RNA–Protein interactions for RNA: ENST00000460428.5

SFPQ-202, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-202ENST00000460428 TMEM216Q9P0N5 145 aa8.1□□□□□ -1.11
SFPQ-202ENST00000460428 PCDH10Q9P2E7 1040 aa8.1□□□□□ -1.11
SFPQ-202ENST00000460428 COPG2Q9UBF2 871 aa8.1□□□□□ -1.11
SFPQ-202ENST00000460428 GGT7Q9UJ14 662 aa8.1□□□□□ -1.11
SFPQ-202ENST00000460428 MID2Q9UJV3 735 aa8.1□□□□□ -1.11
SFPQ-202ENST00000460428 VPS28Q9UK41 221 aa8.1□□□□□ -1.11
SFPQ-202ENST00000460428 FBXO10Q9UK96 956 aa8.1□□□□□ -1.11
SFPQ-202ENST00000460428 INTS6Q9UL03 887 aaKnown RBP8.1□□□□□ -1.11
SFPQ-202ENST00000460428 HS3ST2Q9Y278 367 aa8.1□□□□□ -1.11
SFPQ-202ENST00000460428 PPIL1Q9Y3C6 166 aa8.1□□□□□ -1.11
SFPQ-202ENST00000460428 RAI2Q9Y5P3 530 aa8.1□□□□□ -1.11
SFPQ-202ENST00000460428 ACTL7AQ9Y615 435 aa8.1□□□□□ -1.11
SFPQ-202ENST00000460428 FAM95CA0A1B0GW59 222 aa8.09□□□□□ -1.11
SFPQ-202ENST00000460428 TTC24A2A3L6 582 aaPredicted RBP8.09□□□□□ -1.11
SFPQ-202ENST00000460428 TARM1B6A8C7 271 aa8.09□□□□□ -1.11
SFPQ-202ENST00000460428 GOLGA8TH3BQL2 631 aa8.09□□□□□ -1.11
SFPQ-202ENST00000460428 SLC9A3R1O14745 358 aaPredicted RBP8.09□□□□□ -1.11
SFPQ-202ENST00000460428 GJB3O75712 270 aa8.09□□□□□ -1.11
SFPQ-202ENST00000460428 RPP40O75818 363 aaKnown RBP8.09□□□□□ -1.11
SFPQ-202ENST00000460428 HAUS5O94927 633 aa8.09□□□□□ -1.11
SFPQ-202ENST00000460428 PGLSO95336 258 aa8.09□□□□□ -1.11
SFPQ-202ENST00000460428 ATP5BP06576 529 aaKnown RBP8.09□□□□□ -1.11
SFPQ-202ENST00000460428 SLC35E2BP0CK96 405 aa8.09□□□□□ -1.11
SFPQ-202ENST00000460428 GJA1P17302 382 aa8.09□□□□□ -1.11
SFPQ-202ENST00000460428 BGNP21810 368 aa8.09□□□□□ -1.11
SFPQ-202ENST00000460428 GRK2P25098 689 aa8.09□□□□□ -1.11
SFPQ-202ENST00000460428 CA8P35219 290 aa8.09□□□□□ -1.11
SFPQ-202ENST00000460428 AVPR1AP37288 418 aa8.09□□□□□ -1.11
SFPQ-202ENST00000460428 SLC1A2P43004 574 aa8.09□□□□□ -1.11
SFPQ-202ENST00000460428 GRIA4P48058 902 aa8.09□□□□□ -1.11
SFPQ-202ENST00000460428 SUOXP51687 545 aa8.09□□□□□ -1.11
SFPQ-202ENST00000460428 ARSDP51689 593 aa8.09□□□□□ -1.11
SFPQ-202ENST00000460428 CORO7P57737 925 aa8.09□□□□□ -1.11
SFPQ-202ENST00000460428 RAB10P61026 200 aa8.09□□□□□ -1.11
SFPQ-202ENST00000460428 MPP1Q00013 466 aa8.09□□□□□ -1.11
SFPQ-202ENST00000460428 OCRLQ01968 901 aa8.09□□□□□ -1.11
SFPQ-202ENST00000460428 SULT2A1Q06520 285 aa8.09□□□□□ -1.11
SFPQ-202ENST00000460428 TRAF2Q12933 501 aa8.09□□□□□ -1.11
SFPQ-202ENST00000460428 IFT88Q13099 833 aa8.09□□□□□ -1.11
SFPQ-202ENST00000460428 CTBP1Q13363 440 aa8.09□□□□□ -1.11
SFPQ-202ENST00000460428 SLC5A9Q2M3M2 681 aa8.09□□□□□ -1.11
SFPQ-202ENST00000460428 TSNAXIP1Q2TAA8 658 aa8.09□□□□□ -1.11
SFPQ-202ENST00000460428 C9orf50Q5SZB4 431 aa8.09□□□□□ -1.11
SFPQ-202ENST00000460428 MBLAC2Q68D91 279 aa8.09□□□□□ -1.11
SFPQ-202ENST00000460428 TMEM184AQ6ZMB5 413 aa8.09□□□□□ -1.11
SFPQ-202ENST00000460428 TRPM8Q7Z2W7 1104 aa8.09□□□□□ -1.11
SFPQ-202ENST00000460428 SPRED2Q7Z698 418 aa8.09□□□□□ -1.11
SFPQ-202ENST00000460428 CMC1Q7Z7K0 106 aa8.09□□□□□ -1.11
SFPQ-202ENST00000460428 NUDCD3Q8IVD9 361 aa8.09□□□□□ -1.11
SFPQ-202ENST00000460428 ADGRG2Q8IZP9 1017 aa8.09□□□□□ -1.11
SFPQ-202ENST00000460428 APCDD1Q8J025 514 aa8.09□□□□□ -1.11
SFPQ-202ENST00000460428 PLD6Q8N2A8 252 aaKnown RBP8.09□□□□□ -1.11
SFPQ-202ENST00000460428 PIAS4Q8N2W9 510 aaPredicted RBP8.09□□□□□ -1.11
SFPQ-202ENST00000460428 TTC30BQ8N4P2 665 aa8.09□□□□□ -1.11
SFPQ-202ENST00000460428 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.09□□□□□ -1.11
SFPQ-202ENST00000460428 GBP7Q8N8V2 638 aaPredicted RBP8.09□□□□□ -1.11
SFPQ-202ENST00000460428 MDGA1Q8NFP4 955 aa8.09□□□□□ -1.11
SFPQ-202ENST00000460428 RIN3Q8TB24 985 aa8.09□□□□□ -1.11
SFPQ-202ENST00000460428 C10orf82Q8WW14 230 aa8.09□□□□□ -1.11
SFPQ-202ENST00000460428 HDAC10Q969S8 669 aa8.09□□□□□ -1.11
SFPQ-202ENST00000460428 UBXN10Q96LJ8 280 aa8.09□□□□□ -1.11
SFPQ-202ENST00000460428 TBATAQ96M53 351 aa8.09□□□□□ -1.11
SFPQ-202ENST00000460428 GPR78Q96P69 363 aa8.09□□□□□ -1.11
SFPQ-202ENST00000460428 LYSMD1Q96S90 227 aa8.09□□□□□ -1.11
SFPQ-202ENST00000460428 TCF12Q99081 682 aa8.09□□□□□ -1.11
SFPQ-202ENST00000460428 CDCA3Q99618 268 aaPredicted RBP8.09□□□□□ -1.11
SFPQ-202ENST00000460428 SIKE1Q9BRV8 207 aa8.09□□□□□ -1.11
SFPQ-202ENST00000460428 TSSK1BQ9BXA7 367 aa8.09□□□□□ -1.11
SFPQ-202ENST00000460428 CPEB1Q9BZB8 566 aaKnown RBP8.09□□□□□ -1.11
SFPQ-202ENST00000460428 POPDC3Q9HBV1 291 aa8.09□□□□□ -1.11
SFPQ-202ENST00000460428 INTS10Q9NVR2 710 aaKnown RBP8.09□□□□□ -1.11
SFPQ-202ENST00000460428 THAP1Q9NVV9 213 aa8.09□□□□□ -1.11
SFPQ-202ENST00000460428 PRDM4Q9UKN5 801 aa8.09□□□□□ -1.11
SFPQ-202ENST00000460428 CLEC4EQ9ULY5 219 aa8.09□□□□□ -1.11
SFPQ-202ENST00000460428 CCL26Q9Y258 94 aa8.09□□□□□ -1.11
SFPQ-202ENST00000460428 HCFC2Q9Y5Z7 792 aa8.09□□□□□ -1.11
SFPQ-202ENST00000460428 USH1CQ9Y6N9 552 aa8.09□□□□□ -1.11
SFPQ-202ENST00000460428 A0A087X1B8 175 aa8.08□□□□□ -1.12
SFPQ-202ENST00000460428 CCDC195A0A1B0GUA6 201 aa8.08□□□□□ -1.12
SFPQ-202ENST00000460428 A0A1W2PQ67 120 aa8.08□□□□□ -1.12
SFPQ-202ENST00000460428 C2orf81A6NN90 581 aa8.08□□□□□ -1.12
SFPQ-202ENST00000460428 WASH3PC4AMC7 463 aa8.08□□□□□ -1.12
SFPQ-202ENST00000460428 G3V2L1 256 aa8.08□□□□□ -1.12
SFPQ-202ENST00000460428 H2AFYO75367 372 aaKnown RBP8.08□□□□□ -1.12
SFPQ-202ENST00000460428 KLHL2O95198 593 aa8.08□□□□□ -1.12
SFPQ-202ENST00000460428 GLP2RO95838 553 aa8.08□□□□□ -1.12
SFPQ-202ENST00000460428 MT-CO1P00395 513 aa8.08□□□□□ -1.12
SFPQ-202ENST00000460428 CA3P07451 260 aa8.08□□□□□ -1.12
SFPQ-202ENST00000460428 PDHA1P08559 390 aa8.08□□□□□ -1.12
SFPQ-202ENST00000460428 DLDP09622 509 aaKnown RBP8.08□□□□□ -1.12
SFPQ-202ENST00000460428 SBK3P0C264 359 aa8.08□□□□□ -1.12
SFPQ-202ENST00000460428 FGF3P11487 239 aaPredicted RBP8.08□□□□□ -1.12
SFPQ-202ENST00000460428 MYOGP15173 224 aa8.08□□□□□ -1.12
SFPQ-202ENST00000460428 STMN1P16949 149 aa8.08□□□□□ -1.12
SFPQ-202ENST00000460428 LPOP22079 712 aaPredicted RBP8.08□□□□□ -1.12
SFPQ-202ENST00000460428 HLA-FP30511 346 aa8.08□□□□□ -1.12
SFPQ-202ENST00000460428 ALDH3A1P30838 453 aa8.08□□□□□ -1.12
SFPQ-202ENST00000460428 CD70P32970 193 aa8.08□□□□□ -1.12
SFPQ-202ENST00000460428 HMGCLP35914 325 aa8.08□□□□□ -1.12
SFPQ-202ENST00000460428 PTPN5P54829 565 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms