RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 CDC42EP4Q9H3Q1 356 aaKnown RBP11.07□□□□□ -0.64
SCN9A-205ENST00000454569 ARNT2Q9HBZ2 717 aa11.07□□□□□ -0.64
SCN9A-205ENST00000454569 VPS45Q9NRW7 570 aa11.07□□□□□ -0.64
SCN9A-205ENST00000454569 ZNF446Q9NWS9 450 aa11.07□□□□□ -0.64
SCN9A-205ENST00000454569 NINJ2Q9NZG7 142 aa11.07□□□□□ -0.64
SCN9A-205ENST00000454569 CHMP2BQ9UQN3 213 aa11.07□□□□□ -0.64
SCN9A-205ENST00000454569 KCTD3Q9Y597 815 aa11.07□□□□□ -0.64
SCN9A-205ENST00000454569 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.07□□□□□ -0.64
SCN9A-205ENST00000454569 PLXNB3Q9ULL4 1909 aa11.06□□□□□ -0.64
SCN9A-205ENST00000454569 ERI2A8K979 691 aaKnown RBP11.06□□□□□ -0.64
SCN9A-205ENST00000454569 A8MX80 341 aa11.06□□□□□ -0.64
SCN9A-205ENST00000454569 PSMD3O43242 534 aa11.06□□□□□ -0.64
SCN9A-205ENST00000454569 BUD23O43709 281 aaKnown RBP11.06□□□□□ -0.64
SCN9A-205ENST00000454569 RNF40O75150 1001 aa11.06□□□□□ -0.64
SCN9A-205ENST00000454569 PIAS1O75925 651 aa11.06□□□□□ -0.64
SCN9A-205ENST00000454569 KLF8O95600 359 aaPredicted RBP11.06□□□□□ -0.64
SCN9A-205ENST00000454569 POP4O95707 220 aaKnown RBP11.06□□□□□ -0.64
SCN9A-205ENST00000454569 TARSP26639 723 aaKnown RBP11.06□□□□□ -0.64
SCN9A-205ENST00000454569 NNMTP40261 264 aa11.06□□□□□ -0.64
SCN9A-205ENST00000454569 ARL4CP56559 192 aa11.06□□□□□ -0.64
SCN9A-205ENST00000454569 AP1S1P61966 158 aa11.06□□□□□ -0.64
SCN9A-205ENST00000454569 BCL2L1Q07817 233 aa11.06□□□□□ -0.64
SCN9A-205ENST00000454569 CBLBQ13191 982 aa11.06□□□□□ -0.64
SCN9A-205ENST00000454569 POU6F1Q14863 301 aa11.06□□□□□ -0.64
SCN9A-205ENST00000454569 SMAD1Q15797 465 aaKnown RBP11.06□□□□□ -0.64
SCN9A-205ENST00000454569 NAPEPLDQ6IQ20 393 aa11.06□□□□□ -0.64
SCN9A-205ENST00000454569 ZBED8Q8IZ13 594 aa11.06□□□□□ -0.64
SCN9A-205ENST00000454569 CHPFQ8IZ52 775 aa11.06□□□□□ -0.64
SCN9A-205ENST00000454569 DNAAF3Q8N9W5 541 aa11.06□□□□□ -0.64
SCN9A-205ENST00000454569 KDM1BQ8NB78 822 aa11.06□□□□□ -0.64
SCN9A-205ENST00000454569 TXNDC5Q8NBS9 432 aaKnown RBP11.06□□□□□ -0.64
SCN9A-205ENST00000454569 FBXO36Q8NEA4 188 aa11.06□□□□□ -0.64
SCN9A-205ENST00000454569 LPCAT1Q8NF37 534 aa11.06□□□□□ -0.64
SCN9A-205ENST00000454569 MDGA1Q8NFP4 955 aa11.06□□□□□ -0.64
SCN9A-205ENST00000454569 UCMAQ8WVF2 138 aa11.06□□□□□ -0.64
SCN9A-205ENST00000454569 CAVIN3Q969G5 261 aa11.06□□□□□ -0.64
SCN9A-205ENST00000454569 ARRDC3Q96B67 414 aa11.06□□□□□ -0.64
SCN9A-205ENST00000454569 FCRL3Q96P31 734 aaPredicted RBP11.06□□□□□ -0.64
SCN9A-205ENST00000454569 HEPHQ9BQS7 1158 aa11.06□□□□□ -0.64
SCN9A-205ENST00000454569 CPEB1Q9BZB8 566 aaKnown RBP11.06□□□□□ -0.64
SCN9A-205ENST00000454569 FOXQ1Q9C009 403 aa11.06□□□□□ -0.64
SCN9A-205ENST00000454569 SUV39H2Q9H5I1 410 aa11.06□□□□□ -0.64
SCN9A-205ENST00000454569 CD248Q9HCU0 757 aa11.06□□□□□ -0.64
SCN9A-205ENST00000454569 CHRAC1Q9NRG0 131 aa11.06□□□□□ -0.64
SCN9A-205ENST00000454569 MTRF1LQ9UGC7 380 aaKnown RBP11.06□□□□□ -0.64
SCN9A-205ENST00000454569 TRPM6Q9BX84 2022 aa11.06□□□□□ -0.64
SCN9A-205ENST00000454569 ZNF106Q9H2Y7 1883 aaKnown RBP11.05□□□□□ -0.64
SCN9A-205ENST00000454569 EML5Q05BV3 1969 aa11.05□□□□□ -0.64
SCN9A-205ENST00000454569 EDDM13A0A1B0GTR0 161 aa11.05□□□□□ -0.64
SCN9A-205ENST00000454569 A0A1W2PQF6 199 aa11.05□□□□□ -0.64
SCN9A-205ENST00000454569 PGLSO95336 258 aa11.05□□□□□ -0.64
SCN9A-205ENST00000454569 NDST3O95803 873 aa11.05□□□□□ -0.64
SCN9A-205ENST00000454569 CHRNB1P11230 501 aa11.05□□□□□ -0.64
SCN9A-205ENST00000454569 MLNP12872 115 aa11.05□□□□□ -0.64
SCN9A-205ENST00000454569 GLULP15104 373 aa11.05□□□□□ -0.64
SCN9A-205ENST00000454569 DRD1P21728 446 aa11.05□□□□□ -0.64
SCN9A-205ENST00000454569 CES1P23141 567 aa11.05□□□□□ -0.64
SCN9A-205ENST00000454569 SSTR1P30872 391 aa11.05□□□□□ -0.64
SCN9A-205ENST00000454569 EMP3P54852 163 aa11.05□□□□□ -0.64
SCN9A-205ENST00000454569 GRSF1Q12849 480 aaKnown RBP eCLIP11.05□□□□□ -0.64
SCN9A-205ENST00000454569 CDH17Q12864 832 aa11.05□□□□□ -0.64
SCN9A-205ENST00000454569 GAS6Q14393 721 aa11.05□□□□□ -0.64
SCN9A-205ENST00000454569 SLC14A2Q15849 920 aa11.05□□□□□ -0.64
SCN9A-205ENST00000454569 GDPD4Q6W3E5 623 aa11.05□□□□□ -0.64
SCN9A-205ENST00000454569 CENPUQ71F23 418 aa11.05□□□□□ -0.64
SCN9A-205ENST00000454569 MTERF4Q7Z6M4 381 aaKnown RBP11.05□□□□□ -0.64
SCN9A-205ENST00000454569 CACUL1Q86Y37 369 aa11.05□□□□□ -0.64
SCN9A-205ENST00000454569 SUGP1Q8IWZ8 645 aaKnown RBP11.05□□□□□ -0.64
SCN9A-205ENST00000454569 PDIK1LQ8N165 341 aa11.05□□□□□ -0.64
SCN9A-205ENST00000454569 PNPLA1Q8N8W4 532 aa11.05□□□□□ -0.64
SCN9A-205ENST00000454569 RPLP0P6Q8NHW5 317 aa11.05□□□□□ -0.64
SCN9A-205ENST00000454569 EID2BQ96D98 161 aa11.05□□□□□ -0.64
SCN9A-205ENST00000454569 ECHDC3Q96DC8 303 aa11.05□□□□□ -0.64
SCN9A-205ENST00000454569 IFT43Q96FT9 208 aa11.05□□□□□ -0.64
SCN9A-205ENST00000454569 XAB2Q9HCS7 855 aaKnown RBP11.05□□□□□ -0.64
SCN9A-205ENST00000454569 ARHGEF3Q9NR81 526 aa11.05□□□□□ -0.64
SCN9A-205ENST00000454569 PLSCR2Q9NRY7 297 aa11.05□□□□□ -0.64
SCN9A-205ENST00000454569 IL1RAPL1Q9NZN1 696 aa11.05□□□□□ -0.64
SCN9A-205ENST00000454569 SLC2A6Q9UGQ3 507 aa11.05□□□□□ -0.64
SCN9A-205ENST00000454569 IL36AQ9UHA7 158 aa11.05□□□□□ -0.64
SCN9A-205ENST00000454569 PPM1HQ9ULR3 514 aa11.05□□□□□ -0.64
SCN9A-205ENST00000454569 CACNA1IQ9P0X4 2223 aa11.05□□□□□ -0.64
SCN9A-205ENST00000454569 ANKRD66B4E2M5 251 aa11.04□□□□□ -0.64
SCN9A-205ENST00000454569 CCL22O00626 93 aa11.04□□□□□ -0.64
SCN9A-205ENST00000454569 EPOP01588 193 aa11.04□□□□□ -0.64
SCN9A-205ENST00000454569 F7P08709 466 aaPredicted RBP11.04□□□□□ -0.64
SCN9A-205ENST00000454569 TIMP2P16035 220 aa11.04□□□□□ -0.64
SCN9A-205ENST00000454569 NMBRP28336 390 aa11.04□□□□□ -0.64
SCN9A-205ENST00000454569 HSD17B3P37058 310 aa11.04□□□□□ -0.64
SCN9A-205ENST00000454569 ABL2P42684 1182 aa11.04□□□□□ -0.64
SCN9A-205ENST00000454569 TNNT3P45378 269 aaPredicted RBP11.04□□□□□ -0.64
SCN9A-205ENST00000454569 COPAP53621 1224 aa11.04□□□□□ -0.64
SCN9A-205ENST00000454569 PMS2P54278 862 aa11.04□□□□□ -0.64
SCN9A-205ENST00000454569 GLIPR1L2Q4G1C9 344 aa11.04□□□□□ -0.64
SCN9A-205ENST00000454569 RALGPS1Q5JS13 557 aa11.04□□□□□ -0.64
SCN9A-205ENST00000454569 EMBQ6PCB8 327 aa11.04□□□□□ -0.64
SCN9A-205ENST00000454569 LINC00523Q86TU6 105 aa11.04□□□□□ -0.64
SCN9A-205ENST00000454569 MMAAQ8IVH4 418 aaKnown RBP11.04□□□□□ -0.64
SCN9A-205ENST00000454569 GJD3Q8N144 294 aa11.04□□□□□ -0.64
SCN9A-205ENST00000454569 SIX5Q8N196 739 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms