RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 SNRNP200O75643 2136 aaKnown RBP4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 VAPBO95292 243 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 APOEP02649 317 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 PFKMP08237 780 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 CLEC2LP0C7M8 214 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 HSPA8P11142 646 aaKnown RBP4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 BMP2P12643 396 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 YBX3P16989 372 aaKnown RBP eCLIP4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 GNA15P30679 374 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 VBP1P61758 197 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 NPTX1Q15818 432 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 NIPAL1Q6NVV3 410 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 TMEM207Q6UWW9 146 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 ZNF551Q7Z340 670 aaPredicted RBP4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 IFNEQ86WN2 208 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 MAP4K3Q8IVH8 894 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 DENND6AQ8IWF6 608 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 RNF170Q96K19 258 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 CNDP1Q96KN2 507 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 MPHOSPH6Q99547 160 aaKnown RBP4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 KIFC1Q9BW19 673 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 PDGFDQ9GZP0 370 aaPredicted RBP4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 IL1RL2Q9HB29 575 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 FANCEQ9HB96 536 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 SNX15Q9NRS6 342 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 CISHQ9NSE2 258 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 FBXO40Q9UH90 709 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 IPO11Q9UI26 975 aaKnown RBP4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 ALPK3Q96L96 1907 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 HDAC3O15379 428 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 POU3F3P20264 500 aaPredicted RBP4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 GPD2P43304 727 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 GABRB2P47870 512 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 PSMD8P48556 350 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 SP2Q02086 613 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 CBLBQ13191 982 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 MEP1AQ16819 746 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 CLEC6AQ6EIG7 209 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 RWDD4Q6NW29 188 aaKnown RBP4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 PRR23CQ6ZRP0 262 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 DYNC2LI1Q8TCX1 351 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 RXFP2Q8WXD0 754 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 JADE3Q92613 823 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 ITPKCQ96DU7 683 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 ZNF347Q96SE7 839 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 SLC30A3Q99726 388 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 AASDHPPTQ9NRN7 309 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 TMEM184CQ9NVA4 438 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 EVA1BQ9NVM1 165 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 CNOT6Q9ULM6 557 aaKnown RBP4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 BSNQ9UPA5 3926 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 AKR7A2O43488 359 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 BAIAP3O94812 1187 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 ASS1P00966 412 aaKnown RBP4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 MAGEA6P43360 314 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 RABGGTBP53611 331 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 HSP90AA5PQ58FG0 334 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 PAGE3Q5JUK9 113 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 BSPRYQ5W0U4 402 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 DESI1Q6ICB0 168 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 KIAA0408Q6ZU52 694 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 HEATR4Q86WZ0 1026 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 LYSMD2Q8IV50 215 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 IQCF2Q8IXL9 164 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 PGAM4Q8N0Y7 254 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 GLB1L3Q8NCI6 653 aaPredicted RBP4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 FRS2Q8WU20 508 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 LRGUKQ96M69 825 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 ACE2Q9BYF1 805 aaPredicted RBP4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 FOXP3Q9BZS1 431 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 AMBNQ9NP70 447 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 ASNSD1Q9NWL6 643 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 THG1LQ9NWX6 298 aaKnown RBP4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 ANKMY1Q9P2S6 941 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 PSME2Q9UL46 239 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 RABL2BQ9UNT1 228 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 ASB1Q9Y576 335 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 DCHS2Q6V1P9 2916 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 COL14A1Q05707 1796 aaKnown RBP4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 H3BMM5 538 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 CCRL2O00421 344 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 TBX3O15119 743 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 TBX1O43435 398 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 GMNNO75496 209 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 P4HBP07237 508 aaKnown RBP4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 CPA3P15088 417 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 ZNF12P17014 697 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 MYF6P23409 242 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 PRDX3P30048 256 aaKnown RBP4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 ARL1P40616 181 aaPredicted RBP4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 EIF2DP41214 584 aaKnown RBP4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 MAGEA12P43365 314 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 HTR3AP46098 478 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 RAP1GAPP47736 663 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 RFX2P48378 723 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 GHRHRQ02643 423 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 CDO1Q16878 200 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 RGS21Q2M5E4 152 aa4.57□□□□□ -1.68
DEPDC1-202ENST00000456315 ARTNQ5T4W7 220 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms