RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 KCNK1O00180 336 aa20.11■□□□□ 0.81
COL9A3-202ENST00000452372 DDX3YO15523 660 aaKnown RBP20.11■□□□□ 0.81
COL9A3-202ENST00000452372 SPINT1O43278 529 aa20.11■□□□□ 0.81
COL9A3-202ENST00000452372 SOCS5O75159 536 aa20.11■□□□□ 0.81
COL9A3-202ENST00000452372 JCHAINP01591 159 aa20.11■□□□□ 0.81
COL9A3-202ENST00000452372 SYPP08247 313 aa20.11■□□□□ 0.81
COL9A3-202ENST00000452372 PECAM1P16284 738 aaPredicted RBP20.11■□□□□ 0.81
COL9A3-202ENST00000452372 CES1P23141 567 aa20.11■□□□□ 0.81
COL9A3-202ENST00000452372 ATXN3P54252 364 aaPredicted RBP20.11■□□□□ 0.81
COL9A3-202ENST00000452372 POLR2LP62875 67 aaKnown RBP20.11■□□□□ 0.81
COL9A3-202ENST00000452372 RPS21P63220 83 aaKnown RBP20.11■□□□□ 0.81
COL9A3-202ENST00000452372 IFI35P80217 286 aaPredicted RBP20.11■□□□□ 0.81
COL9A3-202ENST00000452372 ITKQ08881 620 aa20.11■□□□□ 0.81
COL9A3-202ENST00000452372 ZNF284Q2VY69 593 aa20.11■□□□□ 0.81
COL9A3-202ENST00000452372 TMEM259Q4ZIN3 620 aa20.11■□□□□ 0.81
COL9A3-202ENST00000452372 CFAP58Q5T655 872 aa20.11■□□□□ 0.81
COL9A3-202ENST00000452372 KIAA1161Q6NSJ0 714 aa20.11■□□□□ 0.81
COL9A3-202ENST00000452372 ZSCAN30Q86W11 494 aa20.11■□□□□ 0.81
COL9A3-202ENST00000452372 SPOCK2Q92563 424 aa20.11■□□□□ 0.81
COL9A3-202ENST00000452372 IL12RB2Q99665 862 aa20.11■□□□□ 0.81
COL9A3-202ENST00000452372 SEMA3CQ99985 751 aa20.11■□□□□ 0.81
COL9A3-202ENST00000452372 HERPUD2Q9BSE4 406 aa20.11■□□□□ 0.81
COL9A3-202ENST00000452372 SLC32A1Q9H598 525 aa20.11■□□□□ 0.81
COL9A3-202ENST00000452372 ATP8A1Q9Y2Q0 1164 aa20.11■□□□□ 0.81
COL9A3-202ENST00000452372 PCDHGC4Q9Y5F7 938 aa20.11■□□□□ 0.81
COL9A3-202ENST00000452372 DMXL2Q8TDJ6 3036 aa20.11■□□□□ 0.81
COL9A3-202ENST00000452372 A0A1W2PQ67 120 aa20.1■□□□□ 0.81
COL9A3-202ENST00000452372 APOC4-APOC2K7ER74 178 aa20.1■□□□□ 0.81
COL9A3-202ENST00000452372 NEMP1O14524 444 aa20.1■□□□□ 0.81
COL9A3-202ENST00000452372 HTRA2O43464 458 aaPredicted RBP20.1■□□□□ 0.81
COL9A3-202ENST00000452372 NEBLO76041 1014 aa20.1■□□□□ 0.81
COL9A3-202ENST00000452372 APOC2P02655 101 aa20.1■□□□□ 0.81
COL9A3-202ENST00000452372 XPAP23025 273 aaPredicted RBP20.1■□□□□ 0.81
COL9A3-202ENST00000452372 GRIA4P48058 902 aa20.1■□□□□ 0.81
COL9A3-202ENST00000452372 CSNK1EP49674 416 aaKnown RBP20.1■□□□□ 0.81
COL9A3-202ENST00000452372 SIM1P81133 766 aaPredicted RBP20.1■□□□□ 0.81
COL9A3-202ENST00000452372 TEAD4Q15561 434 aa20.1■□□□□ 0.81
COL9A3-202ENST00000452372 SEL1L3Q68CR1 1132 aa20.1■□□□□ 0.81
COL9A3-202ENST00000452372 NAPEPLDQ6IQ20 393 aa20.1■□□□□ 0.81
COL9A3-202ENST00000452372 ZSWIM9Q86XI8 627 aa20.1■□□□□ 0.81
COL9A3-202ENST00000452372 GATA6Q92908 595 aa20.1■□□□□ 0.81
COL9A3-202ENST00000452372 SERAC1Q96JX3 654 aa20.1■□□□□ 0.81
COL9A3-202ENST00000452372 SLC6A18Q96N87 628 aa20.1■□□□□ 0.81
COL9A3-202ENST00000452372 CAMK1GQ96NX5 476 aa20.1■□□□□ 0.81
COL9A3-202ENST00000452372 GGT7Q9UJ14 662 aa20.1■□□□□ 0.81
COL9A3-202ENST00000452372 HLA-DQB2P05538 268 aa20.09■□□□□ 0.81
COL9A3-202ENST00000452372 ITIH2P19823 946 aa20.09■□□□□ 0.81
COL9A3-202ENST00000452372 ELP6Q0PNE2 266 aa20.09■□□□□ 0.81
COL9A3-202ENST00000452372 GRIK2Q13002 908 aa20.09■□□□□ 0.81
COL9A3-202ENST00000452372 ZBTB17Q13105 803 aa20.09■□□□□ 0.81
COL9A3-202ENST00000452372 SLC14A1Q13336 389 aa20.09■□□□□ 0.81
COL9A3-202ENST00000452372 PRKD1Q15139 912 aaPredicted RBP20.09■□□□□ 0.81
COL9A3-202ENST00000452372 TMEM52BQ4KMG9 183 aa20.09■□□□□ 0.81
COL9A3-202ENST00000452372 LRRC73Q5JTD7 316 aa20.09■□□□□ 0.81
COL9A3-202ENST00000452372 AADACL2Q6P093 401 aa20.09■□□□□ 0.81
COL9A3-202ENST00000452372 CNTD1Q8N815 330 aa20.09■□□□□ 0.81
COL9A3-202ENST00000452372 TFB1MQ8WVM0 346 aaKnown RBP20.09■□□□□ 0.81
COL9A3-202ENST00000452372 KLK6Q92876 244 aa20.09■□□□□ 0.81
COL9A3-202ENST00000452372 C1QTNF2Q9BXJ5 285 aa20.09■□□□□ 0.81
COL9A3-202ENST00000452372 SLC17A9Q9BYT1 436 aa20.09■□□□□ 0.81
COL9A3-202ENST00000452372 ZDHHC5Q9C0B5 715 aa20.09■□□□□ 0.81
COL9A3-202ENST00000452372 PCDH12Q9NPG4 1184 aa20.09■□□□□ 0.81
COL9A3-202ENST00000452372 ITM2BQ9Y287 266 aa20.09■□□□□ 0.81
COL9A3-202ENST00000452372 PRAMEF26H0Y7S4 382 aa20.08■□□□□ 0.81
COL9A3-202ENST00000452372 RIOK3O14730 519 aaKnown RBP20.08■□□□□ 0.81
COL9A3-202ENST00000452372 WNT9AO14904 365 aa20.08■□□□□ 0.81
COL9A3-202ENST00000452372 SLC31A1O15431 190 aa20.08■□□□□ 0.81
COL9A3-202ENST00000452372 HYAL3O43820 417 aaPredicted RBP20.08■□□□□ 0.81
COL9A3-202ENST00000452372 SH3BP5O60239 455 aa20.08■□□□□ 0.81
COL9A3-202ENST00000452372 TJP3O95049 919 aa20.08■□□□□ 0.81
COL9A3-202ENST00000452372 PTMAP06454 111 aaKnown RBP20.08■□□□□ 0.81
COL9A3-202ENST00000452372 CD38P28907 300 aa20.08■□□□□ 0.81
COL9A3-202ENST00000452372 TRAF2Q12933 501 aa20.08■□□□□ 0.81
COL9A3-202ENST00000452372 CCDC181Q5TID7 509 aa20.08■□□□□ 0.81
COL9A3-202ENST00000452372 ERAP2Q6P179 960 aa20.08■□□□□ 0.81
COL9A3-202ENST00000452372 UNQ6494/PRO21346Q6UXR6 183 aa20.08■□□□□ 0.81
COL9A3-202ENST00000452372 B4GALNT4Q76KP1 1039 aa20.08■□□□□ 0.81
COL9A3-202ENST00000452372 PAF1Q8N7H5 531 aa20.08■□□□□ 0.81
COL9A3-202ENST00000452372 KDF1Q8NAX2 398 aaPredicted RBP20.08■□□□□ 0.81
COL9A3-202ENST00000452372 ARRDC2Q8TBH0 407 aa20.08■□□□□ 0.81
COL9A3-202ENST00000452372 ASB12Q8WXK4 309 aa20.08■□□□□ 0.81
COL9A3-202ENST00000452372 HAUS1Q96CS2 278 aa20.08■□□□□ 0.81
COL9A3-202ENST00000452372 KCNF1Q9H3M0 494 aa20.08■□□□□ 0.81
COL9A3-202ENST00000452372 IL21RQ9HBE5 538 aa20.08■□□□□ 0.81
COL9A3-202ENST00000452372 AASDHPPTQ9NRN7 309 aa20.08■□□□□ 0.81
COL9A3-202ENST00000452372 TTLL3Q9Y4R7 772 aa20.08■□□□□ 0.81
COL9A3-202ENST00000452372 A0A1B0GVT2 93 aa20.07■□□□□ 0.8
COL9A3-202ENST00000452372 A0A1W2PR77 199 aa20.07■□□□□ 0.8
COL9A3-202ENST00000452372 IGLON5A6NGN9 336 aa20.07■□□□□ 0.8
COL9A3-202ENST00000452372 HACD1B0YJ81 288 aa20.07■□□□□ 0.8
COL9A3-202ENST00000452372 VILLO15195 856 aa20.07■□□□□ 0.8
COL9A3-202ENST00000452372 PAK4O96013 591 aaPredicted RBP20.07■□□□□ 0.8
COL9A3-202ENST00000452372 PRLRP16471 622 aa20.07■□□□□ 0.8
COL9A3-202ENST00000452372 DSC2Q02487 901 aa20.07■□□□□ 0.8
COL9A3-202ENST00000452372 NIPAL4Q0D2K0 466 aa20.07■□□□□ 0.8
COL9A3-202ENST00000452372 ZNF211Q13398 564 aaPredicted RBP20.07■□□□□ 0.8
COL9A3-202ENST00000452372 XRCC4Q13426 336 aa20.07■□□□□ 0.8
COL9A3-202ENST00000452372 FGL2Q14314 439 aa20.07■□□□□ 0.8
COL9A3-202ENST00000452372 IHHQ14623 411 aa20.07■□□□□ 0.8
COL9A3-202ENST00000452372 STAT4Q14765 748 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms