RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 SLC45A3Q96JT2 553 aa10.38□□□□□ -0.75
CLIP4-208ENST00000456385 MLPHQ9BV36 600 aaPredicted RBP10.38□□□□□ -0.75
CLIP4-208ENST00000456385 RHOJQ9H4E5 214 aa10.38□□□□□ -0.75
CLIP4-208ENST00000456385 MEAF6Q9HAF1 191 aa10.38□□□□□ -0.75
CLIP4-208ENST00000456385 CASS4Q9NQ75 786 aa10.38□□□□□ -0.75
CLIP4-208ENST00000456385 TBC1D13Q9NVG8 400 aa10.38□□□□□ -0.75
CLIP4-208ENST00000456385 SMPD3Q9NY59 655 aaPredicted RBP10.38□□□□□ -0.75
CLIP4-208ENST00000456385 TMEM9Q9P0T7 183 aa10.38□□□□□ -0.75
CLIP4-208ENST00000456385 MAP10Q9P2G4 905 aa10.38□□□□□ -0.75
CLIP4-208ENST00000456385 PGAP2Q9UHJ9 254 aa10.38□□□□□ -0.75
CLIP4-208ENST00000456385 PSME2Q9UL46 239 aa10.38□□□□□ -0.75
CLIP4-208ENST00000456385 B3GNT3Q9Y2A9 372 aa10.38□□□□□ -0.75
CLIP4-208ENST00000456385 TMEM98Q9Y2Y6 226 aa10.38□□□□□ -0.75
CLIP4-208ENST00000456385 KPNA4O00629 521 aaPredicted RBP10.37□□□□□ -0.75
CLIP4-208ENST00000456385 TOR1BO14657 336 aa10.37□□□□□ -0.75
CLIP4-208ENST00000456385 NPHS1O60500 1241 aa10.37□□□□□ -0.75
CLIP4-208ENST00000456385 SYNCRIPO60506 623 aaKnown RBP10.37□□□□□ -0.75
CLIP4-208ENST00000456385 SEC14L2O76054 403 aa10.37□□□□□ -0.75
CLIP4-208ENST00000456385 CPNE6O95741 557 aa10.37□□□□□ -0.75
CLIP4-208ENST00000456385 MBL2P11226 248 aaPredicted RBP10.37□□□□□ -0.75
CLIP4-208ENST00000456385 CD68P34810 354 aaPredicted RBP10.37□□□□□ -0.75
CLIP4-208ENST00000456385 HPCAL1P37235 193 aa10.37□□□□□ -0.75
CLIP4-208ENST00000456385 IFITM3Q01628 133 aa10.37□□□□□ -0.75
CLIP4-208ENST00000456385 POU5F1BQ06416 359 aa10.37□□□□□ -0.75
CLIP4-208ENST00000456385 TMEM132BQ14DG7 1078 aa10.37□□□□□ -0.75
CLIP4-208ENST00000456385 SPCS2Q15005 226 aa10.37□□□□□ -0.75
CLIP4-208ENST00000456385 AMHR2Q16671 573 aa10.37□□□□□ -0.75
CLIP4-208ENST00000456385 VPS26BQ4G0F5 336 aa10.37□□□□□ -0.75
CLIP4-208ENST00000456385 DEPDC1Q5TB30 811 aa10.37□□□□□ -0.75
CLIP4-208ENST00000456385 IER5Q5VY09 327 aa10.37□□□□□ -0.75
CLIP4-208ENST00000456385 CYHR1Q6ZMK1 362 aa10.37□□□□□ -0.75
CLIP4-208ENST00000456385 PIWIL4Q7Z3Z4 852 aaKnown RBP10.37□□□□□ -0.75
CLIP4-208ENST00000456385 SPRED1Q7Z699 444 aa10.37□□□□□ -0.75
CLIP4-208ENST00000456385 ADGRG5Q8IZF4 528 aa10.37□□□□□ -0.75
CLIP4-208ENST00000456385 C3orf30Q96M34 536 aa10.37□□□□□ -0.75
CLIP4-208ENST00000456385 MUS81Q96NY9 551 aa10.37□□□□□ -0.75
CLIP4-208ENST00000456385 CD320Q9NPF0 282 aa10.37□□□□□ -0.75
CLIP4-208ENST00000456385 PCDH12Q9NPG4 1184 aa10.37□□□□□ -0.75
CLIP4-208ENST00000456385 GIMAP2Q9UG22 337 aa10.37□□□□□ -0.75
CLIP4-208ENST00000456385 ZNF214Q9UL59 606 aaPredicted RBP10.37□□□□□ -0.75
CLIP4-208ENST00000456385 TRPC5Q9UL62 973 aaPredicted RBP10.37□□□□□ -0.75
CLIP4-208ENST00000456385 FZD10Q9ULW2 581 aa10.37□□□□□ -0.75
CLIP4-208ENST00000456385 MTF2Q9Y483 593 aaPredicted RBP10.37□□□□□ -0.75
CLIP4-208ENST00000456385 TRAF6Q9Y4K3 522 aa10.37□□□□□ -0.75
CLIP4-208ENST00000456385 V9GYQ6 96 aa10.37□□□□□ -0.75
CLIP4-208ENST00000456385 COL11A2P13942 1736 aaPredicted RBP10.37□□□□□ -0.75
CLIP4-208ENST00000456385 ANK1P16157 1881 aa10.37□□□□□ -0.75
CLIP4-208ENST00000456385 INPP4BO15327 924 aa10.36□□□□□ -0.75
CLIP4-208ENST00000456385 JRKO75564 520 aa10.36□□□□□ -0.75
CLIP4-208ENST00000456385 MMP10P09238 476 aa10.36□□□□□ -0.75
CLIP4-208ENST00000456385 ALDOCP09972 364 aaKnown RBP10.36□□□□□ -0.75
CLIP4-208ENST00000456385 AXLP30530 894 aa10.36□□□□□ -0.75
CLIP4-208ENST00000456385 CHRNA5P30532 468 aa10.36□□□□□ -0.75
CLIP4-208ENST00000456385 ATICP31939 592 aa10.36□□□□□ -0.75
CLIP4-208ENST00000456385 RPS9P46781 194 aaKnown RBP10.36□□□□□ -0.75
CLIP4-208ENST00000456385 RAB10P61026 200 aa10.36□□□□□ -0.75
CLIP4-208ENST00000456385 AQP6Q13520 282 aa10.36□□□□□ -0.75
CLIP4-208ENST00000456385 INPP5AQ14642 412 aa10.36□□□□□ -0.75
CLIP4-208ENST00000456385 CYP51A1Q16850 503 aa10.36□□□□□ -0.75
CLIP4-208ENST00000456385 PGS1Q32NB8 556 aa10.36□□□□□ -0.75
CLIP4-208ENST00000456385 SLC10A6Q3KNW5 377 aa10.36□□□□□ -0.75
CLIP4-208ENST00000456385 CCNYL2Q5T2Q4 361 aa10.36□□□□□ -0.75
CLIP4-208ENST00000456385 KCTD11Q693B1 232 aa10.36□□□□□ -0.75
CLIP4-208ENST00000456385 CUZD1Q86UP6 607 aa10.36□□□□□ -0.75
CLIP4-208ENST00000456385 IFNEQ86WN2 208 aa10.36□□□□□ -0.75
CLIP4-208ENST00000456385 ERO1BQ86YB8 467 aa10.36□□□□□ -0.75
CLIP4-208ENST00000456385 REPS2Q8NFH8 660 aa10.36□□□□□ -0.75
CLIP4-208ENST00000456385 C17orf50Q8WW18 174 aa10.36□□□□□ -0.75
CLIP4-208ENST00000456385 ZUFSPQ96AP4 578 aa10.36□□□□□ -0.75
CLIP4-208ENST00000456385 PHF21BQ96EK2 531 aa10.36□□□□□ -0.75
CLIP4-208ENST00000456385 SH3YL1Q96HL8 342 aaPredicted RBP10.36□□□□□ -0.75
CLIP4-208ENST00000456385 MYRFLQ96LU7 910 aa10.36□□□□□ -0.75
CLIP4-208ENST00000456385 TUBA1CQ9BQE3 449 aa10.36□□□□□ -0.75
CLIP4-208ENST00000456385 EIF2AQ9BY44 585 aaKnown RBP10.36□□□□□ -0.75
CLIP4-208ENST00000456385 MROQ9BYG7 248 aa10.36□□□□□ -0.75
CLIP4-208ENST00000456385 MRPL46Q9H2W6 279 aaKnown RBP10.36□□□□□ -0.75
CLIP4-208ENST00000456385 FZD8Q9H461 694 aa10.36□□□□□ -0.75
CLIP4-208ENST00000456385 DPEP3Q9H4B8 488 aa10.36□□□□□ -0.75
CLIP4-208ENST00000456385 SIAEQ9HAT2 523 aa10.36□□□□□ -0.75
CLIP4-208ENST00000456385 CHST12Q9NRB3 414 aa10.36□□□□□ -0.75
CLIP4-208ENST00000456385 CMTM6Q9NX76 183 aa10.36□□□□□ -0.75
CLIP4-208ENST00000456385 PKD2L2Q9NZM6 624 aa10.36□□□□□ -0.75
CLIP4-208ENST00000456385 DNMT3BQ9UBC3 853 aaKnown RBP10.36□□□□□ -0.75
CLIP4-208ENST00000456385 POU2F3Q9UKI9 436 aa10.36□□□□□ -0.75
CLIP4-208ENST00000456385 RAD54BQ9Y620 910 aa10.36□□□□□ -0.75
CLIP4-208ENST00000456385 FAM95CA0A1B0GW59 222 aa10.36□□□□□ -0.75
CLIP4-208ENST00000456385 AQP12BA6NM10 295 aa10.36□□□□□ -0.75
CLIP4-208ENST00000456385 ZBTB42B2RXF5 422 aa10.36□□□□□ -0.75
CLIP4-208ENST00000456385 FAM72CH0Y354 149 aa10.36□□□□□ -0.75
CLIP4-208ENST00000456385 NR5A2O00482 541 aa10.36□□□□□ -0.75
CLIP4-208ENST00000456385 UBFD1O14562 309 aaKnown RBP10.36□□□□□ -0.75
CLIP4-208ENST00000456385 ARPC2O15144 300 aa10.36□□□□□ -0.75
CLIP4-208ENST00000456385 AXIN1O15169 862 aa10.36□□□□□ -0.75
CLIP4-208ENST00000456385 PEX10O60683 326 aa10.36□□□□□ -0.75
CLIP4-208ENST00000456385 XYLBO75191 536 aa10.36□□□□□ -0.75
CLIP4-208ENST00000456385 FARP2O94887 1054 aaPredicted RBP10.36□□□□□ -0.75
CLIP4-208ENST00000456385 NCK1P16333 377 aa10.36□□□□□ -0.75
CLIP4-208ENST00000456385 ADORA2BP29275 332 aa10.36□□□□□ -0.75
CLIP4-208ENST00000456385 PLA2G16P53816 162 aa10.36□□□□□ -0.75
CLIP4-208ENST00000456385 RAD23AP54725 363 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms