RNA–Protein interactions for RNA: ENST00000463965.1

SURF1-203, Transcript of SURF1, cytochrome c oxidase assembly factor, humanhuman

TSL 3

Gene SURF1, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF1-203ENST00000463965 GAREM1Q9H706 876 aa26.36■■□□□ 1.81
SURF1-203ENST00000463965 DNAAF2Q9NVR5 837 aaKnown RBP26.36■■□□□ 1.81
SURF1-203ENST00000463965 SAE1Q9UBE0 346 aaPredicted RBP26.36■■□□□ 1.81
SURF1-203ENST00000463965 SNX11Q9Y5W9 270 aa26.36■■□□□ 1.81
SURF1-203ENST00000463965 CAPN6Q9Y6Q1 641 aa26.36■■□□□ 1.81
SURF1-203ENST00000463965 A0A1W2PR77 199 aa26.35■■□□□ 1.81
SURF1-203ENST00000463965 APOC4-APOC2K7ER74 178 aa26.35■■□□□ 1.81
SURF1-203ENST00000463965 TLR4O00206 839 aa26.35■■□□□ 1.81
SURF1-203ENST00000463965 WNT9AO14904 365 aa26.35■■□□□ 1.81
SURF1-203ENST00000463965 SPINT1O43278 529 aa26.35■■□□□ 1.81
SURF1-203ENST00000463965 MTSS1O43312 755 aa26.35■■□□□ 1.81
SURF1-203ENST00000463965 DFNA5O60443 496 aa26.35■■□□□ 1.81
SURF1-203ENST00000463965 MMP20O60882 483 aa26.35■■□□□ 1.81
SURF1-203ENST00000463965 TJP3O95049 919 aa26.35■■□□□ 1.81
SURF1-203ENST00000463965 CPP00450 1065 aa26.35■■□□□ 1.81
SURF1-203ENST00000463965 APOC2P02655 101 aa26.35■■□□□ 1.81
SURF1-203ENST00000463965 HLA-DQB2P05538 268 aa26.35■■□□□ 1.81
SURF1-203ENST00000463965 PECAM1P16284 738 aaPredicted RBP26.35■■□□□ 1.81
SURF1-203ENST00000463965 LAMA1P25391 3075 aa26.35■■□□□ 1.81
SURF1-203ENST00000463965 HLA-BQ31612 363 aa26.35■■□□□ 1.81
SURF1-203ENST00000463965 ZSWIM9Q86XI8 627 aa26.35■■□□□ 1.81
SURF1-203ENST00000463965 NDUFAF2Q8N183 169 aa26.35■■□□□ 1.81
SURF1-203ENST00000463965 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP26.35■■□□□ 1.81
SURF1-203ENST00000463965 SPOCK2Q92563 424 aa26.35■■□□□ 1.81
SURF1-203ENST00000463965 ALG3Q92685 438 aa26.35■■□□□ 1.81
SURF1-203ENST00000463965 HAUS1Q96CS2 278 aa26.35■■□□□ 1.81
SURF1-203ENST00000463965 KLHDC7BQ96G42 594 aa26.35■■□□□ 1.81
SURF1-203ENST00000463965 ALS2CR12Q96Q35 445 aa26.35■■□□□ 1.81
SURF1-203ENST00000463965 WRAP53Q9BUR4 548 aaKnown RBP26.35■■□□□ 1.81
SURF1-203ENST00000463965 LZTFL1Q9NQ48 299 aa26.35■■□□□ 1.81
SURF1-203ENST00000463965 GDF3Q9NR23 364 aa26.35■■□□□ 1.81
SURF1-203ENST00000463965 PHTF1Q9UMS5 762 aa26.35■■□□□ 1.81
SURF1-203ENST00000463965 PCDHB9Q9Y5E1 797 aa26.35■■□□□ 1.81
SURF1-203ENST00000463965 RAI2Q9Y5P3 530 aa26.35■■□□□ 1.81
SURF1-203ENST00000463965 HS3ST3A1Q9Y663 406 aa26.35■■□□□ 1.81
SURF1-203ENST00000463965 DMXL1Q9Y485 3027 aa26.35■■□□□ 1.81
SURF1-203ENST00000463965 PCDH15Q96QU1 1955 aa26.35■■□□□ 1.81
SURF1-203ENST00000463965 HACD1B0YJ81 288 aa26.34■■□□□ 1.81
SURF1-203ENST00000463965 PYGMP11217 842 aa26.34■■□□□ 1.81
SURF1-203ENST00000463965 ITIH2P19823 946 aa26.34■■□□□ 1.81
SURF1-203ENST00000463965 CTSKP43235 329 aa26.34■■□□□ 1.81
SURF1-203ENST00000463965 BNC1Q01954 994 aa26.34■■□□□ 1.81
SURF1-203ENST00000463965 DSC2Q02487 901 aa26.34■■□□□ 1.81
SURF1-203ENST00000463965 ADCY2Q08462 1091 aa26.34■■□□□ 1.81
SURF1-203ENST00000463965 TMEM145Q8NBT3 493 aa26.34■■□□□ 1.81
SURF1-203ENST00000463965 OR2I1PQ8NGU4 316 aa26.34■■□□□ 1.81
SURF1-203ENST00000463965 NSMCE3Q96MG7 304 aa26.34■■□□□ 1.81
SURF1-203ENST00000463965 LENG8Q96PV6 779 aaPredicted RBP26.34■■□□□ 1.81
SURF1-203ENST00000463965 FERMT1Q9BQL6 677 aa26.34■■□□□ 1.81
SURF1-203ENST00000463965 FZD3Q9NPG1 666 aa26.34■■□□□ 1.81
SURF1-203ENST00000463965 PACSIN2Q9UNF0 486 aaPredicted RBP26.34■■□□□ 1.81
SURF1-203ENST00000463965 WNT1P04628 370 aa26.33■■□□□ 1.81
SURF1-203ENST00000463965 MMP12P39900 470 aa26.33■■□□□ 1.81
SURF1-203ENST00000463965 TRAF2Q12933 501 aa26.33■■□□□ 1.81
SURF1-203ENST00000463965 ZBTB17Q13105 803 aa26.33■■□□□ 1.81
SURF1-203ENST00000463965 SLC14A1Q13336 389 aa26.33■■□□□ 1.81
SURF1-203ENST00000463965 PRKD1Q15139 912 aaPredicted RBP26.33■■□□□ 1.81
SURF1-203ENST00000463965 ZC3H18Q86VM9 953 aaKnown RBP26.33■■□□□ 1.81
SURF1-203ENST00000463965 DENND6BQ8NEG7 585 aa26.33■■□□□ 1.81
SURF1-203ENST00000463965 PLXNA2O75051 1894 aa26.33■■□□□ 1.81
SURF1-203ENST00000463965 ADAMTS9Q9P2N4 1935 aa26.33■■□□□ 1.81
SURF1-203ENST00000463965 CFAP69A5D8W1 941 aa26.32■■□□□ 1.8
SURF1-203ENST00000463965 GOLGA6L9A6NEM1 432 aa26.32■■□□□ 1.8
SURF1-203ENST00000463965 FPGTO14772 594 aa26.32■■□□□ 1.8
SURF1-203ENST00000463965 PGLSO95336 258 aa26.32■■□□□ 1.8
SURF1-203ENST00000463965 PRKCGP05129 697 aa26.32■■□□□ 1.8
SURF1-203ENST00000463965 XRCC4Q13426 336 aa26.32■■□□□ 1.8
SURF1-203ENST00000463965 FGL2Q14314 439 aa26.32■■□□□ 1.8
SURF1-203ENST00000463965 OXR1Q8N573 874 aa26.32■■□□□ 1.8
SURF1-203ENST00000463965 HES6Q96HZ4 224 aa26.32■■□□□ 1.8
SURF1-203ENST00000463965 AGAP3Q96P47 875 aa26.32■■□□□ 1.8
SURF1-203ENST00000463965 CA5BQ9Y2D0 317 aa26.32■■□□□ 1.8
SURF1-203ENST00000463965 PPP2R2CQ9Y2T4 447 aa26.32■■□□□ 1.8
SURF1-203ENST00000463965 ANKRD36A6QL64 1941 aa26.31■■□□□ 1.8
SURF1-203ENST00000463965 A6NNZ2 444 aa26.31■■□□□ 1.8
SURF1-203ENST00000463965 H7C0C1 242 aa26.31■■□□□ 1.8
SURF1-203ENST00000463965 DDX3YO15523 660 aaKnown RBP26.31■■□□□ 1.8
SURF1-203ENST00000463965 LZTS3O60299 673 aaPredicted RBP26.31■■□□□ 1.8
SURF1-203ENST00000463965 ZNF883P0CG24 379 aa26.31■■□□□ 1.8
SURF1-203ENST00000463965 CYP2A6P11509 494 aaPredicted RBP26.31■■□□□ 1.8
SURF1-203ENST00000463965 ATP5OP48047 213 aa26.31■■□□□ 1.8
SURF1-203ENST00000463965 LIG3P49916 1009 aa26.31■■□□□ 1.8
SURF1-203ENST00000463965 EPHB1P54762 984 aa26.31■■□□□ 1.8
SURF1-203ENST00000463965 NXPH1P58417 271 aa26.31■■□□□ 1.8
SURF1-203ENST00000463965 SUZ12Q15022 739 aaKnown RBP26.31■■□□□ 1.8
SURF1-203ENST00000463965 TEX44Q53QW1 395 aa26.31■■□□□ 1.8
SURF1-203ENST00000463965 USP45Q70EL2 814 aa26.31■■□□□ 1.8
SURF1-203ENST00000463965 DPPA4Q7L190 304 aa26.31■■□□□ 1.8
SURF1-203ENST00000463965 CNTD1Q8N815 330 aa26.31■■□□□ 1.8
SURF1-203ENST00000463965 ARRDC2Q8TBH0 407 aa26.31■■□□□ 1.8
SURF1-203ENST00000463965 DOCK9Q9BZ29 2069 aa26.3■■□□□ 1.8
SURF1-203ENST00000463965 ELFN1P0C7U0 828 aa26.3■■□□□ 1.8
SURF1-203ENST00000463965 THEGLP0DJG4 465 aa26.3■■□□□ 1.8
SURF1-203ENST00000463965 C6P13671 934 aa26.3■■□□□ 1.8
SURF1-203ENST00000463965 CLDN2P57739 230 aa26.3■■□□□ 1.8
SURF1-203ENST00000463965 NIPAL4Q0D2K0 466 aa26.3■■□□□ 1.8
SURF1-203ENST00000463965 ZNF211Q13398 564 aaPredicted RBP26.3■■□□□ 1.8
SURF1-203ENST00000463965 ZNF423Q2M1K9 1284 aa26.3■■□□□ 1.8
SURF1-203ENST00000463965 B4GALNT4Q76KP1 1039 aa26.3■■□□□ 1.8
SURF1-203ENST00000463965 DGLUCYQ7Z3D6 616 aa26.3■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms