RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 PCDHGA12O60330 932 aa20.89■□□□□ 0.93
VARS-218ENST00000459667 CCNB1P14635 433 aa20.89■□□□□ 0.93
VARS-218ENST00000459667 CDKN2BP42772 138 aa20.89■□□□□ 0.93
VARS-218ENST00000459667 MARCKSL1P49006 195 aa20.89■□□□□ 0.93
VARS-218ENST00000459667 POLR2LP62875 67 aaKnown RBP20.89■□□□□ 0.93
VARS-218ENST00000459667 FAM193AP78312 1265 aa20.89■□□□□ 0.93
VARS-218ENST00000459667 PPIDQ08752 370 aaKnown RBP20.89■□□□□ 0.93
VARS-218ENST00000459667 ITKQ08881 620 aa20.89■□□□□ 0.93
VARS-218ENST00000459667 NPNTQ6UXI9 565 aa20.89■□□□□ 0.93
VARS-218ENST00000459667 KYAT3Q6YP21 454 aaKnown RBP20.89■□□□□ 0.93
VARS-218ENST00000459667 SPOCD1Q6ZMY3 1216 aa20.89■□□□□ 0.93
VARS-218ENST00000459667 DBX2Q6ZNG2 339 aa20.89■□□□□ 0.93
VARS-218ENST00000459667 PTAR1Q7Z6K3 402 aaPredicted RBP20.89■□□□□ 0.93
VARS-218ENST00000459667 KATNAL2Q8IYT4 538 aa20.89■□□□□ 0.93
VARS-218ENST00000459667 PDCD6IPQ8WUM4 868 aaKnown RBP20.89■□□□□ 0.93
VARS-218ENST00000459667 DESI2Q9BSY9 194 aa20.89■□□□□ 0.93
VARS-218ENST00000459667 HAUS2Q9NVX0 235 aa20.89■□□□□ 0.93
VARS-218ENST00000459667 RBM22Q9NW64 420 aaKnown RBP eCLIP20.89■□□□□ 0.93
VARS-218ENST00000459667 PCOLCE2Q9UKZ9 415 aa20.89■□□□□ 0.93
VARS-218ENST00000459667 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.89■□□□□ 0.93
VARS-218ENST00000459667 TTLL3Q9Y4R7 772 aa20.89■□□□□ 0.93
VARS-218ENST00000459667 PCDHB9Q9Y5E1 797 aa20.89■□□□□ 0.93
VARS-218ENST00000459667 CABIN1Q9Y6J0 2220 aa20.89■□□□□ 0.93
VARS-218ENST00000459667 A0A1W2PQ67 120 aa20.88■□□□□ 0.93
VARS-218ENST00000459667 POM121BA6NF01 834 aa20.88■□□□□ 0.93
VARS-218ENST00000459667 HTRA2O43464 458 aaPredicted RBP20.88■□□□□ 0.93
VARS-218ENST00000459667 CPP00450 1065 aa20.88■□□□□ 0.93
VARS-218ENST00000459667 SEMG2Q02383 582 aa20.88■□□□□ 0.93
VARS-218ENST00000459667 TRAF2Q12933 501 aa20.88■□□□□ 0.93
VARS-218ENST00000459667 SHBQ15464 509 aa20.88■□□□□ 0.93
VARS-218ENST00000459667 Q6ZSR6 202 aa20.88■□□□□ 0.93
VARS-218ENST00000459667 BMFQ96LC9 184 aa20.88■□□□□ 0.93
VARS-218ENST00000459667 LGMNQ99538 433 aa20.88■□□□□ 0.93
VARS-218ENST00000459667 SEMA3CQ99985 751 aa20.88■□□□□ 0.93
VARS-218ENST00000459667 C1QTNF7Q9BXJ2 289 aa20.88■□□□□ 0.93
VARS-218ENST00000459667 AMACRQ9UHK6 382 aa20.88■□□□□ 0.93
VARS-218ENST00000459667 COQ6Q9Y2Z9 468 aa20.88■□□□□ 0.93
VARS-218ENST00000459667 LRRK1Q38SD2 2015 aa20.88■□□□□ 0.93
VARS-218ENST00000459667 PCNX2A6NKB5 2137 aa20.87■□□□□ 0.93
VARS-218ENST00000459667 SPAARA0A1B0GVQ0 90 aa20.87■□□□□ 0.93
VARS-218ENST00000459667 ZRANB2O95218 330 aaKnown RBP eCLIP20.87■□□□□ 0.93
VARS-218ENST00000459667 HLA-DQB2P05538 268 aa20.87■□□□□ 0.93
VARS-218ENST00000459667 KRT10P13645 584 aa20.87■□□□□ 0.93
VARS-218ENST00000459667 C6P13671 934 aa20.87■□□□□ 0.93
VARS-218ENST00000459667 EPHA8P29322 1005 aaPredicted RBP20.87■□□□□ 0.93
VARS-218ENST00000459667 LIG3P49916 1009 aa20.87■□□□□ 0.93
VARS-218ENST00000459667 KIF5AQ12840 1032 aa20.87■□□□□ 0.93
VARS-218ENST00000459667 TFDP2Q14188 446 aa20.87■□□□□ 0.93
VARS-218ENST00000459667 PDK1Q15118 436 aa20.87■□□□□ 0.93
VARS-218ENST00000459667 TAZQ16635 292 aa20.87■□□□□ 0.93
VARS-218ENST00000459667 INAVAQ3KP66 663 aa20.87■□□□□ 0.93
VARS-218ENST00000459667 TFDP3Q5H9I0 405 aa20.87■□□□□ 0.93
VARS-218ENST00000459667 KAZNQ674X7 775 aa20.87■□□□□ 0.93
VARS-218ENST00000459667 ALG1LQ6GMV1 187 aa20.87■□□□□ 0.93
VARS-218ENST00000459667 GATAD2AQ86YP4 633 aa20.87■□□□□ 0.93
VARS-218ENST00000459667 CCDC50Q8IVM0 306 aa20.87■□□□□ 0.93
VARS-218ENST00000459667 SLC22A18ASQ8N1D0 253 aa20.87■□□□□ 0.93
VARS-218ENST00000459667 SPOCK2Q92563 424 aa20.87■□□□□ 0.93
VARS-218ENST00000459667 ANP32BQ92688 251 aaKnown RBP20.87■□□□□ 0.93
VARS-218ENST00000459667 KRT35Q92764 455 aa20.87■□□□□ 0.93
VARS-218ENST00000459667 RBM41Q96IZ5 413 aaKnown RBP20.87■□□□□ 0.93
VARS-218ENST00000459667 OLFM3Q96PB7 478 aa20.87■□□□□ 0.93
VARS-218ENST00000459667 BTBD3Q9Y2F9 522 aa20.87■□□□□ 0.93
VARS-218ENST00000459667 KCNK1O00180 336 aa20.86■□□□□ 0.93
VARS-218ENST00000459667 PPP1R12AO14974 1030 aaPredicted RBP20.86■□□□□ 0.93
VARS-218ENST00000459667 CST8O60676 142 aa20.86■□□□□ 0.93
VARS-218ENST00000459667 CBFA2T3O75081 653 aa20.86■□□□□ 0.93
VARS-218ENST00000459667 CTNNA1P35221 906 aaKnown RBP20.86■□□□□ 0.93
VARS-218ENST00000459667 IGFALSP35858 605 aa20.86■□□□□ 0.93
VARS-218ENST00000459667 GRK6P43250 576 aa20.86■□□□□ 0.93
VARS-218ENST00000459667 RABIFP47224 123 aa20.86■□□□□ 0.93
VARS-218ENST00000459667 RXRGP48443 463 aa20.86■□□□□ 0.93
VARS-218ENST00000459667 SIM1P81133 766 aaPredicted RBP20.86■□□□□ 0.93
VARS-218ENST00000459667 DSC2Q02487 901 aa20.86■□□□□ 0.93
VARS-218ENST00000459667 AP1B1Q10567 949 aa20.86■□□□□ 0.93
VARS-218ENST00000459667 RALGDSQ12967 914 aa20.86■□□□□ 0.93
VARS-218ENST00000459667 LLGL1Q15334 1064 aa20.86■□□□□ 0.93
VARS-218ENST00000459667 TRIP6Q15654 476 aaKnown RBP20.86■□□□□ 0.93
VARS-218ENST00000459667 DPPA4Q7L190 304 aa20.86■□□□□ 0.93
VARS-218ENST00000459667 DCP2Q8IU60 420 aaKnown RBP20.86■□□□□ 0.93
VARS-218ENST00000459667 RCOR2Q8IZ40 523 aa20.86■□□□□ 0.93
VARS-218ENST00000459667 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.86■□□□□ 0.93
VARS-218ENST00000459667 TP53I13Q8NBR0 393 aaPredicted RBP20.86■□□□□ 0.93
VARS-218ENST00000459667 EXD1Q8NHP7 514 aa20.86■□□□□ 0.93
VARS-218ENST00000459667 KIAA1524Q8TCG1 905 aa20.86■□□□□ 0.93
VARS-218ENST00000459667 RHBDD1Q8TEB9 315 aa20.86■□□□□ 0.93
VARS-218ENST00000459667 SAP25Q8TEE9 199 aa20.86■□□□□ 0.93
VARS-218ENST00000459667 CENPTQ96BT3 561 aa20.86■□□□□ 0.93
VARS-218ENST00000459667 GPR27Q9NS67 375 aa20.86■□□□□ 0.93
VARS-218ENST00000459667 hCG_1818297A0A087WSY0 165 aa20.85■□□□□ 0.93
VARS-218ENST00000459667 MACROD2A1Z1Q3 448 aa20.85■□□□□ 0.93
VARS-218ENST00000459667 ARHGAP6O43182 974 aa20.85■□□□□ 0.93
VARS-218ENST00000459667 LZTS3O60299 673 aaPredicted RBP20.85■□□□□ 0.93
VARS-218ENST00000459667 ITGAVP06756 1048 aa20.85■□□□□ 0.93
VARS-218ENST00000459667 ELFN1P0C7U0 828 aa20.85■□□□□ 0.93
VARS-218ENST00000459667 TGM2P21980 687 aa20.85■□□□□ 0.93
VARS-218ENST00000459667 CES1P23141 567 aa20.85■□□□□ 0.93
VARS-218ENST00000459667 IFI35P80217 286 aaPredicted RBP20.85■□□□□ 0.93
VARS-218ENST00000459667 ZBTB17Q13105 803 aa20.85■□□□□ 0.93
VARS-218ENST00000459667 ARMC12Q5T9G4 340 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms