RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 PRKCGP05129 697 aa21.37■■□□□ 1.01
HMGB3-205ENST00000455596 KRT7P08729 469 aa21.37■■□□□ 1.01
HMGB3-205ENST00000455596 ACP1P24666 158 aa21.37■■□□□ 1.01
HMGB3-205ENST00000455596 MAN1A1P33908 653 aa21.37■■□□□ 1.01
HMGB3-205ENST00000455596 LIG3P49916 1009 aa21.37■■□□□ 1.01
HMGB3-205ENST00000455596 TAS2R40P59535 323 aa21.37■■□□□ 1.01
HMGB3-205ENST00000455596 DAB2P98082 770 aa21.37■■□□□ 1.01
HMGB3-205ENST00000455596 IRF4Q15306 451 aa21.37■■□□□ 1.01
HMGB3-205ENST00000455596 TPRG1LQ5T0D9 272 aa21.37■■□□□ 1.01
HMGB3-205ENST00000455596 MARC1Q5VT66 337 aa21.37■■□□□ 1.01
HMGB3-205ENST00000455596 TMPRSS12Q86WS5 348 aa21.37■■□□□ 1.01
HMGB3-205ENST00000455596 CPNE8Q86YQ8 564 aa21.37■■□□□ 1.01
HMGB3-205ENST00000455596 LRRC49Q8IUZ0 686 aa21.37■■□□□ 1.01
HMGB3-205ENST00000455596 MAP7D3Q8IWC1 876 aa21.37■■□□□ 1.01
HMGB3-205ENST00000455596 BTN2A2Q8WVV5 523 aa21.37■■□□□ 1.01
HMGB3-205ENST00000455596 NUDCD1Q96RS6 583 aa21.37■■□□□ 1.01
HMGB3-205ENST00000455596 ZNF670Q9BS34 389 aa21.37■■□□□ 1.01
HMGB3-205ENST00000455596 DUSP23Q9BVJ7 150 aa21.37■■□□□ 1.01
HMGB3-205ENST00000455596 SCUBE2Q9NQ36 999 aa21.37■■□□□ 1.01
HMGB3-205ENST00000455596 SPTLC3Q9NUV7 552 aa21.37■■□□□ 1.01
HMGB3-205ENST00000455596 KMT2BQ9UMN6 2715 aaPredicted RBP21.37■■□□□ 1.01
HMGB3-205ENST00000455596 CFAP69A5D8W1 941 aa21.36■■□□□ 1.01
HMGB3-205ENST00000455596 LZTS3O60299 673 aaPredicted RBP21.36■■□□□ 1.01
HMGB3-205ENST00000455596 GIMD1P0DJR0 217 aa21.36■■□□□ 1.01
HMGB3-205ENST00000455596 JUNDP17535 347 aa21.36■■□□□ 1.01
HMGB3-205ENST00000455596 SEMG2Q02383 582 aa21.36■■□□□ 1.01
HMGB3-205ENST00000455596 EIF2B5Q13144 721 aaKnown RBP21.36■■□□□ 1.01
HMGB3-205ENST00000455596 PAFAH1B3Q15102 231 aaKnown RBP21.36■■□□□ 1.01
HMGB3-205ENST00000455596 AGERQ15109 404 aa21.36■■□□□ 1.01
HMGB3-205ENST00000455596 ZFYVE27Q5T4F4 411 aa21.36■■□□□ 1.01
HMGB3-205ENST00000455596 NCBP2-AS2Q69YL0 99 aa21.36■■□□□ 1.01
HMGB3-205ENST00000455596 PGBD5Q8N414 524 aa21.36■■□□□ 1.01
HMGB3-205ENST00000455596 ZNF548Q8NEK5 533 aaPredicted RBP21.36■■□□□ 1.01
HMGB3-205ENST00000455596 SLC35G2Q8TBE7 412 aa21.36■■□□□ 1.01
HMGB3-205ENST00000455596 NSMCE3Q96MG7 304 aa21.36■■□□□ 1.01
HMGB3-205ENST00000455596 MGME1Q9BQP7 344 aa21.36■■□□□ 1.01
HMGB3-205ENST00000455596 KLF15Q9UIH9 416 aa21.36■■□□□ 1.01
HMGB3-205ENST00000455596 CSNK1G3Q9Y6M4 447 aa21.36■■□□□ 1.01
HMGB3-205ENST00000455596 GOLGA4Q13439 2230 aaKnown RBP21.36■■□□□ 1.01
HMGB3-205ENST00000455596 AKAP13Q12802 2813 aa21.35■■□□□ 1.01
HMGB3-205ENST00000455596 A0A1W2PQ67 120 aa21.35■■□□□ 1.01
HMGB3-205ENST00000455596 TTC24A2A3L6 582 aaPredicted RBP21.35■■□□□ 1.01
HMGB3-205ENST00000455596 FAM149AA5PLN7 773 aa21.35■■□□□ 1.01
HMGB3-205ENST00000455596 TMEM110-MUSTN1A8MSY1 372 aa21.35■■□□□ 1.01
HMGB3-205ENST00000455596 AKR1B15C9JRZ8 316 aaPredicted RBP21.35■■□□□ 1.01
HMGB3-205ENST00000455596 MFSD11O43934 449 aa21.35■■□□□ 1.01
HMGB3-205ENST00000455596 SOCS5O75159 536 aa21.35■■□□□ 1.01
HMGB3-205ENST00000455596 CR2P20023 1033 aa21.35■■□□□ 1.01
HMGB3-205ENST00000455596 HNF1BP35680 557 aa21.35■■□□□ 1.01
HMGB3-205ENST00000455596 MMP13P45452 471 aa21.35■■□□□ 1.01
HMGB3-205ENST00000455596 RALGDSQ12967 914 aa21.35■■□□□ 1.01
HMGB3-205ENST00000455596 MESDQ14696 234 aa21.35■■□□□ 1.01
HMGB3-205ENST00000455596 WSCD2Q2TBF2 565 aa21.35■■□□□ 1.01
HMGB3-205ENST00000455596 ANKRD20A8PQ5CZ79 823 aa21.35■■□□□ 1.01
HMGB3-205ENST00000455596 RALGPS1Q5JS13 557 aa21.35■■□□□ 1.01
HMGB3-205ENST00000455596 MACC1Q6ZN28 852 aa21.35■■□□□ 1.01
HMGB3-205ENST00000455596 MARCH9Q86YJ5 346 aa21.35■■□□□ 1.01
HMGB3-205ENST00000455596 RHOT2Q8IXI1 618 aa21.35■■□□□ 1.01
HMGB3-205ENST00000455596 PCDH19Q8TAB3 1148 aa21.35■■□□□ 1.01
HMGB3-205ENST00000455596 CACNA1BQ00975 2339 aa21.35■■□□□ 1.01
HMGB3-205ENST00000455596 CEP295Q9C0D2 2601 aa21.34■■□□□ 1.01
HMGB3-205ENST00000455596 K7ESM1 405 aa21.34■■□□□ 1.01
HMGB3-205ENST00000455596 AQP9O43315 295 aa21.34■■□□□ 1.01
HMGB3-205ENST00000455596 HTRA2O43464 458 aaPredicted RBP21.34■■□□□ 1.01
HMGB3-205ENST00000455596 NEBLO76041 1014 aa21.34■■□□□ 1.01
HMGB3-205ENST00000455596 ELFN1P0C7U0 828 aa21.34■■□□□ 1.01
HMGB3-205ENST00000455596 JUPP14923 745 aa21.34■■□□□ 1.01
HMGB3-205ENST00000455596 GARSP41250 739 aaKnown RBP21.34■■□□□ 1.01
HMGB3-205ENST00000455596 PEX5P50542 639 aa21.34■■□□□ 1.01
HMGB3-205ENST00000455596 MAXP61244 160 aa21.34■■□□□ 1.01
HMGB3-205ENST00000455596 GALNT2Q10471 571 aa21.34■■□□□ 1.01
HMGB3-205ENST00000455596 TIGD7Q6NT04 549 aaPredicted RBP21.34■■□□□ 1.01
HMGB3-205ENST00000455596 SARM1Q6SZW1 724 aa21.34■■□□□ 1.01
HMGB3-205ENST00000455596 LIPIQ6XZB0 460 aa21.34■■□□□ 1.01
HMGB3-205ENST00000455596 DPPA4Q7L190 304 aa21.34■■□□□ 1.01
HMGB3-205ENST00000455596 PHACTR4Q8IZ21 702 aa21.34■■□□□ 1.01
HMGB3-205ENST00000455596 PDCD6IPQ8WUM4 868 aaKnown RBP21.34■■□□□ 1.01
HMGB3-205ENST00000455596 APOLD1Q96LR9 279 aa21.34■■□□□ 1.01
HMGB3-205ENST00000455596 TRIM5Q9C035 493 aa21.34■■□□□ 1.01
HMGB3-205ENST00000455596 CCDC86Q9H6F5 360 aaKnown RBP21.34■■□□□ 1.01
HMGB3-205ENST00000455596 NOD2Q9HC29 1040 aa21.34■■□□□ 1.01
HMGB3-205ENST00000455596 EVA1BQ9NVM1 165 aa21.34■■□□□ 1.01
HMGB3-205ENST00000455596 SPASTQ9UBP0 616 aa21.34■■□□□ 1.01
HMGB3-205ENST00000455596 APOBEC3BQ9UH17 382 aaKnown RBP21.34■■□□□ 1.01
HMGB3-205ENST00000455596 PCDHGC4Q9Y5F7 938 aa21.34■■□□□ 1.01
HMGB3-205ENST00000455596 CPP00450 1065 aa21.33■■□□□ 1.01
HMGB3-205ENST00000455596 CAPNS1P04632 268 aa21.33■■□□□ 1.01
HMGB3-205ENST00000455596 CKMT1AP12532 417 aa21.33■■□□□ 1.01
HMGB3-205ENST00000455596 NFKBIAP25963 317 aa21.33■■□□□ 1.01
HMGB3-205ENST00000455596 ARHGAP25P42331 645 aa21.33■■□□□ 1.01
HMGB3-205ENST00000455596 TBX2Q13207 712 aaPredicted RBP21.33■■□□□ 1.01
HMGB3-205ENST00000455596 MTM1Q13496 603 aa21.33■■□□□ 1.01
HMGB3-205ENST00000455596 INPP5AQ14642 412 aa21.33■■□□□ 1.01
HMGB3-205ENST00000455596 IFI16Q16666 785 aaKnown RBP21.33■■□□□ 1.01
HMGB3-205ENST00000455596 HES3Q5TGS1 186 aa21.33■■□□□ 1.01
HMGB3-205ENST00000455596 RBFAQ8N0V3 343 aa21.33■■□□□ 1.01
HMGB3-205ENST00000455596 TEX26Q8N6G2 289 aa21.33■■□□□ 1.01
HMGB3-205ENST00000455596 FAM181AQ8N9Y4 354 aa21.33■■□□□ 1.01
HMGB3-205ENST00000455596 LMX1AQ8TE12 382 aa21.33■■□□□ 1.01
HMGB3-205ENST00000455596 SPOCK2Q92563 424 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms