RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 ZNF236Q9UL36 1845 aa18.25■□□□□ 0.51
HPS3-202ENST00000460120 A0A087X1B8 175 aa18.24■□□□□ 0.51
HPS3-202ENST00000460120 ADAMTS4O75173 837 aa18.24■□□□□ 0.51
HPS3-202ENST00000460120 ZNF33AQ06730 810 aa18.24■□□□□ 0.51
HPS3-202ENST00000460120 RALGDSQ12967 914 aa18.24■□□□□ 0.51
HPS3-202ENST00000460120 IRF5Q13568 498 aa18.24■□□□□ 0.51
HPS3-202ENST00000460120 GEN1Q17RS7 908 aa18.24■□□□□ 0.51
HPS3-202ENST00000460120 MGAT5BQ3V5L5 792 aa18.24■□□□□ 0.51
HPS3-202ENST00000460120 CTXN3Q4LDR2 81 aa18.24■□□□□ 0.51
HPS3-202ENST00000460120 TECRLQ5HYJ1 363 aa18.24■□□□□ 0.51
HPS3-202ENST00000460120 CUZD1Q86UP6 607 aa18.24■□□□□ 0.51
HPS3-202ENST00000460120 PPP2R3CQ969Q6 453 aa18.24■□□□□ 0.51
HPS3-202ENST00000460120 IMP4Q96G21 291 aaKnown RBP18.24■□□□□ 0.51
HPS3-202ENST00000460120 EXOC2Q96KP1 924 aa18.24■□□□□ 0.51
HPS3-202ENST00000460120 SMIM14Q96QK8 99 aa18.24■□□□□ 0.51
HPS3-202ENST00000460120 SEMA3CQ99985 751 aa18.24■□□□□ 0.51
HPS3-202ENST00000460120 FBRSL1Q9HCM7 1045 aaKnown RBP18.24■□□□□ 0.51
HPS3-202ENST00000460120 VTI1BQ9UEU0 232 aa18.24■□□□□ 0.51
HPS3-202ENST00000460120 STK39Q9UEW8 545 aa18.24■□□□□ 0.51
HPS3-202ENST00000460120 PCDHB8Q9UN66 801 aa18.24■□□□□ 0.51
HPS3-202ENST00000460120 LAMA2P24043 3122 aaKnown RBP18.24■□□□□ 0.51
HPS3-202ENST00000460120 SEPT4O43236 478 aa18.24■□□□□ 0.51
HPS3-202ENST00000460120 MMP2P08253 660 aa18.24■□□□□ 0.51
HPS3-202ENST00000460120 COL6A2P12110 1019 aa18.24■□□□□ 0.51
HPS3-202ENST00000460120 DNAJB2P25686 324 aa18.24■□□□□ 0.51
HPS3-202ENST00000460120 ALDH1A3P47895 512 aa18.24■□□□□ 0.51
HPS3-202ENST00000460120 CAP1Q01518 475 aa18.24■□□□□ 0.51
HPS3-202ENST00000460120 MON1AQ86VX9 555 aa18.24■□□□□ 0.51
HPS3-202ENST00000460120 GALNT4Q8N4A0 578 aa18.24■□□□□ 0.51
HPS3-202ENST00000460120 SLC45A3Q96JT2 553 aa18.24■□□□□ 0.51
HPS3-202ENST00000460120 FAM193BQ96PV7 902 aaPredicted RBP18.24■□□□□ 0.51
HPS3-202ENST00000460120 PCDHAC1Q9H158 963 aa18.24■□□□□ 0.51
HPS3-202ENST00000460120 TLR6Q9Y2C9 796 aa18.24■□□□□ 0.51
HPS3-202ENST00000460120 TRPM7Q96QT4 1865 aa18.23■□□□□ 0.51
HPS3-202ENST00000460120 PPP6CO00743 305 aa18.23■□□□□ 0.51
HPS3-202ENST00000460120 LTA4HP09960 611 aaKnown RBP18.23■□□□□ 0.51
HPS3-202ENST00000460120 OR1E1P30953 314 aa18.23■□□□□ 0.51
HPS3-202ENST00000460120 TAF10Q12962 218 aa18.23■□□□□ 0.51
HPS3-202ENST00000460120 MED21Q13503 144 aa18.23■□□□□ 0.51
HPS3-202ENST00000460120 POLD3Q15054 466 aaPredicted RBP18.23■□□□□ 0.51
HPS3-202ENST00000460120 ZNF423Q2M1K9 1284 aa18.23■□□□□ 0.51
HPS3-202ENST00000460120 AGKQ53H12 422 aa18.23■□□□□ 0.51
HPS3-202ENST00000460120 VARS2Q5ST30 1063 aaKnown RBP18.23■□□□□ 0.51
HPS3-202ENST00000460120 AGAP9Q5VTM2 703 aa18.23■□□□□ 0.51
HPS3-202ENST00000460120 FAM171A1Q5VUB5 890 aa18.23■□□□□ 0.51
HPS3-202ENST00000460120 FBXL19Q6PCT2 694 aa18.23■□□□□ 0.51
HPS3-202ENST00000460120 SPDYE1Q8NFV5 336 aaPredicted RBP18.23■□□□□ 0.51
HPS3-202ENST00000460120 OR13C4Q8NGS5 318 aa18.23■□□□□ 0.51
HPS3-202ENST00000460120 DNAJC1Q96KC8 554 aaKnown RBP18.23■□□□□ 0.51
HPS3-202ENST00000460120 SERPINI1Q99574 410 aa18.23■□□□□ 0.51
HPS3-202ENST00000460120 DTNAQ9Y4J8 743 aa18.23■□□□□ 0.51
HPS3-202ENST00000460120 MUSKO15146 869 aa18.23■□□□□ 0.51
HPS3-202ENST00000460120 PRKAR2AP13861 404 aaKnown RBP18.23■□□□□ 0.51
HPS3-202ENST00000460120 PDAP1Q13442 181 aaKnown RBP18.23■□□□□ 0.51
HPS3-202ENST00000460120 AFMIDQ63HM1 303 aa18.23■□□□□ 0.51
HPS3-202ENST00000460120 RGMBQ6NW40 437 aa18.23■□□□□ 0.51
HPS3-202ENST00000460120 KLC3Q6P597 504 aa18.23■□□□□ 0.51
HPS3-202ENST00000460120 CILP2Q8IUL8 1156 aa18.23■□□□□ 0.51
HPS3-202ENST00000460120 SLC39A3Q9BRY0 314 aa18.23■□□□□ 0.51
HPS3-202ENST00000460120 CCSER2Q9H7U1 834 aa18.23■□□□□ 0.51
HPS3-202ENST00000460120 RGS18Q9NS28 235 aa18.23■□□□□ 0.51
HPS3-202ENST00000460120 MARCH2Q9P0N8 246 aa18.23■□□□□ 0.51
HPS3-202ENST00000460120 VWA7Q9Y334 891 aa18.23■□□□□ 0.51
HPS3-202ENST00000460120 TCAF2A6NFQ2 919 aa18.22■□□□□ 0.51
HPS3-202ENST00000460120 SCAMP3O14828 347 aaKnown RBP18.22■□□□□ 0.51
HPS3-202ENST00000460120 IPO13O94829 963 aaKnown RBP18.22■□□□□ 0.51
HPS3-202ENST00000460120 SIX3O95343 332 aaPredicted RBP18.22■□□□□ 0.51
HPS3-202ENST00000460120 VCLP18206 1134 aa18.22■□□□□ 0.51
HPS3-202ENST00000460120 HNRNPDQ14103 355 aaKnown RBP18.22■□□□□ 0.51
HPS3-202ENST00000460120 PITRM1Q5JRX3 1037 aa18.22■□□□□ 0.51
HPS3-202ENST00000460120 RASIP1Q5U651 963 aa18.22■□□□□ 0.51
HPS3-202ENST00000460120 PIWIL4Q7Z3Z4 852 aaKnown RBP18.22■□□□□ 0.51
HPS3-202ENST00000460120 ICA1LQ8NDH6 482 aa18.22■□□□□ 0.51
HPS3-202ENST00000460120 IFT43Q96FT9 208 aa18.22■□□□□ 0.51
HPS3-202ENST00000460120 CNDP1Q96KN2 507 aa18.22■□□□□ 0.51
HPS3-202ENST00000460120 LRGUKQ96M69 825 aa18.22■□□□□ 0.51
HPS3-202ENST00000460120 CYP2S1Q96SQ9 504 aa18.22■□□□□ 0.51
HPS3-202ENST00000460120 PRKD2Q9BZL6 878 aa18.22■□□□□ 0.51
HPS3-202ENST00000460120 EFCAB1Q9HAE3 211 aa18.22■□□□□ 0.51
HPS3-202ENST00000460120 IL1RL2Q9HB29 575 aa18.22■□□□□ 0.51
HPS3-202ENST00000460120 GMPR2Q9P2T1 348 aaKnown RBP18.22■□□□□ 0.51
HPS3-202ENST00000460120 PCDHGB4Q9UN71 923 aa18.22■□□□□ 0.51
HPS3-202ENST00000460120 PCDHGB5Q9Y5G0 923 aa18.22■□□□□ 0.51
HPS3-202ENST00000460120 LAMA3Q16787 3333 aa18.22■□□□□ 0.51
HPS3-202ENST00000460120 SCN10AQ9Y5Y9 1956 aa18.22■□□□□ 0.51
HPS3-202ENST00000460120 UBFD1O14562 309 aaKnown RBP18.22■□□□□ 0.51
HPS3-202ENST00000460120 RAMP2O60895 175 aa18.22■□□□□ 0.51
HPS3-202ENST00000460120 GPC4O75487 556 aa18.22■□□□□ 0.51
HPS3-202ENST00000460120 PTK2BQ14289 1009 aa18.22■□□□□ 0.51
HPS3-202ENST00000460120 PIGGQ5H8A4 983 aa18.22■□□□□ 0.51
HPS3-202ENST00000460120 ZNF598Q86UK7 904 aaKnown RBP18.22■□□□□ 0.51
HPS3-202ENST00000460120 DCP1BQ8IZD4 617 aaKnown RBP18.22■□□□□ 0.51
HPS3-202ENST00000460120 SCML4Q8N228 414 aa18.22■□□□□ 0.51
HPS3-202ENST00000460120 PQLC1Q8N2U9 271 aa18.22■□□□□ 0.51
HPS3-202ENST00000460120 CEP70Q8NHQ1 597 aa18.22■□□□□ 0.51
HPS3-202ENST00000460120 ZCWPW1Q9H0M4 648 aa18.22■□□□□ 0.51
HPS3-202ENST00000460120 CRISPLD1Q9H336 500 aa18.22■□□□□ 0.51
HPS3-202ENST00000460120 TSR3Q9UJK0 312 aaKnown RBP18.22■□□□□ 0.51
HPS3-202ENST00000460120 TDRD15B5MCY1 1934 aaKnown RBP18.22■□□□□ 0.51
HPS3-202ENST00000460120 A0A0U1RQS6 177 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms