RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 H3BM21 787 aa16.23■□□□□ 0.19
COL7A1-203ENST00000459756 TRAFD1O14545 582 aaPredicted RBP16.23■□□□□ 0.19
COL7A1-203ENST00000459756 SOCS5O75159 536 aa16.23■□□□□ 0.19
COL7A1-203ENST00000459756 CSF2P04141 144 aa16.23■□□□□ 0.19
COL7A1-203ENST00000459756 C6P13671 934 aa16.23■□□□□ 0.19
COL7A1-203ENST00000459756 CKMT2P17540 419 aa16.23■□□□□ 0.19
COL7A1-203ENST00000459756 CR2P20023 1033 aa16.23■□□□□ 0.19
COL7A1-203ENST00000459756 IGFALSP35858 605 aa16.23■□□□□ 0.19
COL7A1-203ENST00000459756 MMP13P45452 471 aa16.23■□□□□ 0.19
COL7A1-203ENST00000459756 LIG3P49916 1009 aa16.23■□□□□ 0.19
COL7A1-203ENST00000459756 THOP1P52888 689 aa16.23■□□□□ 0.19
COL7A1-203ENST00000459756 GALNT2Q10471 571 aa16.23■□□□□ 0.19
COL7A1-203ENST00000459756 DNAJC3Q13217 504 aa16.23■□□□□ 0.19
COL7A1-203ENST00000459756 LRRC14Q15048 493 aa16.23■□□□□ 0.19
COL7A1-203ENST00000459756 AGERQ15109 404 aa16.23■□□□□ 0.19
COL7A1-203ENST00000459756 HS1BP3Q53T59 392 aa16.23■□□□□ 0.19
COL7A1-203ENST00000459756 CCDC157Q569K6 752 aa16.23■□□□□ 0.19
COL7A1-203ENST00000459756 ZFYVE27Q5T4F4 411 aa16.23■□□□□ 0.19
COL7A1-203ENST00000459756 NCBP2-AS2Q69YL0 99 aa16.23■□□□□ 0.19
COL7A1-203ENST00000459756 PGBD5Q8N414 524 aa16.23■□□□□ 0.19
COL7A1-203ENST00000459756 KDF1Q8NAX2 398 aaPredicted RBP16.23■□□□□ 0.19
COL7A1-203ENST00000459756 TP53I13Q8NBR0 393 aaPredicted RBP16.23■□□□□ 0.19
COL7A1-203ENST00000459756 OR4C6Q8NH72 309 aa16.23■□□□□ 0.19
COL7A1-203ENST00000459756 RFFLQ8WZ73 363 aa16.23■□□□□ 0.19
COL7A1-203ENST00000459756 FAF2Q96CS3 445 aa16.23■□□□□ 0.19
COL7A1-203ENST00000459756 SCUBE2Q9NQ36 999 aa16.23■□□□□ 0.19
COL7A1-203ENST00000459756 UCKL1Q9NWZ5 548 aa16.23■□□□□ 0.19
COL7A1-203ENST00000459756 SHROOM3Q8TF72 1996 aa16.23■□□□□ 0.19
COL7A1-203ENST00000459756 TDRD6O60522 2096 aaKnown RBP16.22■□□□□ 0.19
COL7A1-203ENST00000459756 TRIM38O00635 465 aa16.22■□□□□ 0.19
COL7A1-203ENST00000459756 MFSD11O43934 449 aa16.22■□□□□ 0.19
COL7A1-203ENST00000459756 LZTS3O60299 673 aaPredicted RBP16.22■□□□□ 0.19
COL7A1-203ENST00000459756 RFPL3O75679 317 aa16.22■□□□□ 0.19
COL7A1-203ENST00000459756 ALPPL2P10696 532 aa16.22■□□□□ 0.19
COL7A1-203ENST00000459756 GARSP41250 739 aaKnown RBP16.22■□□□□ 0.19
COL7A1-203ENST00000459756 ACADVLP49748 655 aa16.22■□□□□ 0.19
COL7A1-203ENST00000459756 ILKQ13418 452 aa16.22■□□□□ 0.19
COL7A1-203ENST00000459756 TCEAL1Q15170 157 aa16.22■□□□□ 0.19
COL7A1-203ENST00000459756 IRF4Q15306 451 aa16.22■□□□□ 0.19
COL7A1-203ENST00000459756 SMAD1Q15797 465 aaKnown RBP16.22■□□□□ 0.19
COL7A1-203ENST00000459756 PROX2Q3B8N5 592 aa16.22■□□□□ 0.19
COL7A1-203ENST00000459756 ZNF542PQ5EBM4 170 aa16.22■□□□□ 0.19
COL7A1-203ENST00000459756 TEX26Q8N6G2 289 aa16.22■□□□□ 0.19
COL7A1-203ENST00000459756 TC2NQ8N9U0 490 aa16.22■□□□□ 0.19
COL7A1-203ENST00000459756 FATE1Q969F0 183 aa16.22■□□□□ 0.19
COL7A1-203ENST00000459756 NOD2Q9HC29 1040 aa16.22■□□□□ 0.19
COL7A1-203ENST00000459756 MBNL1Q9NR56 388 aaKnown RBP16.22■□□□□ 0.19
COL7A1-203ENST00000459756 NLGN3Q9NZ94 848 aa16.22■□□□□ 0.19
COL7A1-203ENST00000459756 LRRK1Q38SD2 2015 aa16.22■□□□□ 0.19
COL7A1-203ENST00000459756 FREM2Q5SZK8 3169 aa16.22■□□□□ 0.19
COL7A1-203ENST00000459756 IGF2RP11717 2491 aa16.21■□□□□ 0.19
COL7A1-203ENST00000459756 TTC24A2A3L6 582 aaPredicted RBP16.21■□□□□ 0.19
COL7A1-203ENST00000459756 ZNF487B1APH4 448 aa16.21■□□□□ 0.19
COL7A1-203ENST00000459756 SCAMP1O15126 338 aa16.21■□□□□ 0.19
COL7A1-203ENST00000459756 FFAR2O15552 330 aa16.21■□□□□ 0.19
COL7A1-203ENST00000459756 HTRA2O43464 458 aaPredicted RBP16.21■□□□□ 0.19
COL7A1-203ENST00000459756 SIGLEC6O43699 453 aa16.21■□□□□ 0.19
COL7A1-203ENST00000459756 PRKCGP05129 697 aa16.21■□□□□ 0.19
COL7A1-203ENST00000459756 JUNDP17535 347 aa16.21■□□□□ 0.19
COL7A1-203ENST00000459756 MX2P20592 715 aa16.21■□□□□ 0.19
COL7A1-203ENST00000459756 KDELR1P24390 212 aa16.21■□□□□ 0.19
COL7A1-203ENST00000459756 NFKBIAP25963 317 aa16.21■□□□□ 0.19
COL7A1-203ENST00000459756 PEX5P50542 639 aa16.21■□□□□ 0.19
COL7A1-203ENST00000459756 RALGDSQ12967 914 aa16.21■□□□□ 0.19
COL7A1-203ENST00000459756 IFI16Q16666 785 aaKnown RBP16.21■□□□□ 0.19
COL7A1-203ENST00000459756 WSCD2Q2TBF2 565 aa16.21■□□□□ 0.19
COL7A1-203ENST00000459756 TPRG1LQ5T0D9 272 aa16.21■□□□□ 0.19
COL7A1-203ENST00000459756 TIGD7Q6NT04 549 aaPredicted RBP16.21■□□□□ 0.19
COL7A1-203ENST00000459756 DHRS13Q6UX07 377 aa16.21■□□□□ 0.19
COL7A1-203ENST00000459756 MACC1Q6ZN28 852 aa16.21■□□□□ 0.19
COL7A1-203ENST00000459756 DPPA4Q7L190 304 aa16.21■□□□□ 0.19
COL7A1-203ENST00000459756 PQLC3Q8N755 202 aa16.21■□□□□ 0.19
COL7A1-203ENST00000459756 ZNF548Q8NEK5 533 aaPredicted RBP16.21■□□□□ 0.19
COL7A1-203ENST00000459756 BTN2A2Q8WVV5 523 aa16.21■□□□□ 0.19
COL7A1-203ENST00000459756 RAPGEF5Q92565 580 aa16.21■□□□□ 0.19
COL7A1-203ENST00000459756 NSMCE3Q96MG7 304 aa16.21■□□□□ 0.19
COL7A1-203ENST00000459756 TSGA13Q96PP4 275 aa16.21■□□□□ 0.19
COL7A1-203ENST00000459756 DUSP23Q9BVJ7 150 aa16.21■□□□□ 0.19
COL7A1-203ENST00000459756 HAUS2Q9NVX0 235 aa16.21■□□□□ 0.19
COL7A1-203ENST00000459756 COQ6Q9Y2Z9 468 aa16.21■□□□□ 0.19
COL7A1-203ENST00000459756 PCDHGC4Q9Y5F7 938 aa16.21■□□□□ 0.19
COL7A1-203ENST00000459756 CSNK1G3Q9Y6M4 447 aa16.21■□□□□ 0.19
COL7A1-203ENST00000459756 PLXNB3Q9ULL4 1909 aa16.2■□□□□ 0.18
COL7A1-203ENST00000459756 LRRD1A4D1F6 860 aa16.2■□□□□ 0.18
COL7A1-203ENST00000459756 MATN3O15232 486 aa16.2■□□□□ 0.18
COL7A1-203ENST00000459756 ELFN1P0C7U0 828 aa16.2■□□□□ 0.18
COL7A1-203ENST00000459756 GIMD1P0DJR0 217 aa16.2■□□□□ 0.18
COL7A1-203ENST00000459756 ACP1P24666 158 aa16.2■□□□□ 0.18
COL7A1-203ENST00000459756 CCNCP24863 283 aa16.2■□□□□ 0.18
COL7A1-203ENST00000459756 SLC1A1P43005 524 aa16.2■□□□□ 0.18
COL7A1-203ENST00000459756 MAXP61244 160 aa16.2■□□□□ 0.18
COL7A1-203ENST00000459756 SEMG2Q02383 582 aa16.2■□□□□ 0.18
COL7A1-203ENST00000459756 EIF2B5Q13144 721 aaKnown RBP16.2■□□□□ 0.18
COL7A1-203ENST00000459756 LRRC38Q5VT99 294 aa16.2■□□□□ 0.18
COL7A1-203ENST00000459756 LIPIQ6XZB0 460 aa16.2■□□□□ 0.18
COL7A1-203ENST00000459756 KDM7AQ6ZMT4 941 aa16.2■□□□□ 0.18
COL7A1-203ENST00000459756 TMPRSS12Q86WS5 348 aa16.2■□□□□ 0.18
COL7A1-203ENST00000459756 VSIG1Q86XK7 387 aa16.2■□□□□ 0.18
COL7A1-203ENST00000459756 MAML1Q92585 1016 aa16.2■□□□□ 0.18
COL7A1-203ENST00000459756 TBATAQ96M53 351 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms