RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 TRIM38O00635 465 aa4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 TNFRSF10CO14798 259 aa4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 LATO43561 262 aa4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 PLRG1O43660 514 aaKnown RBP4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 DFNA5O60443 496 aa4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 CLDN11O75508 207 aa4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 ZNF821O75541 412 aaPredicted RBP4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 DAB1O75553 588 aa4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 PCDH8O95206 1070 aa4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 GJB6O95452 261 aa4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 RHOCP08134 193 aa4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 GLI1P08151 1106 aa4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 MMEP08473 750 aa4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 CYP11B1P15538 503 aa4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 MAP4P27816 1152 aaKnown RBP4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 ITPKBP27987 946 aa4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 GKP32189 559 aa4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 CHRNA3P32297 505 aa4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 FLT3P36888 993 aa4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 CXCR3P49682 368 aa4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 KLK7P49862 253 aa4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 DNA2P51530 1060 aa4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 CDH4P55283 916 aa4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 CLDN2P57739 230 aa4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 NXPH1P58417 271 aa4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 UBE2HP62256 183 aa4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 SEMG2Q02383 582 aa4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 DEUP1Q05D60 604 aa4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 TARDBPQ13148 414 aaKnown RBP eCLIP4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 SLC12A1Q13621 1099 aa4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 ELAVL3Q14576 367 aaKnown RBP4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 SMAD1Q15797 465 aaKnown RBP4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 MEA1Q16626 185 aa4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 MAN2A1Q16706 1144 aa4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 DPCR1Q3MIW9 517 aa4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 C5orf22Q49AR2 442 aa4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 VWA3BQ502W6 1294 aa4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 SOWAHCQ53LP3 525 aaPredicted RBP4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 SLC45A4Q5BKX6 768 aa4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 RABGAP1LQ5R372 815 aa4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 ARTNQ5T4W7 220 aa4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 FAM102AQ5T9C2 384 aaPredicted RBP4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 PIP5KL1Q5T9C9 394 aa4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 KLHDC7AQ5VTJ3 777 aa4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 FAM46CQ5VWP2 391 aa4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 CDCP2Q5VXM1 449 aa4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 SLC6A19Q695T7 634 aa4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 NAPEPLDQ6IQ20 393 aa4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 KDM7AQ6ZMT4 941 aa4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 LEKR1Q6ZMV7 388 aa4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 SLC26A9Q7LBE3 791 aa4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 NOP9Q86U38 636 aaKnown RBP4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 XYLT1Q86Y38 959 aa4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 ZNF683Q8IZ20 524 aa4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 GALNT15Q8N3T1 639 aa4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 SLC25A45Q8N413 288 aa4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 EMC1Q8N766 993 aa4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 MFSD2AQ8NA29 543 aa4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 MLKLQ8NB16 471 aa4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 OR2A12Q8NGT7 310 aa4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 SLC30A5Q8TAD4 765 aa4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 ARRDC3Q96B67 414 aa4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 SKA1Q96BD8 255 aa4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 C18orf8Q96DM3 657 aa4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 FAM81BQ96LP2 452 aa4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 CFAP57Q96MR6 1250 aa4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 NOX5Q96PH1 765 aa4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 SPAG5Q96R06 1193 aa4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 SRPK1Q96SB4 655 aaKnown RBP4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 TUBGCP2Q9BSJ2 902 aa4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 ASNSD1Q9NWL6 643 aa4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 UCKL1Q9NWZ5 548 aa4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 ARHGEF38Q9NXL2 777 aa4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 VPS51Q9UID3 782 aa4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 TBC1D30Q9Y2I9 924 aa4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 COL5A1P20908 1838 aaPredicted RBP4.79□□□□□ -1.64
GTF3C3-208ENST00000455546 PKD1L2Q7Z442 2459 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 FAM181BA6NEQ2 426 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 E9PAM4 449 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 C1QTNF3-AMACRE9PGA6 284 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 FAM72CH0Y354 149 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 RAD51BO15315 384 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 FFAR2O15552 330 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 SIGLEC6O43699 453 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 TLX3O43711 291 aaPredicted RBP4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 LEFTY1O75610 366 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 RFPL3O75679 317 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 NEBLO76041 1014 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 GFPT2O94808 682 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 LRIG2O94898 1065 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 UBOX5O94941 541 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 CD160O95971 181 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 PAK4O96013 591 aaPredicted RBP4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 THEGLP0DJG4 465 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 UCHL3P15374 230 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 CHRNB2P17787 502 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 ITIH2P19823 946 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 EPHA8P29322 1005 aaPredicted RBP4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 OR1E1P30953 314 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 CDH5P33151 784 aaPredicted RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms