RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 GMIPQ9P107 970 aa12.52□□□□□ -0.41
LINC00959-201ENST00000456581 COPG1Q9Y678 874 aaKnown RBP12.52□□□□□ -0.41
LINC00959-201ENST00000456581 MYO7AQ13402 2215 aa12.52□□□□□ -0.41
LINC00959-201ENST00000456581 CASQ2O14958 399 aaPredicted RBP12.52□□□□□ -0.41
LINC00959-201ENST00000456581 PQBP1O60828 265 aaKnown RBP12.52□□□□□ -0.41
LINC00959-201ENST00000456581 CLPTM1O96005 669 aa12.52□□□□□ -0.41
LINC00959-201ENST00000456581 SLC35E2BP0CK96 405 aa12.52□□□□□ -0.41
LINC00959-201ENST00000456581 SOX11P35716 441 aa12.52□□□□□ -0.41
LINC00959-201ENST00000456581 RPL14P50914 215 aaKnown RBP12.52□□□□□ -0.41
LINC00959-201ENST00000456581 CCL23P55773 120 aa12.52□□□□□ -0.41
LINC00959-201ENST00000456581 GALNT2Q10471 571 aa12.52□□□□□ -0.41
LINC00959-201ENST00000456581 INSCQ1MX18 579 aa12.52□□□□□ -0.41
LINC00959-201ENST00000456581 MIB1Q86YT6 1006 aa12.52□□□□□ -0.41
LINC00959-201ENST00000456581 ARHGAP12Q8IWW6 846 aa12.52□□□□□ -0.41
LINC00959-201ENST00000456581 FAM81AQ8TBF8 368 aa12.52□□□□□ -0.41
LINC00959-201ENST00000456581 SNRNP27Q8WVK2 155 aaKnown RBP12.52□□□□□ -0.41
LINC00959-201ENST00000456581 TRIM8Q9BZR9 551 aa12.52□□□□□ -0.41
LINC00959-201ENST00000456581 ADA2Q9NZK5 511 aa12.52□□□□□ -0.41
LINC00959-201ENST00000456581 RGSL1A5PLK6 1076 aa12.51□□□□□ -0.41
LINC00959-201ENST00000456581 C9JVG2 144 aa12.51□□□□□ -0.41
LINC00959-201ENST00000456581 DLX3O60479 287 aa12.51□□□□□ -0.41
LINC00959-201ENST00000456581 OAZ2O95190 189 aa12.51□□□□□ -0.41
LINC00959-201ENST00000456581 AP2A1O95782 977 aa12.51□□□□□ -0.41
LINC00959-201ENST00000456581 AHSGP02765 367 aa12.51□□□□□ -0.41
LINC00959-201ENST00000456581 GALK1P51570 392 aa12.51□□□□□ -0.41
LINC00959-201ENST00000456581 MAPRE1Q15691 268 aaKnown RBP12.51□□□□□ -0.41
LINC00959-201ENST00000456581 LRRC23Q53EV4 343 aaPredicted RBP12.51□□□□□ -0.41
LINC00959-201ENST00000456581 TSTD2Q5T7W7 516 aa12.51□□□□□ -0.41
LINC00959-201ENST00000456581 ABI1Q8IZP0 508 aa12.51□□□□□ -0.41
LINC00959-201ENST00000456581 SLC43A3Q8NBI5 491 aa12.51□□□□□ -0.41
LINC00959-201ENST00000456581 C1QTNF1Q9BXJ1 281 aa12.51□□□□□ -0.41
LINC00959-201ENST00000456581 UNC93B1Q9H1C4 597 aa12.51□□□□□ -0.41
LINC00959-201ENST00000456581 ABCC13Q9NSE7 274 aa12.51□□□□□ -0.41
LINC00959-201ENST00000456581 IGSF9Q9P2J2 1179 aa12.51□□□□□ -0.41
LINC00959-201ENST00000456581 HDAC3O15379 428 aa12.51□□□□□ -0.41
LINC00959-201ENST00000456581 ATP5BP06576 529 aaKnown RBP12.51□□□□□ -0.41
LINC00959-201ENST00000456581 SELPP16109 830 aa12.51□□□□□ -0.41
LINC00959-201ENST00000456581 RPL17P18621 184 aaKnown RBP12.51□□□□□ -0.41
LINC00959-201ENST00000456581 KCNA5P22460 613 aa12.51□□□□□ -0.41
LINC00959-201ENST00000456581 HCAR3P49019 387 aa12.51□□□□□ -0.41
LINC00959-201ENST00000456581 VEGFBP49765 207 aa12.51□□□□□ -0.41
LINC00959-201ENST00000456581 EFEMP1Q12805 493 aa12.51□□□□□ -0.41
LINC00959-201ENST00000456581 RTP2Q5QGT7 225 aa12.51□□□□□ -0.41
LINC00959-201ENST00000456581 OR9I1Q8NGQ6 314 aa12.51□□□□□ -0.41
LINC00959-201ENST00000456581 BCL7CQ8WUZ0 217 aaPredicted RBP12.51□□□□□ -0.41
LINC00959-201ENST00000456581 HDAC11Q96DB2 347 aa12.51□□□□□ -0.41
LINC00959-201ENST00000456581 SLC29A1Q99808 456 aa12.51□□□□□ -0.41
LINC00959-201ENST00000456581 SLC39A8Q9C0K1 460 aa12.51□□□□□ -0.41
LINC00959-201ENST00000456581 VCX3BQ9H321 246 aa12.51□□□□□ -0.41
LINC00959-201ENST00000456581 EIF2B3Q9NR50 452 aaKnown RBP12.51□□□□□ -0.41
LINC00959-201ENST00000456581 SAGE1Q9NXZ1 904 aa12.51□□□□□ -0.41
LINC00959-201ENST00000456581 RNF11Q9Y3C5 154 aa12.51□□□□□ -0.41
LINC00959-201ENST00000456581 HS3ST4Q9Y661 456 aa12.51□□□□□ -0.41
LINC00959-201ENST00000456581 CCL22O00626 93 aa12.5□□□□□ -0.41
LINC00959-201ENST00000456581 INPPL1O15357 1258 aa12.5□□□□□ -0.41
LINC00959-201ENST00000456581 VAPBO95292 243 aa12.5□□□□□ -0.41
LINC00959-201ENST00000456581 CCR1P32246 355 aa12.5□□□□□ -0.41
LINC00959-201ENST00000456581 ETFBP38117 255 aa12.5□□□□□ -0.41
LINC00959-201ENST00000456581 SLC11A1P49279 550 aa12.5□□□□□ -0.41
LINC00959-201ENST00000456581 AIF1P55008 147 aa12.5□□□□□ -0.41
LINC00959-201ENST00000456581 NME5P56597 212 aa12.5□□□□□ -0.41
LINC00959-201ENST00000456581 ADGRE1Q14246 886 aa12.5□□□□□ -0.41
LINC00959-201ENST00000456581 MYBPC3Q14896 1274 aa12.5□□□□□ -0.41
LINC00959-201ENST00000456581 SH2D4BQ5SQS7 431 aa12.5□□□□□ -0.41
LINC00959-201ENST00000456581 PIK3R6Q5UE93 754 aa12.5□□□□□ -0.41
LINC00959-201ENST00000456581 PRSS55Q6UWB4 352 aaPredicted RBP12.5□□□□□ -0.41
LINC00959-201ENST00000456581 TMCO2Q7Z6W1 182 aaPredicted RBP12.5□□□□□ -0.41
LINC00959-201ENST00000456581 PXYLP1Q8TE99 480 aa12.5□□□□□ -0.41
LINC00959-201ENST00000456581 DPF3Q92784 378 aa12.5□□□□□ -0.41
LINC00959-201ENST00000456581 SEPT5Q99719 369 aaPredicted RBP12.5□□□□□ -0.41
LINC00959-201ENST00000456581 RBM38Q9H0Z9 239 aaKnown RBP12.5□□□□□ -0.41
LINC00959-201ENST00000456581 OSBPL2Q9H1P3 480 aa12.5□□□□□ -0.41
LINC00959-201ENST00000456581 PRDM16Q9HAZ2 1276 aa12.5□□□□□ -0.41
LINC00959-201ENST00000456581 MARCH5Q9NX47 278 aa12.5□□□□□ -0.41
LINC00959-201ENST00000456581 ARHGEF38Q9NXL2 777 aa12.5□□□□□ -0.41
LINC00959-201ENST00000456581 RRN3Q9NYV6 651 aa12.5□□□□□ -0.41
LINC00959-201ENST00000456581 GTSE1Q9NYZ3 720 aa12.5□□□□□ -0.41
LINC00959-201ENST00000456581 ADAM28Q9UKQ2 775 aa12.5□□□□□ -0.41
LINC00959-201ENST00000456581 COMMD3-BMI1R4GMX3 469 aa12.5□□□□□ -0.41
LINC00959-201ENST00000456581 ATP6AP2A0A1C7CYW4 349 aa12.5□□□□□ -0.41
LINC00959-201ENST00000456581 TTC24A2A3L6 582 aaPredicted RBP12.5□□□□□ -0.41
LINC00959-201ENST00000456581 ATP6AP2O75787 350 aa12.5□□□□□ -0.41
LINC00959-201ENST00000456581 VNN2O95498 520 aa12.5□□□□□ -0.41
LINC00959-201ENST00000456581 THRAP10827 490 aa12.5□□□□□ -0.41
LINC00959-201ENST00000456581 CDK4P11802 303 aa12.5□□□□□ -0.41
LINC00959-201ENST00000456581 UGT1A6P19224 532 aa12.5□□□□□ -0.41
LINC00959-201ENST00000456581 PPARGP37231 505 aaPredicted RBP12.5□□□□□ -0.41
LINC00959-201ENST00000456581 CHRNA4P43681 627 aa12.5□□□□□ -0.41
LINC00959-201ENST00000456581 NSUN2Q08J23 767 aaKnown RBP eCLIP12.5□□□□□ -0.41
LINC00959-201ENST00000456581 ART3Q13508 389 aa12.5□□□□□ -0.41
LINC00959-201ENST00000456581 ZNF789Q5FWF6 425 aa12.5□□□□□ -0.41
LINC00959-201ENST00000456581 DUS1LQ6P1R4 473 aaKnown RBP12.5□□□□□ -0.41
LINC00959-201ENST00000456581 CNSTQ6PJW8 725 aa12.5□□□□□ -0.41
LINC00959-201ENST00000456581 DEFB128Q7Z7B8 93 aa12.5□□□□□ -0.41
LINC00959-201ENST00000456581 ZC3HC1Q86WB0 502 aaKnown RBP12.5□□□□□ -0.41
LINC00959-201ENST00000456581 CIR1Q86X95 450 aaPredicted RBP12.5□□□□□ -0.41
LINC00959-201ENST00000456581 HMGCLL1Q8TB92 370 aa12.5□□□□□ -0.41
LINC00959-201ENST00000456581 SH3RF2Q8TEC5 729 aa12.5□□□□□ -0.41
LINC00959-201ENST00000456581 CASD1Q96PB1 797 aa12.5□□□□□ -0.41
LINC00959-201ENST00000456581 SMOC2Q9H3U7 446 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms