RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 ZKSCAN5Q9Y2L8 839 aa17.18■□□□□ 0.34
VPS52-215ENST00000464425 PCDHGC4Q9Y5F7 938 aa17.18■□□□□ 0.34
VPS52-215ENST00000464425 TRPM6Q9BX84 2022 aa17.18■□□□□ 0.34
VPS52-215ENST00000464425 CNOT1A5YKK6 2376 aaKnown RBP17.17■□□□□ 0.34
VPS52-215ENST00000464425 hCG_1818297A0A087WSY0 165 aa17.17■□□□□ 0.34
VPS52-215ENST00000464425 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.17■□□□□ 0.34
VPS52-215ENST00000464425 UPK3BL1B0FP48 263 aa17.17■□□□□ 0.34
VPS52-215ENST00000464425 UPK3BL2E5RIL1 263 aa17.17■□□□□ 0.34
VPS52-215ENST00000464425 H0Y8X5 98 aa17.17■□□□□ 0.34
VPS52-215ENST00000464425 TLR4O00206 839 aa17.17■□□□□ 0.34
VPS52-215ENST00000464425 TRAFD1O14545 582 aaPredicted RBP17.17■□□□□ 0.34
VPS52-215ENST00000464425 CST8O60676 142 aa17.17■□□□□ 0.34
VPS52-215ENST00000464425 NEBLO76041 1014 aa17.17■□□□□ 0.34
VPS52-215ENST00000464425 CER1O95813 267 aa17.17■□□□□ 0.34
VPS52-215ENST00000464425 CCNB1P14635 433 aa17.17■□□□□ 0.34
VPS52-215ENST00000464425 HNRNPA2B1P22626 353 aaKnown RBP17.17■□□□□ 0.34
VPS52-215ENST00000464425 AKT2P31751 481 aa17.17■□□□□ 0.34
VPS52-215ENST00000464425 CTSKP43235 329 aa17.17■□□□□ 0.34
VPS52-215ENST00000464425 CLDN2P57739 230 aa17.17■□□□□ 0.34
VPS52-215ENST00000464425 ADCY2Q08462 1091 aa17.17■□□□□ 0.34
VPS52-215ENST00000464425 AP1B1Q10567 949 aa17.17■□□□□ 0.34
VPS52-215ENST00000464425 BRAT1Q6PJG6 821 aa17.17■□□□□ 0.34
VPS52-215ENST00000464425 MFSD2AQ8NA29 543 aa17.17■□□□□ 0.34
VPS52-215ENST00000464425 TMEM145Q8NBT3 493 aa17.17■□□□□ 0.34
VPS52-215ENST00000464425 CXorf40AQ8TE69 158 aa17.17■□□□□ 0.34
VPS52-215ENST00000464425 PDCD6IPQ8WUM4 868 aaKnown RBP17.17■□□□□ 0.34
VPS52-215ENST00000464425 MAML1Q92585 1016 aa17.17■□□□□ 0.34
VPS52-215ENST00000464425 HDAC11Q96DB2 347 aa17.17■□□□□ 0.34
VPS52-215ENST00000464425 SEMA3CQ99985 751 aa17.17■□□□□ 0.34
VPS52-215ENST00000464425 CARD9Q9H257 536 aa17.17■□□□□ 0.34
VPS52-215ENST00000464425 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.17■□□□□ 0.34
VPS52-215ENST00000464425 TTLL3Q9Y4R7 772 aa17.17■□□□□ 0.34
VPS52-215ENST00000464425 KCNK1O00180 336 aa17.16■□□□□ 0.34
VPS52-215ENST00000464425 RAD51BO15315 384 aa17.16■□□□□ 0.34
VPS52-215ENST00000464425 JCHAINP01591 159 aa17.16■□□□□ 0.34
VPS52-215ENST00000464425 NR2C2P49116 596 aa17.16■□□□□ 0.34
VPS52-215ENST00000464425 FAM193AP78312 1265 aa17.16■□□□□ 0.34
VPS52-215ENST00000464425 PPIDQ08752 370 aaKnown RBP17.16■□□□□ 0.34
VPS52-215ENST00000464425 PDK1Q15118 436 aa17.16■□□□□ 0.34
VPS52-215ENST00000464425 ERAP2Q6P179 960 aa17.16■□□□□ 0.34
VPS52-215ENST00000464425 SLC35F6Q8N357 371 aa17.16■□□□□ 0.34
VPS52-215ENST00000464425 FATE1Q969F0 183 aa17.16■□□□□ 0.34
VPS52-215ENST00000464425 ECHDC3Q96DC8 303 aa17.16■□□□□ 0.34
VPS52-215ENST00000464425 KLHDC7BQ96G42 594 aa17.16■□□□□ 0.34
VPS52-215ENST00000464425 C1QTNF2Q9BXJ5 285 aa17.16■□□□□ 0.34
VPS52-215ENST00000464425 HEMGNQ9BXL5 484 aa17.16■□□□□ 0.34
VPS52-215ENST00000464425 OSBPL8Q9BZF1 889 aa17.16■□□□□ 0.34
VPS52-215ENST00000464425 TM7SF3Q9NS93 570 aa17.16■□□□□ 0.34
VPS52-215ENST00000464425 ATP8A1Q9Y2Q0 1164 aa17.16■□□□□ 0.34
VPS52-215ENST00000464425 SPTBN2O15020 2390 aa17.16■□□□□ 0.34
VPS52-215ENST00000464425 A8MX80 341 aa17.15■□□□□ 0.34
VPS52-215ENST00000464425 RIOK3O14730 519 aaKnown RBP17.15■□□□□ 0.34
VPS52-215ENST00000464425 HLA-DQB2P05538 268 aa17.15■□□□□ 0.34
VPS52-215ENST00000464425 CD59P13987 128 aa17.15■□□□□ 0.34
VPS52-215ENST00000464425 TGM2P21980 687 aa17.15■□□□□ 0.34
VPS52-215ENST00000464425 SUOXP51687 545 aa17.15■□□□□ 0.34
VPS52-215ENST00000464425 NXPH1P58417 271 aa17.15■□□□□ 0.34
VPS52-215ENST00000464425 GNG11P61952 73 aa17.15■□□□□ 0.34
VPS52-215ENST00000464425 POLR2LP62875 67 aaKnown RBP17.15■□□□□ 0.34
VPS52-215ENST00000464425 IL9RQ01113 521 aa17.15■□□□□ 0.34
VPS52-215ENST00000464425 DSC2Q02487 901 aa17.15■□□□□ 0.34
VPS52-215ENST00000464425 ELP6Q0PNE2 266 aa17.15■□□□□ 0.34
VPS52-215ENST00000464425 TRAF2Q12933 501 aa17.15■□□□□ 0.34
VPS52-215ENST00000464425 TMEM52BQ4KMG9 183 aa17.15■□□□□ 0.34
VPS52-215ENST00000464425 PPM1JQ5JR12 505 aa17.15■□□□□ 0.34
VPS52-215ENST00000464425 BBS12Q6ZW61 710 aa17.15■□□□□ 0.34
VPS52-215ENST00000464425 BZW1Q7L1Q6 419 aaKnown RBP17.15■□□□□ 0.34
VPS52-215ENST00000464425 SPATS2Q86XZ4 545 aaKnown RBP17.15■□□□□ 0.34
VPS52-215ENST00000464425 DEFB124Q8NES8 71 aa17.15■□□□□ 0.34
VPS52-215ENST00000464425 HAUS1Q96CS2 278 aa17.15■□□□□ 0.34
VPS52-215ENST00000464425 OLFM3Q96PB7 478 aa17.15■□□□□ 0.34
VPS52-215ENST00000464425 POLR1EQ9GZS1 481 aaKnown RBP17.15■□□□□ 0.34
VPS52-215ENST00000464425 GDF3Q9NR23 364 aa17.15■□□□□ 0.34
VPS52-215ENST00000464425 SEPT10Q9P0V9 454 aa17.15■□□□□ 0.34
VPS52-215ENST00000464425 COQ6Q9Y2Z9 468 aa17.15■□□□□ 0.34
VPS52-215ENST00000464425 CABIN1Q9Y6J0 2220 aa17.15■□□□□ 0.34
VPS52-215ENST00000464425 GIPC1O14908 333 aa17.14■□□□□ 0.33
VPS52-215ENST00000464425 PPP1R12AO14974 1030 aaPredicted RBP17.14■□□□□ 0.33
VPS52-215ENST00000464425 HTRA2O43464 458 aaPredicted RBP17.14■□□□□ 0.33
VPS52-215ENST00000464425 TM7SF2O76062 418 aa17.14■□□□□ 0.33
VPS52-215ENST00000464425 TJP3O95049 919 aa17.14■□□□□ 0.33
VPS52-215ENST00000464425 THEGLP0DJG4 465 aa17.14■□□□□ 0.33
VPS52-215ENST00000464425 PECAM1P16284 738 aaPredicted RBP17.14■□□□□ 0.33
VPS52-215ENST00000464425 ZBTB17Q13105 803 aa17.14■□□□□ 0.33
VPS52-215ENST00000464425 ZNF211Q13398 564 aaPredicted RBP17.14■□□□□ 0.33
VPS52-215ENST00000464425 ZNF423Q2M1K9 1284 aa17.14■□□□□ 0.33
VPS52-215ENST00000464425 RALGPS1Q5JS13 557 aa17.14■□□□□ 0.33
VPS52-215ENST00000464425 GCNT7Q6ZNI0 430 aa17.14■□□□□ 0.33
VPS52-215ENST00000464425 IQCHQ86VS3 1027 aa17.14■□□□□ 0.33
VPS52-215ENST00000464425 ZSCAN30Q86W11 494 aa17.14■□□□□ 0.33
VPS52-215ENST00000464425 C17orf53Q8N3J3 647 aaPredicted RBP17.14■□□□□ 0.33
VPS52-215ENST00000464425 BMFQ96LC9 184 aa17.14■□□□□ 0.33
VPS52-215ENST00000464425 CAMK1GQ96NX5 476 aa17.14■□□□□ 0.33
VPS52-215ENST00000464425 CEP41Q9BYV8 373 aa17.14■□□□□ 0.33
VPS52-215ENST00000464425 PCDHB9Q9Y5E1 797 aa17.14■□□□□ 0.33
VPS52-215ENST00000464425 RAI2Q9Y5P3 530 aa17.14■□□□□ 0.33
VPS52-215ENST00000464425 HS3ST3A1Q9Y663 406 aa17.14■□□□□ 0.33
VPS52-215ENST00000464425 POM121BA6NF01 834 aa17.13■□□□□ 0.33
VPS52-215ENST00000464425 GOLGA8CPA6NN73 597 aa17.13■□□□□ 0.33
VPS52-215ENST00000464425 ENC1O14682 589 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms