RNA–Protein interactions for RNA: ENST00000454498.6

CSGALNACT1-203, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 4,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-203ENST00000454498 FGBP02675 491 aa10.1□□□□□ -0.79
CSGALNACT1-203ENST00000454498 INSCQ1MX18 579 aa10.1□□□□□ -0.79
CSGALNACT1-203ENST00000454498 MAMDC4Q6UXC1 1216 aa10.1□□□□□ -0.79
CSGALNACT1-203ENST00000454498 PATL1Q86TB9 770 aaKnown RBP10.1□□□□□ -0.79
CSGALNACT1-203ENST00000454498 DHFR2Q86XF0 187 aa10.1□□□□□ -0.79
CSGALNACT1-203ENST00000454498 ARL14EPQ8N8R7 260 aaPredicted RBP10.1□□□□□ -0.79
CSGALNACT1-203ENST00000454498 CSGALNACT1Q8TDX6 532 aa10.1□□□□□ -0.79
CSGALNACT1-203ENST00000454498 LGALS13Q9UHV8 139 aa10.1□□□□□ -0.79
CSGALNACT1-203ENST00000454498 EVLQ9UI08 416 aaPredicted RBP10.1□□□□□ -0.79
CSGALNACT1-203ENST00000454498 ZNF180Q9UJW8 692 aa10.1□□□□□ -0.79
CSGALNACT1-203ENST00000454498 IGKV6D-21A0A0A0MT36 114 aa10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 NEDD8-MDP1E9PL57 170 aa10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 USP1O94782 785 aa10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 MLYCDO95822 493 aa10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 ATP6V1B2P21281 511 aa10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 CHI3L1P36222 383 aaPredicted RBP10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 ALDH9A1P49189 494 aa10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 LIMK2P53671 638 aa10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 SLC34A1Q06495 639 aa10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 MPPE1Q53F39 396 aa10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 SCIMPQ6UWF3 145 aa10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 LDB1Q86U70 411 aaPredicted RBP10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 TDRPQ86YL5 185 aa10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 RBFAQ8N0V3 343 aa10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 ZNF786Q8N393 782 aa10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 PTCD2Q8WV60 388 aaKnown RBP10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 THAP11Q96EK4 314 aa10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 SLC39A8Q9C0K1 460 aa10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 PNPOQ9NVS9 261 aa10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 ZNF510Q9Y2H8 683 aa10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 CPQQ9Y646 472 aa10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 ITGB4P16144 1822 aa10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 IGKV6-21A0A0C4DH24 114 aa10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 FFAR3O14843 346 aa10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 GPR42O15529 346 aa10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 UGT2B4P06133 528 aa10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 LRPAP1P30533 357 aa10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 S100A3P33764 101 aa10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 GJA9P57773 515 aa10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 ELF3P78545 371 aaPredicted RBP10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 GRM3Q14832 879 aa10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 FAM182AQ5T1J6 154 aa10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 GLIS1Q8NBF1 620 aa10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 LINGO1Q96FE5 620 aa10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 MYO19Q96H55 970 aa10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 HAPLN3Q96S86 360 aa10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 SEZ6LQ9BYH1 1024 aa10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 STN1Q9H668 368 aaKnown RBP10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 ZFYVE1Q9HBF4 777 aa10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 IGSF9Q9P2J2 1179 aa10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 MSRAQ9UJ68 235 aa10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 GABRQQ9UN88 632 aa10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 C15orf38-AP3S2A0A0A6YYH1 394 aa10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 ULK1O75385 1050 aa10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 HGFP14210 728 aa10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 PKMP14618 531 aaKnown RBP10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 PSMC3P17980 439 aa10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 IGFBP4P22692 258 aa10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 FASP25445 335 aa10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 MAPKAPK2P49137 400 aa10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 TMED1Q13445 227 aa10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 SEMA5AQ13591 1074 aa10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 PRMT9Q6P2P2 845 aa10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 CNSTQ6PJW8 725 aa10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 ARPINQ7Z6K5 226 aa10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 PIK3R5Q8WYR1 880 aa10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 PLEKHA8Q96JA3 519 aa10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 IMPAD1Q9NX62 359 aa10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 COPG2Q9UBF2 871 aa10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 PACSIN3Q9UKS6 424 aa10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 PADI4Q9UM07 663 aa10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 TCAF1Q9Y4C2 921 aa10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 SPACA6W5XKT8 324 aa10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 MAGEA13PA6NCF6 341 aa10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 SLC38A8A6NNN8 435 aa10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 C1QTNF3-AMACRE9PGA6 284 aa10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 RPP40O75818 363 aaKnown RBP10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 GPR1P46091 355 aa10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 ANXA11P50995 505 aaKnown RBP10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 NEK3P51956 506 aa10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 NDST2P52849 883 aa10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 CDH4P55283 916 aa10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 MPP1Q00013 466 aa10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 SLC25A11Q02978 314 aaKnown RBP10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 RAET1GQ6H3X3 334 aa10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 KIAA0408Q6ZU52 694 aa10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 CHPFQ8IZ52 775 aa10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 KCTD13Q8WZ19 329 aa10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 SMG7Q92540 1137 aaKnown RBP10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 TRMOQ9BU70 441 aa10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 KLHL4Q9C0H6 718 aa10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 TLE6Q9H808 572 aa10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 CAPN10Q9HC96 672 aa10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 ZFP37Q9Y6Q3 630 aaPredicted RBP10.09□□□□□ -0.79
CSGALNACT1-203ENST00000454498 RGSL1A5PLK6 1076 aa10.08□□□□□ -0.8
CSGALNACT1-203ENST00000454498 GNRH1P01148 92 aa10.08□□□□□ -0.8
CSGALNACT1-203ENST00000454498 RPN2P04844 631 aa10.08□□□□□ -0.8
CSGALNACT1-203ENST00000454498 SERPINA6P08185 405 aa10.08□□□□□ -0.8
CSGALNACT1-203ENST00000454498 COL6A2P12110 1019 aa10.08□□□□□ -0.8
CSGALNACT1-203ENST00000454498 FCGR1AP12314 374 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms