RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 MED22Q15528 200 aa4.61□□□□□ -1.67
LINC00393-202ENST00000452852 ST3GAL2Q16842 350 aa4.61□□□□□ -1.67
LINC00393-202ENST00000452852 FAM187BQ17R55 369 aa4.61□□□□□ -1.67
LINC00393-202ENST00000452852 CCDC57Q2TAC2 916 aa4.61□□□□□ -1.67
LINC00393-202ENST00000452852 AARS2Q5JTZ9 985 aaKnown RBP4.61□□□□□ -1.67
LINC00393-202ENST00000452852 SH2D4BQ5SQS7 431 aa4.61□□□□□ -1.67
LINC00393-202ENST00000452852 CEP85Q6P2H3 762 aa4.61□□□□□ -1.67
LINC00393-202ENST00000452852 ACSM6Q6P461 480 aa4.61□□□□□ -1.67
LINC00393-202ENST00000452852 ANKRD16Q6P6B7 361 aa4.61□□□□□ -1.67
LINC00393-202ENST00000452852 INO80CQ6PI98 192 aaPredicted RBP4.61□□□□□ -1.67
LINC00393-202ENST00000452852 DLK2Q6UY11 383 aa4.61□□□□□ -1.67
LINC00393-202ENST00000452852 G2E3Q7L622 706 aa4.61□□□□□ -1.67
LINC00393-202ENST00000452852 ARMC9Q7Z3E5 817 aa4.61□□□□□ -1.67
LINC00393-202ENST00000452852 SZRD1Q7Z422 152 aa4.61□□□□□ -1.67
LINC00393-202ENST00000452852 ZNF804AQ7Z570 1209 aa4.61□□□□□ -1.67
LINC00393-202ENST00000452852 WDR53Q7Z5U6 358 aaPredicted RBP4.61□□□□□ -1.67
LINC00393-202ENST00000452852 WDR63Q8IWG1 891 aa4.61□□□□□ -1.67
LINC00393-202ENST00000452852 ZNF366Q8N895 744 aa4.61□□□□□ -1.67
LINC00393-202ENST00000452852 MAFAQ8NHW3 353 aaPredicted RBP4.61□□□□□ -1.67
LINC00393-202ENST00000452852 TBC1D5Q92609 795 aa4.61□□□□□ -1.67
LINC00393-202ENST00000452852 SH3KBP1Q96B97 665 aa4.61□□□□□ -1.67
LINC00393-202ENST00000452852 CTHRC1Q96CG8 243 aa4.61□□□□□ -1.67
LINC00393-202ENST00000452852 CALML4Q96GE6 196 aa4.61□□□□□ -1.67
LINC00393-202ENST00000452852 RADILQ96JH8 1075 aa4.61□□□□□ -1.67
LINC00393-202ENST00000452852 NR1H4Q96RI1 486 aaPredicted RBP4.61□□□□□ -1.67
LINC00393-202ENST00000452852 PRR25Q96S07 402 aa4.61□□□□□ -1.67
LINC00393-202ENST00000452852 CD180Q99467 661 aa4.61□□□□□ -1.67
LINC00393-202ENST00000452852 CLSTN3Q9BQT9 956 aa4.61□□□□□ -1.67
LINC00393-202ENST00000452852 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.61□□□□□ -1.67
LINC00393-202ENST00000452852 RANBP17Q9H2T7 1088 aaKnown RBP4.61□□□□□ -1.67
LINC00393-202ENST00000452852 TRIM36Q9NQ86 728 aa4.61□□□□□ -1.67
LINC00393-202ENST00000452852 SH3GLB2Q9NR46 395 aa4.61□□□□□ -1.67
LINC00393-202ENST00000452852 MRGBPQ9NV56 204 aa4.61□□□□□ -1.67
LINC00393-202ENST00000452852 RNF186Q9NXI6 227 aa4.61□□□□□ -1.67
LINC00393-202ENST00000452852 SERGEFQ9UGK8 458 aa4.61□□□□□ -1.67
LINC00393-202ENST00000452852 CORO1CQ9ULV4 474 aaPredicted RBP4.61□□□□□ -1.67
LINC00393-202ENST00000452852 FRMD4BQ9Y2L6 1034 aa4.61□□□□□ -1.67
LINC00393-202ENST00000452852 COPG1Q9Y678 874 aaKnown RBP4.61□□□□□ -1.67
LINC00393-202ENST00000452852 ASTN2O75129 1339 aaPredicted RBP4.61□□□□□ -1.67
LINC00393-202ENST00000452852 BRCA2P51587 3418 aa4.61□□□□□ -1.67
LINC00393-202ENST00000452852 COL1A1P02452 1464 aaPredicted RBP4.61□□□□□ -1.67
LINC00393-202ENST00000452852 AK9Q5TCS8 1911 aa4.6□□□□□ -1.67
LINC00393-202ENST00000452852 AGAP14A8MT82 685 aa4.6□□□□□ -1.67
LINC00393-202ENST00000452852 A8MVJ9 347 aa4.6□□□□□ -1.67
LINC00393-202ENST00000452852 TARM1B6A8C7 271 aa4.6□□□□□ -1.67
LINC00393-202ENST00000452852 UBE2Q2LH0YL09 131 aa4.6□□□□□ -1.67
LINC00393-202ENST00000452852 CES2O00748 559 aa4.6□□□□□ -1.67
LINC00393-202ENST00000452852 ADRB2P07550 413 aa4.6□□□□□ -1.67
LINC00393-202ENST00000452852 TNNT1P13805 278 aa4.6□□□□□ -1.67
LINC00393-202ENST00000452852 CD72P21854 359 aa4.6□□□□□ -1.67
LINC00393-202ENST00000452852 ADRA1DP25100 572 aa4.6□□□□□ -1.67
LINC00393-202ENST00000452852 RARSP54136 660 aaKnown RBP4.6□□□□□ -1.67
LINC00393-202ENST00000452852 UFM1P61960 85 aa4.6□□□□□ -1.67
LINC00393-202ENST00000452852 ARHGAP8P85298 464 aa4.6□□□□□ -1.67
LINC00393-202ENST00000452852 TFF2Q03403 129 aa4.6□□□□□ -1.67
LINC00393-202ENST00000452852 SREBF2Q12772 1141 aa4.6□□□□□ -1.67
LINC00393-202ENST00000452852 DNASE1L3Q13609 305 aa4.6□□□□□ -1.67
LINC00393-202ENST00000452852 ACVR2BQ13705 512 aa4.6□□□□□ -1.67
LINC00393-202ENST00000452852 CYP1B1Q16678 543 aa4.6□□□□□ -1.67
LINC00393-202ENST00000452852 DUSP28Q4G0W2 176 aa4.6□□□□□ -1.67
LINC00393-202ENST00000452852 SLC9B1Q4ZJI4 515 aa4.6□□□□□ -1.67
LINC00393-202ENST00000452852 PCID2Q5JVF3 399 aa4.6□□□□□ -1.67
LINC00393-202ENST00000452852 WDR93Q6P2C0 686 aa4.6□□□□□ -1.67
LINC00393-202ENST00000452852 MTHFD1LQ6UB35 978 aa4.6□□□□□ -1.67
LINC00393-202ENST00000452852 PARS2Q7L3T8 475 aaKnown RBP4.6□□□□□ -1.67
LINC00393-202ENST00000452852 SLC29A4Q7RTT9 530 aa4.6□□□□□ -1.67
LINC00393-202ENST00000452852 C17orf53Q8N3J3 647 aaPredicted RBP4.6□□□□□ -1.67
LINC00393-202ENST00000452852 SRBD1Q8N5C6 995 aaKnown RBP4.6□□□□□ -1.67
LINC00393-202ENST00000452852 WDTC1Q8N5D0 677 aa4.6□□□□□ -1.67
LINC00393-202ENST00000452852 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.6□□□□□ -1.67
LINC00393-202ENST00000452852 HASPINQ8TF76 798 aa4.6□□□□□ -1.67
LINC00393-202ENST00000452852 DPF1Q92782 380 aa4.6□□□□□ -1.67
LINC00393-202ENST00000452852 REPS1Q96D71 796 aa4.6□□□□□ -1.67
LINC00393-202ENST00000452852 FAM120BQ96EK7 910 aaKnown RBP4.6□□□□□ -1.67
LINC00393-202ENST00000452852 PIP5K1AQ99755 562 aa4.6□□□□□ -1.67
LINC00393-202ENST00000452852 HDHD5Q9BXW7 423 aa4.6□□□□□ -1.67
LINC00393-202ENST00000452852 RXFP3Q9NSD7 469 aa4.6□□□□□ -1.67
LINC00393-202ENST00000452852 BEX4Q9NWD9 120 aaPredicted RBP4.6□□□□□ -1.67
LINC00393-202ENST00000452852 PPP1R14DQ9NXH3 145 aa4.6□□□□□ -1.67
LINC00393-202ENST00000452852 MTMR4Q9NYA4 1195 aa4.6□□□□□ -1.67
LINC00393-202ENST00000452852 KCND2Q9NZV8 630 aa4.6□□□□□ -1.67
LINC00393-202ENST00000452852 SH3BP4Q9P0V3 963 aa4.6□□□□□ -1.67
LINC00393-202ENST00000452852 MGAT4CQ9UBM8 478 aa4.6□□□□□ -1.67
LINC00393-202ENST00000452852 KLQ9UEF7 1012 aa4.6□□□□□ -1.67
LINC00393-202ENST00000452852 CD207Q9UJ71 328 aa4.6□□□□□ -1.67
LINC00393-202ENST00000452852 SNX8Q9Y5X2 465 aa4.6□□□□□ -1.67
LINC00393-202ENST00000452852 MKI67P46013 3256 aaKnown RBP4.6□□□□□ -1.67
LINC00393-202ENST00000452852 PABPN1LA6NDY0 278 aaKnown RBP4.59□□□□□ -1.67
LINC00393-202ENST00000452852 WIPF3A6NGB9 483 aa4.59□□□□□ -1.67
LINC00393-202ENST00000452852 NPIPB13A6NJU9 1138 aa4.59□□□□□ -1.67
LINC00393-202ENST00000452852 NPIPB5A8MRT5 1133 aa4.59□□□□□ -1.67
LINC00393-202ENST00000452852 NPIPB4C9JG80 1138 aa4.59□□□□□ -1.67
LINC00393-202ENST00000452852 DKC1O60832 514 aaKnown RBP eCLIP4.59□□□□□ -1.67
LINC00393-202ENST00000452852 BEST1O76090 585 aa4.59□□□□□ -1.67
LINC00393-202ENST00000452852 JTBO76095 146 aa4.59□□□□□ -1.67
LINC00393-202ENST00000452852 CSH1P0DML2 217 aa4.59□□□□□ -1.67
LINC00393-202ENST00000452852 CSH2P0DML3 217 aa4.59□□□□□ -1.67
LINC00393-202ENST00000452852 RARGP13631 454 aa4.59□□□□□ -1.67
LINC00393-202ENST00000452852 PSMA4P25789 261 aaKnown RBP4.59□□□□□ -1.67
LINC00393-202ENST00000452852 HNF1BP35680 557 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms