□□□□□ -1.55
CACNA1C-223	ENST00000465278	CLRN2	A0PK11	232 aa		5.38	□□□□□ -1.55
CACNA1C-223	ENST00000465278	RRN3P2	A6NIE6	340 aa		5.38	□□□□□ -1.55
CACNA1C-223	ENST00000465278	SEPT4	O43236	478 aa		5.38	□□□□□ -1.55
CACNA1C-223	ENST00000465278	HNRNPR	O43390	633 aa	Known RBP	5.38	□□□□□ -1.55
CACNA1C-223	ENST00000465278	HTATSF1	O43719	755 aa	Known RBP	5.38	□□□□□ -1.55
CACNA1C-223	ENST00000465278	KIF1C	O43896	1103 aa	Known RBP	5.38	□□□□□ -1.55
CACNA1C-223	ENST00000465278	ZNF500	O60304	480 aa	Predicted RBP	5.38	□□□□□ -1.55
CACNA1C-223	ENST00000465278	RNF8	O76064	485 aa		5.38	□□□□□ -1.55
CACNA1C-223	ENST00000465278	CSF1	P09603	554 aa		5.38	□□□□□ -1.55
CACNA1C-223	ENST00000465278	IGFBP2	P18065	325 aa		5.38	□□□□□ -1.55
CACNA1C-223	ENST00000465278	PRKAR2B	P31323	418 aa		5.38	□□□□□ -1.55
CACNA1C-223	ENST00000465278	ZNF268	Q14587	947 aa	Predicted RBP	5.38	□□□□□ -1.55
CACNA1C-223	ENST00000465278	GLE1	Q53GS7	698 aa	Known RBP	5.38	□□□□□ -1.55
CACNA1C-223	ENST00000465278	MTFR2	Q6P444	385 aa		5.38	□□□□□ -1.55
CACNA1C-223	ENST00000465278	ZNF813	Q6ZN06	617 aa		5.38	□□□□□ -1.55
CACNA1C-223	ENST00000465278	ANKRD33	Q7Z3H0	272 aa		5.38	□□□□□ -1.55
CACNA1C-223	ENST00000465278	TMEM200A	Q86VY9	491 aa		5.38	□□□□□ -1.55
CACNA1C-223	ENST00000465278	UEVLD	Q8IX04	471 aa		5.38	□□□□□ -1.55
CACNA1C-223	ENST00000465278	CCDC105	Q8IYK2	499 aa		5.38	□□□□□ -1.55
CACNA1C-223	ENST00000465278	VPS52	Q8N1B4	723 aa		5.38	□□□□□ -1.55
CACNA1C-223	ENST00000465278	TMEM199	Q8N511	208 aa		5.38	□□□□□ -1.55
CACNA1C-223	ENST00000465278	ANKRD13C	Q8N6S4	541 aa		5.38	□□□□□ -1.55
CACNA1C-223	ENST00000465278	PTGR2	Q8N8N7	351 aa	Predicted RBP	5.38	□□□□□ -1.55
CACNA1C-223	ENST00000465278	EVI5L	Q96CN4	794 aa		5.38	□□□□□ -1.55
CACNA1C-223	ENST00000465278	ADAD1	Q96M93	576 aa	Known RBP	5.38	□□□□□ -1.55
CACNA1C-223	ENST00000465278	MXD3	Q9BW11	206 aa		5.38	□□□□□ -1.55
CACNA1C-223	ENST00000465278	SLITRK6	Q9H5Y7	841 aa		5.38	□□□□□ -1.55
CACNA1C-223	ENST00000465278	NOD2	Q9HC29	1040 aa		5.38	□□□□□ -1.55
CACNA1C-223	ENST00000465278	FBXO4	Q9UKT5	387 aa		5.38	□□□□□ -1.55

Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms