RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 OLFM1Q99784 485 aa12.6□□□□□ -0.39
ECHDC1-209ENST00000454591 ADAM2Q99965 735 aa12.6□□□□□ -0.39
ECHDC1-209ENST00000454591 YIPF3Q9GZM5 350 aa12.6□□□□□ -0.39
ECHDC1-209ENST00000454591 NDUFA13Q9P0J0 144 aa12.6□□□□□ -0.39
ECHDC1-209ENST00000454591 DTNAQ9Y4J8 743 aa12.6□□□□□ -0.39
ECHDC1-209ENST00000454591 SLC4A7Q9Y6M7 1214 aa12.6□□□□□ -0.39
ECHDC1-209ENST00000454591 GREB1Q4ZG55 1949 aa12.6□□□□□ -0.39
ECHDC1-209ENST00000454591 NEMP1O14524 444 aa12.59□□□□□ -0.39
ECHDC1-209ENST00000454591 S1PR4O95977 384 aa12.59□□□□□ -0.39
ECHDC1-209ENST00000454591 JUNP05412 331 aaKnown RBP12.59□□□□□ -0.39
ECHDC1-209ENST00000454591 ITGB1P05556 798 aa12.59□□□□□ -0.39
ECHDC1-209ENST00000454591 C8BP07358 591 aa12.59□□□□□ -0.39
ECHDC1-209ENST00000454591 XRCC1P18887 633 aaPredicted RBP12.59□□□□□ -0.39
ECHDC1-209ENST00000454591 IMPDH1P20839 514 aa12.59□□□□□ -0.39
ECHDC1-209ENST00000454591 CHRNA4P43681 627 aa12.59□□□□□ -0.39
ECHDC1-209ENST00000454591 HSPA13P48723 471 aa12.59□□□□□ -0.39
ECHDC1-209ENST00000454591 AQP4P55087 323 aa12.59□□□□□ -0.39
ECHDC1-209ENST00000454591 TBX4P57082 545 aa12.59□□□□□ -0.39
ECHDC1-209ENST00000454591 USP46P62068 366 aa12.59□□□□□ -0.39
ECHDC1-209ENST00000454591 FAM189BP81408 668 aa12.59□□□□□ -0.39
ECHDC1-209ENST00000454591 FLOT2Q14254 428 aa12.59□□□□□ -0.39
ECHDC1-209ENST00000454591 ZNF460Q14592 562 aa12.59□□□□□ -0.39
ECHDC1-209ENST00000454591 TRIP10Q15642 601 aa12.59□□□□□ -0.39
ECHDC1-209ENST00000454591 PARP15Q460N3 678 aa12.59□□□□□ -0.39
ECHDC1-209ENST00000454591 C5orf22Q49AR2 442 aa12.59□□□□□ -0.39
ECHDC1-209ENST00000454591 MS4A13Q5J8X5 152 aa12.59□□□□□ -0.39
ECHDC1-209ENST00000454591 RARS2Q5T160 578 aaKnown RBP12.59□□□□□ -0.39
ECHDC1-209ENST00000454591 HECTD2Q5U5R9 776 aa12.59□□□□□ -0.39
ECHDC1-209ENST00000454591 MARC1Q5VT66 337 aa12.59□□□□□ -0.39
ECHDC1-209ENST00000454591 RNF220Q5VTB9 566 aa12.59□□□□□ -0.39
ECHDC1-209ENST00000454591 LPCAT4Q643R3 524 aa12.59□□□□□ -0.39
ECHDC1-209ENST00000454591 FAM43BQ6ZT52 329 aaPredicted RBP12.59□□□□□ -0.39
ECHDC1-209ENST00000454591 ST13P4Q8IZP2 240 aaPredicted RBP12.59□□□□□ -0.39
ECHDC1-209ENST00000454591 RIN3Q8TB24 985 aa12.59□□□□□ -0.39
ECHDC1-209ENST00000454591 FEM1CQ96JP0 617 aa12.59□□□□□ -0.39
ECHDC1-209ENST00000454591 BTN2A3PQ96KV6 586 aa12.59□□□□□ -0.39
ECHDC1-209ENST00000454591 ZNF599Q96NL3 588 aa12.59□□□□□ -0.39
ECHDC1-209ENST00000454591 UNC93B1Q9H1C4 597 aa12.59□□□□□ -0.39
ECHDC1-209ENST00000454591 GSTO2Q9H4Y5 243 aa12.59□□□□□ -0.39
ECHDC1-209ENST00000454591 ZFYVE28Q9HCC9 887 aa12.59□□□□□ -0.39
ECHDC1-209ENST00000454591 RGS18Q9NS28 235 aa12.59□□□□□ -0.39
ECHDC1-209ENST00000454591 PLK2Q9NYY3 685 aa12.59□□□□□ -0.39
ECHDC1-209ENST00000454591 EIF4E1BA6NMX2 242 aaKnown RBP12.58□□□□□ -0.4
ECHDC1-209ENST00000454591 SYN3O14994 580 aa12.58□□□□□ -0.4
ECHDC1-209ENST00000454591 MAP3K13O43283 966 aa12.58□□□□□ -0.4
ECHDC1-209ENST00000454591 SMIM24O75264 130 aa12.58□□□□□ -0.4
ECHDC1-209ENST00000454591 ATXN1LP0C7T5 689 aaKnown RBP12.58□□□□□ -0.4
ECHDC1-209ENST00000454591 PABPC4LP0CB38 370 aaKnown RBP12.58□□□□□ -0.4
ECHDC1-209ENST00000454591 HLA-DPA1P20036 260 aa12.58□□□□□ -0.4
ECHDC1-209ENST00000454591 OGNP20774 298 aaKnown RBP12.58□□□□□ -0.4
ECHDC1-209ENST00000454591 FDXRP22570 491 aa12.58□□□□□ -0.4
ECHDC1-209ENST00000454591 THPOP40225 353 aa12.58□□□□□ -0.4
ECHDC1-209ENST00000454591 DPP6P42658 865 aa12.58□□□□□ -0.4
ECHDC1-209ENST00000454591 MAPKAPK2P49137 400 aa12.58□□□□□ -0.4
ECHDC1-209ENST00000454591 MRPL19P49406 292 aaKnown RBP12.58□□□□□ -0.4
ECHDC1-209ENST00000454591 NAA20P61599 178 aa12.58□□□□□ -0.4
ECHDC1-209ENST00000454591 RING1Q06587 406 aa12.58□□□□□ -0.4
ECHDC1-209ENST00000454591 ART3Q13508 389 aa12.58□□□□□ -0.4
ECHDC1-209ENST00000454591 LRP8Q14114 963 aa12.58□□□□□ -0.4
ECHDC1-209ENST00000454591 MRPL58Q14197 206 aaKnown RBP12.58□□□□□ -0.4
ECHDC1-209ENST00000454591 PDCD2Q16342 344 aaPredicted RBP12.58□□□□□ -0.4
ECHDC1-209ENST00000454591 USP41Q3LFD5 358 aa12.58□□□□□ -0.4
ECHDC1-209ENST00000454591 TMEM198Q66K66 360 aa12.58□□□□□ -0.4
ECHDC1-209ENST00000454591 UGT2A3Q6UWM9 527 aa12.58□□□□□ -0.4
ECHDC1-209ENST00000454591 MFN1Q8IWA4 741 aa12.58□□□□□ -0.4
ECHDC1-209ENST00000454591 CCNYL1Q8N7R7 359 aa12.58□□□□□ -0.4
ECHDC1-209ENST00000454591 ICA1LQ8NDH6 482 aa12.58□□□□□ -0.4
ECHDC1-209ENST00000454591 HMGCLL1Q8TB92 370 aa12.58□□□□□ -0.4
ECHDC1-209ENST00000454591 AGR3Q8TD06 166 aa12.58□□□□□ -0.4
ECHDC1-209ENST00000454591 ZNF483Q8TF39 744 aaPredicted RBP12.58□□□□□ -0.4
ECHDC1-209ENST00000454591 ASB9Q96DX5 294 aa12.58□□□□□ -0.4
ECHDC1-209ENST00000454591 HMCESQ96FZ2 354 aa12.58□□□□□ -0.4
ECHDC1-209ENST00000454591 GBP5Q96PP8 586 aa12.58□□□□□ -0.4
ECHDC1-209ENST00000454591 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.58□□□□□ -0.4
ECHDC1-209ENST00000454591 Q9H521 79 aa12.58□□□□□ -0.4
ECHDC1-209ENST00000454591 MPP6Q9NZW5 540 aa12.58□□□□□ -0.4
ECHDC1-209ENST00000454591 VWA7Q9Y334 891 aa12.58□□□□□ -0.4
ECHDC1-209ENST00000454591 PCDHGA7Q9Y5G6 932 aa12.58□□□□□ -0.4
ECHDC1-209ENST00000454591 GBF1Q92538 1859 aa12.58□□□□□ -0.4
ECHDC1-209ENST00000454591 TRIM24O15164 1050 aa12.57□□□□□ -0.4
ECHDC1-209ENST00000454591 LDB2O43679 373 aa12.57□□□□□ -0.4
ECHDC1-209ENST00000454591 FGF1P05230 155 aa12.57□□□□□ -0.4
ECHDC1-209ENST00000454591 FGF4P08620 206 aa12.57□□□□□ -0.4
ECHDC1-209ENST00000454591 UBTFL6P0CB48 400 aaPredicted RBP12.57□□□□□ -0.4
ECHDC1-209ENST00000454591 COL6A1P12109 1028 aa12.57□□□□□ -0.4
ECHDC1-209ENST00000454591 CD1EP15812 388 aa12.57□□□□□ -0.4
ECHDC1-209ENST00000454591 SAT1P21673 171 aa12.57□□□□□ -0.4
ECHDC1-209ENST00000454591 PBX3P40426 434 aa12.57□□□□□ -0.4
ECHDC1-209ENST00000454591 CHN2P52757 468 aa12.57□□□□□ -0.4
ECHDC1-209ENST00000454591 HUNKP57058 714 aa12.57□□□□□ -0.4
ECHDC1-209ENST00000454591 MS4A2Q01362 244 aa12.57□□□□□ -0.4
ECHDC1-209ENST00000454591 ROR2Q01974 943 aaKnown RBP12.57□□□□□ -0.4
ECHDC1-209ENST00000454591 SERINC3Q13530 473 aa12.57□□□□□ -0.4
ECHDC1-209ENST00000454591 SEPT6Q14141 434 aa12.57□□□□□ -0.4
ECHDC1-209ENST00000454591 CSHL1Q14406 222 aa12.57□□□□□ -0.4
ECHDC1-209ENST00000454591 IHHQ14623 411 aa12.57□□□□□ -0.4
ECHDC1-209ENST00000454591 PDK3Q15120 406 aa12.57□□□□□ -0.4
ECHDC1-209ENST00000454591 SPATS1Q496A3 300 aa12.57□□□□□ -0.4
ECHDC1-209ENST00000454591 PAN2Q504Q3 1202 aaKnown RBP12.57□□□□□ -0.4
ECHDC1-209ENST00000454591 SLC39A12Q504Y0 691 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms