RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 CNGA4Q8IV77 575 aa10.25□□□□□ -0.77
SF3A3-204ENST00000462258 BBS5Q8N3I7 341 aa10.25□□□□□ -0.77
SF3A3-204ENST00000462258 NSMCE1Q8WV22 266 aa10.25□□□□□ -0.77
SF3A3-204ENST00000462258 CENPTQ96BT3 561 aa10.25□□□□□ -0.77
SF3A3-204ENST00000462258 ECHDC3Q96DC8 303 aa10.25□□□□□ -0.77
SF3A3-204ENST00000462258 MGME1Q9BQP7 344 aa10.25□□□□□ -0.77
SF3A3-204ENST00000462258 MBNL1Q9NR56 388 aaKnown RBP10.25□□□□□ -0.77
SF3A3-204ENST00000462258 SPTLC3Q9NUV7 552 aa10.25□□□□□ -0.77
SF3A3-204ENST00000462258 NLGN3Q9NZ94 848 aa10.25□□□□□ -0.77
SF3A3-204ENST00000462258 APOBEC3BQ9UH17 382 aaKnown RBP10.25□□□□□ -0.77
SF3A3-204ENST00000462258 ZZEF1O43149 2961 aa10.25□□□□□ -0.77
SF3A3-204ENST00000462258 PKD1L2Q7Z442 2459 aa10.24□□□□□ -0.77
SF3A3-204ENST00000462258 GOLGA4Q13439 2230 aaKnown RBP10.24□□□□□ -0.77
SF3A3-204ENST00000462258 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.24□□□□□ -0.77
SF3A3-204ENST00000462258 TMEM110-MUSTN1A8MSY1 372 aa10.24□□□□□ -0.77
SF3A3-204ENST00000462258 TRAFD1O14545 582 aaPredicted RBP10.24□□□□□ -0.77
SF3A3-204ENST00000462258 TOR1BO14657 336 aa10.24□□□□□ -0.77
SF3A3-204ENST00000462258 LZTS3O60299 673 aaPredicted RBP10.24□□□□□ -0.77
SF3A3-204ENST00000462258 SOCS5O75159 536 aa10.24□□□□□ -0.77
SF3A3-204ENST00000462258 KRT37O76014 449 aa10.24□□□□□ -0.77
SF3A3-204ENST00000462258 NEBLO76041 1014 aa10.24□□□□□ -0.77
SF3A3-204ENST00000462258 PCCBP05166 539 aa10.24□□□□□ -0.77
SF3A3-204ENST00000462258 ELFN1P0C7U0 828 aa10.24□□□□□ -0.77
SF3A3-204ENST00000462258 GIMD1P0DJR0 217 aa10.24□□□□□ -0.77
SF3A3-204ENST00000462258 CDK4P11802 303 aa10.24□□□□□ -0.77
SF3A3-204ENST00000462258 JUNDP17535 347 aa10.24□□□□□ -0.77
SF3A3-204ENST00000462258 IL4RP24394 825 aa10.24□□□□□ -0.77
SF3A3-204ENST00000462258 ACP1P24666 158 aa10.24□□□□□ -0.77
SF3A3-204ENST00000462258 HNF1BP35680 557 aa10.24□□□□□ -0.77
SF3A3-204ENST00000462258 MMP13P45452 471 aa10.24□□□□□ -0.77
SF3A3-204ENST00000462258 LIG3P49916 1009 aa10.24□□□□□ -0.77
SF3A3-204ENST00000462258 ARSEP51690 589 aa10.24□□□□□ -0.77
SF3A3-204ENST00000462258 ADKP55263 362 aaKnown RBP10.24□□□□□ -0.77
SF3A3-204ENST00000462258 CLDN6P56747 220 aa10.24□□□□□ -0.77
SF3A3-204ENST00000462258 TAS2R40P59535 323 aa10.24□□□□□ -0.77
SF3A3-204ENST00000462258 YPEL5P62699 121 aa10.24□□□□□ -0.77
SF3A3-204ENST00000462258 SEMG2Q02383 582 aa10.24□□□□□ -0.77
SF3A3-204ENST00000462258 RALGDSQ12967 914 aa10.24□□□□□ -0.77
SF3A3-204ENST00000462258 EIF2B5Q13144 721 aaKnown RBP10.24□□□□□ -0.77
SF3A3-204ENST00000462258 ILKQ13418 452 aa10.24□□□□□ -0.77
SF3A3-204ENST00000462258 PTK2BQ14289 1009 aa10.24□□□□□ -0.77
SF3A3-204ENST00000462258 LRRC14Q15048 493 aa10.24□□□□□ -0.77
SF3A3-204ENST00000462258 HES3Q5TGS1 186 aa10.24□□□□□ -0.77
SF3A3-204ENST00000462258 DPPA4Q7L190 304 aa10.24□□□□□ -0.77
SF3A3-204ENST00000462258 TMPRSS12Q86WS5 348 aa10.24□□□□□ -0.77
SF3A3-204ENST00000462258 MARCH9Q86YJ5 346 aa10.24□□□□□ -0.77
SF3A3-204ENST00000462258 RBFAQ8N0V3 343 aa10.24□□□□□ -0.77
SF3A3-204ENST00000462258 CCDC42Q96M95 316 aa10.24□□□□□ -0.77
SF3A3-204ENST00000462258 NUDCD1Q96RS6 583 aa10.24□□□□□ -0.77
SF3A3-204ENST00000462258 CHP1Q99653 195 aa10.24□□□□□ -0.77
SF3A3-204ENST00000462258 DUSP23Q9BVJ7 150 aa10.24□□□□□ -0.77
SF3A3-204ENST00000462258 NHEJ1Q9H9Q4 299 aaPredicted RBP10.24□□□□□ -0.77
SF3A3-204ENST00000462258 SCUBE2Q9NQ36 999 aa10.24□□□□□ -0.77
SF3A3-204ENST00000462258 KLF15Q9UIH9 416 aa10.24□□□□□ -0.77
SF3A3-204ENST00000462258 ANKRD11Q6UB99 2663 aaPredicted RBP10.24□□□□□ -0.77
SF3A3-204ENST00000462258 COL27A1Q8IZC6 1860 aaPredicted RBP10.23□□□□□ -0.77
SF3A3-204ENST00000462258 LAMA5O15230 3695 aa10.23□□□□□ -0.77
SF3A3-204ENST00000462258 TTC24A2A3L6 582 aaPredicted RBP10.23□□□□□ -0.77
SF3A3-204ENST00000462258 NEMP2A6NFY4 417 aa10.23□□□□□ -0.77
SF3A3-204ENST00000462258 SCAMP1O15126 338 aa10.23□□□□□ -0.77
SF3A3-204ENST00000462258 AQP9O43315 295 aa10.23□□□□□ -0.77
SF3A3-204ENST00000462258 MAP3K6O95382 1288 aa10.23□□□□□ -0.77
SF3A3-204ENST00000462258 CPP00450 1065 aa10.23□□□□□ -0.77
SF3A3-204ENST00000462258 KRT7P08729 469 aa10.23□□□□□ -0.77
SF3A3-204ENST00000462258 CR2P20023 1033 aa10.23□□□□□ -0.77
SF3A3-204ENST00000462258 GARSP41250 739 aaKnown RBP10.23□□□□□ -0.77
SF3A3-204ENST00000462258 MAXP61244 160 aa10.23□□□□□ -0.77
SF3A3-204ENST00000462258 POLR2LP62875 67 aaKnown RBP10.23□□□□□ -0.77
SF3A3-204ENST00000462258 GALNT2Q10471 571 aa10.23□□□□□ -0.77
SF3A3-204ENST00000462258 MESDQ14696 234 aa10.23□□□□□ -0.77
SF3A3-204ENST00000462258 PAFAH1B3Q15102 231 aaKnown RBP10.23□□□□□ -0.77
SF3A3-204ENST00000462258 AGERQ15109 404 aa10.23□□□□□ -0.77
SF3A3-204ENST00000462258 PDK2Q15119 407 aa10.23□□□□□ -0.77
SF3A3-204ENST00000462258 WSCD2Q2TBF2 565 aa10.23□□□□□ -0.77
SF3A3-204ENST00000462258 ATP13A4Q4VNC1 1196 aa10.23□□□□□ -0.77
SF3A3-204ENST00000462258 ANKRD20A8PQ5CZ79 823 aa10.23□□□□□ -0.77
SF3A3-204ENST00000462258 RALGPS1Q5JS13 557 aa10.23□□□□□ -0.77
SF3A3-204ENST00000462258 ZFYVE27Q5T4F4 411 aa10.23□□□□□ -0.77
SF3A3-204ENST00000462258 MARC1Q5VT66 337 aa10.23□□□□□ -0.77
SF3A3-204ENST00000462258 SARM1Q6SZW1 724 aa10.23□□□□□ -0.77
SF3A3-204ENST00000462258 PROSER1Q86XN7 944 aa10.23□□□□□ -0.77
SF3A3-204ENST00000462258 MAP7D3Q8IWC1 876 aa10.23□□□□□ -0.77
SF3A3-204ENST00000462258 RHOT2Q8IXI1 618 aa10.23□□□□□ -0.77
SF3A3-204ENST00000462258 PHACTR4Q8IZ21 702 aa10.23□□□□□ -0.77
SF3A3-204ENST00000462258 PGBD5Q8N414 524 aa10.23□□□□□ -0.77
SF3A3-204ENST00000462258 KCTD6Q8NC69 237 aa10.23□□□□□ -0.77
SF3A3-204ENST00000462258 PCDH19Q8TAB3 1148 aa10.23□□□□□ -0.77
SF3A3-204ENST00000462258 MDM1Q8TC05 714 aa10.23□□□□□ -0.77
SF3A3-204ENST00000462258 LMX1AQ8TE12 382 aa10.23□□□□□ -0.77
SF3A3-204ENST00000462258 PDCD6IPQ8WUM4 868 aaKnown RBP10.23□□□□□ -0.77
SF3A3-204ENST00000462258 BTN2A2Q8WVV5 523 aa10.23□□□□□ -0.77
SF3A3-204ENST00000462258 RFFLQ8WZ73 363 aa10.23□□□□□ -0.77
SF3A3-204ENST00000462258 FAF2Q96CS3 445 aa10.23□□□□□ -0.77
SF3A3-204ENST00000462258 APOLD1Q96LR9 279 aa10.23□□□□□ -0.77
SF3A3-204ENST00000462258 NSMCE3Q96MG7 304 aa10.23□□□□□ -0.77
SF3A3-204ENST00000462258 LRRC61Q9BV99 259 aa10.23□□□□□ -0.77
SF3A3-204ENST00000462258 CCDC86Q9H6F5 360 aaKnown RBP10.23□□□□□ -0.77
SF3A3-204ENST00000462258 CFAP47Q6ZTR5 3102 aa10.23□□□□□ -0.77
SF3A3-204ENST00000462258 CELSR3Q9NYQ7 3312 aa10.23□□□□□ -0.77
SF3A3-204ENST00000462258 DMXL2Q8TDJ6 3036 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms