RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 NEBLO76041 1014 aa9.23□□□□□ -0.93
BRCA1-207ENST00000461798 PIGNO95427 931 aa9.23□□□□□ -0.93
BRCA1-207ENST00000461798 PEX11BO96011 259 aa9.23□□□□□ -0.93
BRCA1-207ENST00000461798 SERPING1P05155 500 aa9.23□□□□□ -0.93
BRCA1-207ENST00000461798 CYP1A2P05177 515 aa9.23□□□□□ -0.93
BRCA1-207ENST00000461798 XPAP23025 273 aaPredicted RBP9.23□□□□□ -0.93
BRCA1-207ENST00000461798 SERPINA4P29622 427 aa9.23□□□□□ -0.93
BRCA1-207ENST00000461798 HSPA9P38646 679 aaKnown RBP9.23□□□□□ -0.93
BRCA1-207ENST00000461798 EIF4A3P38919 411 aaKnown RBP9.23□□□□□ -0.93
BRCA1-207ENST00000461798 MMP12P39900 470 aa9.23□□□□□ -0.93
BRCA1-207ENST00000461798 RENBPP51606 427 aa9.23□□□□□ -0.93
BRCA1-207ENST00000461798 THOP1P52888 689 aa9.23□□□□□ -0.93
BRCA1-207ENST00000461798 UBASH3AP57075 661 aa9.23□□□□□ -0.93
BRCA1-207ENST00000461798 AP1S1P61966 158 aa9.23□□□□□ -0.93
BRCA1-207ENST00000461798 POLR2LP62875 67 aaKnown RBP9.23□□□□□ -0.93
BRCA1-207ENST00000461798 LRRC14Q15048 493 aa9.23□□□□□ -0.93
BRCA1-207ENST00000461798 WSCD2Q2TBF2 565 aa9.23□□□□□ -0.93
BRCA1-207ENST00000461798 PPP6R3Q5H9R7 873 aaPredicted RBP9.23□□□□□ -0.93
BRCA1-207ENST00000461798 LRRC73Q5JTD7 316 aa9.23□□□□□ -0.93
BRCA1-207ENST00000461798 ERAP2Q6P179 960 aa9.23□□□□□ -0.93
BRCA1-207ENST00000461798 MACC1Q6ZN28 852 aa9.23□□□□□ -0.93
BRCA1-207ENST00000461798 POLNQ7Z5Q5 900 aa9.23□□□□□ -0.93
BRCA1-207ENST00000461798 LUZP1Q86V48 1076 aa9.23□□□□□ -0.93
BRCA1-207ENST00000461798 VPS36Q86VN1 386 aa9.23□□□□□ -0.93
BRCA1-207ENST00000461798 ZSWIM9Q86XI8 627 aa9.23□□□□□ -0.93
BRCA1-207ENST00000461798 CAMK1DQ8IU85 385 aa9.23□□□□□ -0.93
BRCA1-207ENST00000461798 SDR16C5Q8N3Y7 309 aa9.23□□□□□ -0.93
BRCA1-207ENST00000461798 NPWQ8N729 165 aa9.23□□□□□ -0.93
BRCA1-207ENST00000461798 TPCN2Q8NHX9 752 aa9.23□□□□□ -0.93
BRCA1-207ENST00000461798 FAM71BQ8TC56 605 aa9.23□□□□□ -0.93
BRCA1-207ENST00000461798 TEKT4Q8WW24 435 aa9.23□□□□□ -0.93
BRCA1-207ENST00000461798 WRAP53Q9BUR4 548 aaKnown RBP9.23□□□□□ -0.93
BRCA1-207ENST00000461798 BOCQ9BWV1 1114 aa9.23□□□□□ -0.93
BRCA1-207ENST00000461798 ATP13A3Q9H7F0 1226 aa9.23□□□□□ -0.93
BRCA1-207ENST00000461798 ZWILCHQ9H900 591 aa9.23□□□□□ -0.93
BRCA1-207ENST00000461798 MYO1AQ9UBC5 1043 aa9.23□□□□□ -0.93
BRCA1-207ENST00000461798 SEPT3Q9UH03 358 aa9.23□□□□□ -0.93
BRCA1-207ENST00000461798 RALYQ9UKM9 306 aaKnown RBP9.23□□□□□ -0.93
BRCA1-207ENST00000461798 PNMA8BQ9ULN7 279 aaPredicted RBP9.23□□□□□ -0.93
BRCA1-207ENST00000461798 ATP8A1Q9Y2Q0 1164 aa9.23□□□□□ -0.93
BRCA1-207ENST00000461798 CACNA1GO43497 2377 aa9.23□□□□□ -0.93
BRCA1-207ENST00000461798 DSPP15924 2871 aaKnown RBP9.22□□□□□ -0.93
BRCA1-207ENST00000461798 A0A087X0T9 212 aa9.22□□□□□ -0.93
BRCA1-207ENST00000461798 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.22□□□□□ -0.93
BRCA1-207ENST00000461798 A0A1W2PQ67 120 aa9.22□□□□□ -0.93
BRCA1-207ENST00000461798 EME2A4GXA9 379 aaPredicted RBP9.22□□□□□ -0.93
BRCA1-207ENST00000461798 DFFAO00273 331 aa9.22□□□□□ -0.93
BRCA1-207ENST00000461798 MUSKO15146 869 aa9.22□□□□□ -0.93
BRCA1-207ENST00000461798 GCATO75600 419 aa9.22□□□□□ -0.93
BRCA1-207ENST00000461798 HOXC4P09017 264 aaPredicted RBP9.22□□□□□ -0.93
BRCA1-207ENST00000461798 FAM228BP0C875 321 aa9.22□□□□□ -0.93
BRCA1-207ENST00000461798 RARAP10276 462 aa9.22□□□□□ -0.93
BRCA1-207ENST00000461798 C6P13671 934 aa9.22□□□□□ -0.93
BRCA1-207ENST00000461798 CR2P20023 1033 aa9.22□□□□□ -0.93
BRCA1-207ENST00000461798 AMPD1P23109 780 aa9.22□□□□□ -0.93
BRCA1-207ENST00000461798 IL4RP24394 825 aa9.22□□□□□ -0.93
BRCA1-207ENST00000461798 HNRNPH3P31942 346 aaKnown RBP9.22□□□□□ -0.93
BRCA1-207ENST00000461798 ARL4AP40617 200 aa9.22□□□□□ -0.93
BRCA1-207ENST00000461798 LIG3P49916 1009 aa9.22□□□□□ -0.93
BRCA1-207ENST00000461798 BLKP51451 505 aa9.22□□□□□ -0.93
BRCA1-207ENST00000461798 PPARDQ03181 441 aa9.22□□□□□ -0.93
BRCA1-207ENST00000461798 BCL2L1Q07817 233 aa9.22□□□□□ -0.93
BRCA1-207ENST00000461798 SLC10A7Q0GE19 358 aa9.22□□□□□ -0.93
BRCA1-207ENST00000461798 DSG2Q14126 1118 aa9.22□□□□□ -0.93
BRCA1-207ENST00000461798 LBRQ14739 615 aaKnown RBP9.22□□□□□ -0.93
BRCA1-207ENST00000461798 IRF4Q15306 451 aa9.22□□□□□ -0.93
BRCA1-207ENST00000461798 COL28A1Q2UY09 1125 aa9.22□□□□□ -0.93
BRCA1-207ENST00000461798 RALGPS1Q5JS13 557 aa9.22□□□□□ -0.93
BRCA1-207ENST00000461798 LVRNQ6Q4G3 990 aa9.22□□□□□ -0.93
BRCA1-207ENST00000461798 C19orf48Q6RUI8 117 aa9.22□□□□□ -0.93
BRCA1-207ENST00000461798 KDM7AQ6ZMT4 941 aa9.22□□□□□ -0.93
BRCA1-207ENST00000461798 ARHGAP36Q6ZRI8 547 aa9.22□□□□□ -0.93
BRCA1-207ENST00000461798 LRRC49Q8IUZ0 686 aa9.22□□□□□ -0.93
BRCA1-207ENST00000461798 TP53INP2Q8IXH6 220 aa9.22□□□□□ -0.93
BRCA1-207ENST00000461798 PHACTR4Q8IZ21 702 aa9.22□□□□□ -0.93
BRCA1-207ENST00000461798 CBARPQ8N350 705 aaPredicted RBP9.22□□□□□ -0.93
BRCA1-207ENST00000461798 FSTL5Q8N475 847 aaPredicted RBP9.22□□□□□ -0.93
BRCA1-207ENST00000461798 LMX1AQ8TE12 382 aa9.22□□□□□ -0.93
BRCA1-207ENST00000461798 GRAMD1AQ96CP6 724 aa9.22□□□□□ -0.93
BRCA1-207ENST00000461798 NSMCE3Q96MG7 304 aa9.22□□□□□ -0.93
BRCA1-207ENST00000461798 CSPG4P5Q96PW8 444 aa9.22□□□□□ -0.93
BRCA1-207ENST00000461798 IL12RB2Q99665 862 aa9.22□□□□□ -0.93
BRCA1-207ENST00000461798 APOOQ9BUR5 198 aa9.22□□□□□ -0.93
BRCA1-207ENST00000461798 LRRC61Q9BV99 259 aa9.22□□□□□ -0.93
BRCA1-207ENST00000461798 CINPQ9BW66 212 aaPredicted RBP9.22□□□□□ -0.93
BRCA1-207ENST00000461798 SLC13A1Q9BZW2 595 aa9.22□□□□□ -0.93
BRCA1-207ENST00000461798 TCEAL2Q9H3H9 227 aaPredicted RBP9.22□□□□□ -0.93
BRCA1-207ENST00000461798 SP110Q9HB58 689 aa9.22□□□□□ -0.93
BRCA1-207ENST00000461798 RCOR3Q9P2K3 495 aaPredicted RBP9.22□□□□□ -0.93
BRCA1-207ENST00000461798 IP6K2Q9UHH9 426 aa9.22□□□□□ -0.93
BRCA1-207ENST00000461798 NENFQ9UMX5 172 aa9.22□□□□□ -0.93
BRCA1-207ENST00000461798 LUC7L2Q9Y383 392 aaKnown RBP9.22□□□□□ -0.93
BRCA1-207ENST00000461798 FREM2Q5SZK8 3169 aa9.22□□□□□ -0.93
BRCA1-207ENST00000461798 TP53BP1Q12888 1972 aaPredicted RBP9.21□□□□□ -0.93
BRCA1-207ENST00000461798 YY2O15391 372 aa9.21□□□□□ -0.94
BRCA1-207ENST00000461798 HTRA2O43464 458 aaPredicted RBP9.21□□□□□ -0.94
BRCA1-207ENST00000461798 MAFKO60675 156 aa9.21□□□□□ -0.94
BRCA1-207ENST00000461798 SOCS5O75159 536 aa9.21□□□□□ -0.94
BRCA1-207ENST00000461798 DXOO77932 396 aaKnown RBP9.21□□□□□ -0.94
BRCA1-207ENST00000461798 MYF5P13349 255 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms