RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 USP17L7P0C7H9 530 aa18.56■□□□□ 0.56
HPS3-204ENST00000462030 PSMD5Q16401 504 aa18.56■□□□□ 0.56
HPS3-204ENST00000462030 NOTUMQ6P988 496 aa18.56■□□□□ 0.56
HPS3-204ENST00000462030 KDELC2Q7Z4H8 507 aa18.56■□□□□ 0.56
HPS3-204ENST00000462030 GPR180Q86V85 440 aa18.56■□□□□ 0.56
HPS3-204ENST00000462030 FUNDC1Q8IVP5 155 aa18.56■□□□□ 0.56
HPS3-204ENST00000462030 C2CD4AQ8NCU7 369 aaPredicted RBP18.56■□□□□ 0.56
HPS3-204ENST00000462030 PPHLN1Q8NEY8 458 aaKnown RBP18.56■□□□□ 0.56
HPS3-204ENST00000462030 PPTC7Q8NI37 304 aa18.56■□□□□ 0.56
HPS3-204ENST00000462030 FAR2Q96K12 515 aa18.56■□□□□ 0.56
HPS3-204ENST00000462030 PLEKHG4BQ96PX9 1271 aa18.56■□□□□ 0.56
HPS3-204ENST00000462030 COLEC11Q9BWP8 271 aa18.56■□□□□ 0.56
HPS3-204ENST00000462030 UPF3AQ9H1J1 476 aaKnown RBP18.56■□□□□ 0.56
HPS3-204ENST00000462030 ELP3Q9H9T3 547 aa18.56■□□□□ 0.56
HPS3-204ENST00000462030 AURKCQ9UQB9 309 aa18.56■□□□□ 0.56
HPS3-204ENST00000462030 MRPL42Q9Y6G3 142 aaKnown RBP18.56■□□□□ 0.56
HPS3-204ENST00000462030 ZNF236Q9UL36 1845 aa18.56■□□□□ 0.56
HPS3-204ENST00000462030 A0A0G2JLL6 359 aaPredicted RBP18.56■□□□□ 0.56
HPS3-204ENST00000462030 AP3B1O00203 1094 aa18.56■□□□□ 0.56
HPS3-204ENST00000462030 DFFAO00273 331 aa18.56■□□□□ 0.56
HPS3-204ENST00000462030 UBFD1O14562 309 aaKnown RBP18.56■□□□□ 0.56
HPS3-204ENST00000462030 SEC24DO94855 1032 aaPredicted RBP18.56■□□□□ 0.56
HPS3-204ENST00000462030 WARSP23381 471 aaKnown RBP18.56■□□□□ 0.56
HPS3-204ENST00000462030 CHRNA4P43681 627 aa18.56■□□□□ 0.56
HPS3-204ENST00000462030 POLD2P49005 469 aa18.56■□□□□ 0.56
HPS3-204ENST00000462030 LILRA4P59901 499 aa18.56■□□□□ 0.56
HPS3-204ENST00000462030 C16orf72Q14CZ0 275 aa18.56■□□□□ 0.56
HPS3-204ENST00000462030 SV2CQ496J9 727 aa18.56■□□□□ 0.56
HPS3-204ENST00000462030 PRRT2Q7Z6L0 340 aaPredicted RBP18.56■□□□□ 0.56
HPS3-204ENST00000462030 TRPC4APQ8TEL6 797 aa18.56■□□□□ 0.56
HPS3-204ENST00000462030 ATXN3LQ9H3M9 355 aa18.56■□□□□ 0.56
HPS3-204ENST00000462030 IL1RL2Q9HB29 575 aa18.56■□□□□ 0.56
HPS3-204ENST00000462030 TMEM30AQ9NV96 361 aa18.56■□□□□ 0.56
HPS3-204ENST00000462030 ARMC1Q9NVT9 282 aa18.56■□□□□ 0.56
HPS3-204ENST00000462030 FBXO5Q9UKT4 447 aa18.56■□□□□ 0.56
HPS3-204ENST00000462030 TCAF1Q9Y4C2 921 aa18.56■□□□□ 0.56
HPS3-204ENST00000462030 CACNG3O60359 315 aa18.55■□□□□ 0.56
HPS3-204ENST00000462030 TPST1O60507 370 aa18.55■□□□□ 0.56
HPS3-204ENST00000462030 DNAJB2P25686 324 aa18.55■□□□□ 0.56
HPS3-204ENST00000462030 ETFBP38117 255 aa18.55■□□□□ 0.56
HPS3-204ENST00000462030 ADCYAP1R1P41586 468 aa18.55■□□□□ 0.56
HPS3-204ENST00000462030 KPNA2P52292 529 aaKnown RBP18.55■□□□□ 0.56
HPS3-204ENST00000462030 NME5P56597 212 aa18.55■□□□□ 0.56
HPS3-204ENST00000462030 NUP107P57740 925 aa18.55■□□□□ 0.56
HPS3-204ENST00000462030 CCNA1P78396 465 aa18.55■□□□□ 0.56
HPS3-204ENST00000462030 ARL13BQ3SXY8 428 aa18.55■□□□□ 0.56
HPS3-204ENST00000462030 ANKDD1AQ495B1 522 aa18.55■□□□□ 0.56
HPS3-204ENST00000462030 KCTD21Q4G0X4 260 aa18.55■□□□□ 0.56
HPS3-204ENST00000462030 WSCD1Q658N2 575 aa18.55■□□□□ 0.56
HPS3-204ENST00000462030 TTC33Q6PID6 262 aaPredicted RBP18.55■□□□□ 0.56
HPS3-204ENST00000462030 AFAP1L2Q8N4X5 818 aa18.55■□□□□ 0.56
HPS3-204ENST00000462030 PLGRKTQ9HBL7 147 aa18.55■□□□□ 0.56
HPS3-204ENST00000462030 EML4Q9HC35 981 aaKnown RBP18.55■□□□□ 0.56
HPS3-204ENST00000462030 CSADQ9Y600 493 aa18.55■□□□□ 0.56
HPS3-204ENST00000462030 A0A087WXM4 84 aa18.55■□□□□ 0.56
HPS3-204ENST00000462030 SH3PXD2BA1X283 911 aa18.55■□□□□ 0.56
HPS3-204ENST00000462030 TRIM64CA6NLI5 447 aa18.55■□□□□ 0.56
HPS3-204ENST00000462030 NME4O00746 187 aa18.55■□□□□ 0.56
HPS3-204ENST00000462030 ALDOCP09972 364 aaKnown RBP18.55■□□□□ 0.56
HPS3-204ENST00000462030 PNPLA4P41247 253 aa18.55■□□□□ 0.56
HPS3-204ENST00000462030 PPIL2Q13356 520 aa18.55■□□□□ 0.56
HPS3-204ENST00000462030 SEPT6Q14141 434 aa18.55■□□□□ 0.56
HPS3-204ENST00000462030 MAP7D1Q3KQU3 841 aa18.55■□□□□ 0.56
HPS3-204ENST00000462030 ZBED5Q49AG3 693 aa18.55■□□□□ 0.56
HPS3-204ENST00000462030 TBCELQ5QJ74 424 aa18.55■□□□□ 0.56
HPS3-204ENST00000462030 KLHDC8BQ8IXV7 354 aa18.55■□□□□ 0.56
HPS3-204ENST00000462030 C3orf30Q96M34 536 aa18.55■□□□□ 0.56
HPS3-204ENST00000462030 MUC3BQ9H195 1237 aa18.55■□□□□ 0.56
HPS3-204ENST00000462030 WDCPQ9H6R7 721 aa18.55■□□□□ 0.56
HPS3-204ENST00000462030 VPS45Q9NRW7 570 aa18.55■□□□□ 0.56
HPS3-204ENST00000462030 AAR2Q9Y312 384 aaKnown RBP18.55■□□□□ 0.56
HPS3-204ENST00000462030 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.54■□□□□ 0.56
HPS3-204ENST00000462030 CLIC3O95833 236 aa18.54■□□□□ 0.56
HPS3-204ENST00000462030 ESRRGP62508 458 aa18.54■□□□□ 0.56
HPS3-204ENST00000462030 YBX1P67809 324 aaKnown RBP18.54■□□□□ 0.56
HPS3-204ENST00000462030 POU4F1Q01851 419 aa18.54■□□□□ 0.56
HPS3-204ENST00000462030 FAM83EQ2M2I3 478 aa18.54■□□□□ 0.56
HPS3-204ENST00000462030 HACD2Q6Y1H2 254 aa18.54■□□□□ 0.56
HPS3-204ENST00000462030 SMYD1Q8NB12 490 aa18.54■□□□□ 0.56
HPS3-204ENST00000462030 SHCBP1Q8NEM2 672 aa18.54■□□□□ 0.56
HPS3-204ENST00000462030 SMOQ99835 787 aa18.54■□□□□ 0.56
HPS3-204ENST00000462030 ADI1Q9BV57 179 aa18.54■□□□□ 0.56
HPS3-204ENST00000462030 GSTO2Q9H4Y5 243 aa18.54■□□□□ 0.56
HPS3-204ENST00000462030 CRTAC1Q9NQ79 661 aa18.54■□□□□ 0.56
HPS3-204ENST00000462030 FAIMQ9NVQ4 179 aa18.54■□□□□ 0.56
HPS3-204ENST00000462030 ARHGEF38Q9NXL2 777 aa18.54■□□□□ 0.56
HPS3-204ENST00000462030 CACNG4Q9UBN1 327 aa18.54■□□□□ 0.56
HPS3-204ENST00000462030 EGFL7Q9UHF1 273 aa18.54■□□□□ 0.56
HPS3-204ENST00000462030 ZNHIT2Q9UHR6 403 aa18.54■□□□□ 0.56
HPS3-204ENST00000462030 TRAF6Q9Y4K3 522 aa18.54■□□□□ 0.56
HPS3-204ENST00000462030 PPP2R3BQ9Y5P8 575 aa18.54■□□□□ 0.56
HPS3-204ENST00000462030 PSMD3O43242 534 aa18.54■□□□□ 0.56
HPS3-204ENST00000462030 STAMBPO95630 424 aa18.54■□□□□ 0.56
HPS3-204ENST00000462030 HSPA8P11142 646 aaKnown RBP18.54■□□□□ 0.56
HPS3-204ENST00000462030 NOMO2Q5JPE7 1267 aa18.54■□□□□ 0.56
HPS3-204ENST00000462030 Q6ZNX1 250 aa18.54■□□□□ 0.56
HPS3-204ENST00000462030 LARP4Q71RC2 724 aaKnown RBP eCLIP18.54■□□□□ 0.56
HPS3-204ENST00000462030 SPPL2CQ8IUH8 684 aa18.54■□□□□ 0.56
HPS3-204ENST00000462030 CROCCP3Q8IVE0 287 aa18.54■□□□□ 0.56
HPS3-204ENST00000462030 TREX1Q9NSU2 369 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms