RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 STAT1P42224 750 aa10.99□□□□□ -0.65
USP1-204ENST00000452143 ZNF143P52747 638 aaPredicted RBP10.99□□□□□ -0.65
USP1-204ENST00000452143 SERINC3Q13530 473 aa10.99□□□□□ -0.65
USP1-204ENST00000452143 C1orf61Q13536 156 aa10.99□□□□□ -0.65
USP1-204ENST00000452143 NFATC4Q14934 902 aa10.99□□□□□ -0.65
USP1-204ENST00000452143 KRT31Q15323 416 aa10.99□□□□□ -0.65
USP1-204ENST00000452143 SYCP1Q15431 976 aa10.99□□□□□ -0.65
USP1-204ENST00000452143 UGP2Q16851 508 aa10.99□□□□□ -0.65
USP1-204ENST00000452143 CLEC16AQ2KHT3 1053 aa10.99□□□□□ -0.65
USP1-204ENST00000452143 CFAP58Q5T655 872 aa10.99□□□□□ -0.65
USP1-204ENST00000452143 ERAP2Q6P179 960 aa10.99□□□□□ -0.65
USP1-204ENST00000452143 BRAT1Q6PJG6 821 aa10.99□□□□□ -0.65
USP1-204ENST00000452143 MON1BQ7L1V2 547 aa10.99□□□□□ -0.65
USP1-204ENST00000452143 GKN2Q86XP6 184 aa10.99□□□□□ -0.65
USP1-204ENST00000452143 PCDH19Q8TAB3 1148 aa10.99□□□□□ -0.65
USP1-204ENST00000452143 ENOX1Q8TC92 643 aaKnown RBP10.99□□□□□ -0.65
USP1-204ENST00000452143 HMCESQ96FZ2 354 aa10.99□□□□□ -0.65
USP1-204ENST00000452143 ZNF641Q96N77 438 aaPredicted RBP10.99□□□□□ -0.65
USP1-204ENST00000452143 TUBGCP5Q96RT8 1024 aa10.99□□□□□ -0.65
USP1-204ENST00000452143 EDEM3Q9BZQ6 932 aa10.99□□□□□ -0.65
USP1-204ENST00000452143 NLRC4Q9NPP4 1024 aa10.99□□□□□ -0.65
USP1-204ENST00000452143 LHX3Q9UBR4 397 aa10.99□□□□□ -0.65
USP1-204ENST00000452143 ACSL6Q9UKU0 697 aa10.99□□□□□ -0.65
USP1-204ENST00000452143 PCDHGA7Q9Y5G6 932 aa10.99□□□□□ -0.65
USP1-204ENST00000452143 UNC13CQ8NB66 2214 aa10.99□□□□□ -0.65
USP1-204ENST00000452143 HECTD1Q9ULT8 2610 aa10.98□□□□□ -0.65
USP1-204ENST00000452143 CFAP69A5D8W1 941 aa10.98□□□□□ -0.65
USP1-204ENST00000452143 SIGLEC16A6NMB1 481 aa10.98□□□□□ -0.65
USP1-204ENST00000452143 EIF3CLB5ME19 914 aaKnown RBP10.98□□□□□ -0.65
USP1-204ENST00000452143 J3QKU1 62 aa10.98□□□□□ -0.65
USP1-204ENST00000452143 PLD2O14939 933 aa10.98□□□□□ -0.65
USP1-204ENST00000452143 CCP110O43303 1012 aa10.98□□□□□ -0.65
USP1-204ENST00000452143 TNFSF15O95150 251 aa10.98□□□□□ -0.65
USP1-204ENST00000452143 GJB6O95452 261 aa10.98□□□□□ -0.65
USP1-204ENST00000452143 CTSEP14091 401 aa10.98□□□□□ -0.65
USP1-204ENST00000452143 CCKBRP32239 447 aa10.98□□□□□ -0.65
USP1-204ENST00000452143 MMP12P39900 470 aa10.98□□□□□ -0.65
USP1-204ENST00000452143 KLK7P49862 253 aa10.98□□□□□ -0.65
USP1-204ENST00000452143 NDST2P52849 883 aa10.98□□□□□ -0.65
USP1-204ENST00000452143 CLN3Q13286 438 aa10.98□□□□□ -0.65
USP1-204ENST00000452143 MTM1Q13496 603 aa10.98□□□□□ -0.65
USP1-204ENST00000452143 ALG11Q2TAA5 492 aa10.98□□□□□ -0.65
USP1-204ENST00000452143 WSCD2Q2TBF2 565 aa10.98□□□□□ -0.65
USP1-204ENST00000452143 DNAJC24Q6P3W2 148 aa10.98□□□□□ -0.65
USP1-204ENST00000452143 FOXR1Q6PIV2 292 aa10.98□□□□□ -0.65
USP1-204ENST00000452143 WDR59Q6PJI9 974 aa10.98□□□□□ -0.65
USP1-204ENST00000452143 CCDC81Q6ZN84 652 aa10.98□□□□□ -0.65
USP1-204ENST00000452143 PHLDB2Q86SQ0 1253 aa10.98□□□□□ -0.65
USP1-204ENST00000452143 PYROXD2Q8N2H3 581 aa10.98□□□□□ -0.65
USP1-204ENST00000452143 KYQ8NBH2 561 aa10.98□□□□□ -0.65
USP1-204ENST00000452143 CCDC74AQ96AQ1 378 aa10.98□□□□□ -0.65
USP1-204ENST00000452143 MED8Q96G25 268 aa10.98□□□□□ -0.65
USP1-204ENST00000452143 EXOC2Q96KP1 924 aa10.98□□□□□ -0.65
USP1-204ENST00000452143 GFM1Q96RP9 751 aaKnown RBP10.98□□□□□ -0.65
USP1-204ENST00000452143 EIF3CQ99613 913 aaKnown RBP10.98□□□□□ -0.65
USP1-204ENST00000452143 CNPY3Q9BT09 278 aa10.98□□□□□ -0.65
USP1-204ENST00000452143 MAGEB5Q9BZ81 275 aa10.98□□□□□ -0.65
USP1-204ENST00000452143 STRADBQ9C0K7 418 aa10.98□□□□□ -0.65
USP1-204ENST00000452143 KLC2Q9H0B6 622 aa10.98□□□□□ -0.65
USP1-204ENST00000452143 VPS16Q9H269 839 aa10.98□□□□□ -0.65
USP1-204ENST00000452143 SUV39H2Q9H5I1 410 aa10.98□□□□□ -0.65
USP1-204ENST00000452143 SYNDIG1Q9H7V2 258 aa10.98□□□□□ -0.65
USP1-204ENST00000452143 PDFQ9HBH1 243 aa10.98□□□□□ -0.65
USP1-204ENST00000452143 PCDH12Q9NPG4 1184 aa10.98□□□□□ -0.65
USP1-204ENST00000452143 CHMP5Q9NZZ3 219 aa10.98□□□□□ -0.65
USP1-204ENST00000452143 UBA2Q9UBT2 640 aaPredicted RBP10.98□□□□□ -0.65
USP1-204ENST00000452143 KLQ9UEF7 1012 aa10.98□□□□□ -0.65
USP1-204ENST00000452143 ATXN7L1Q9ULK2 861 aaPredicted RBP10.98□□□□□ -0.65
USP1-204ENST00000452143 FZD10Q9ULW2 581 aa10.98□□□□□ -0.65
USP1-204ENST00000452143 SIK3Q9Y2K2 1263 aa10.98□□□□□ -0.65
USP1-204ENST00000452143 ATP8A1Q9Y2Q0 1164 aa10.98□□□□□ -0.65
USP1-204ENST00000452143 DGKBQ9Y6T7 804 aa10.98□□□□□ -0.65
USP1-204ENST00000452143 PTPN13Q12923 2485 aa10.97□□□□□ -0.65
USP1-204ENST00000452143 TCRBV5S1A1TA0A578 114 aa10.97□□□□□ -0.65
USP1-204ENST00000452143 PMS2P1A4D2B8 440 aa10.97□□□□□ -0.65
USP1-204ENST00000452143 EPHB6O15197 1021 aa10.97□□□□□ -0.65
USP1-204ENST00000452143 CREB3O43889 395 aa10.97□□□□□ -0.65
USP1-204ENST00000452143 PIGNO95427 931 aa10.97□□□□□ -0.65
USP1-204ENST00000452143 CELA2BP08218 269 aaPredicted RBP10.97□□□□□ -0.65
USP1-204ENST00000452143 PNLIPP16233 465 aa10.97□□□□□ -0.65
USP1-204ENST00000452143 KELP23276 732 aa10.97□□□□□ -0.65
USP1-204ENST00000452143 SERPINA4P29622 427 aa10.97□□□□□ -0.65
USP1-204ENST00000452143 LIG3P49916 1009 aa10.97□□□□□ -0.65
USP1-204ENST00000452143 INHBCP55103 352 aa10.97□□□□□ -0.65
USP1-204ENST00000452143 TPI1P60174 286 aa10.97□□□□□ -0.65
USP1-204ENST00000452143 SCYL2Q6P3W7 929 aa10.97□□□□□ -0.65
USP1-204ENST00000452143 RAB11FIP2Q7L804 512 aa10.97□□□□□ -0.65
USP1-204ENST00000452143 HID1Q8IV36 788 aa10.97□□□□□ -0.65
USP1-204ENST00000452143 NEK11Q8NG66 645 aa10.97□□□□□ -0.65
USP1-204ENST00000452143 TMEM159Q96B96 161 aa10.97□□□□□ -0.65
USP1-204ENST00000452143 WDR92Q96MX6 357 aa10.97□□□□□ -0.65
USP1-204ENST00000452143 TMEM74Q96NL1 305 aa10.97□□□□□ -0.65
USP1-204ENST00000452143 MCEEQ96PE7 176 aa10.97□□□□□ -0.65
USP1-204ENST00000452143 CCNL2Q96S94 520 aaPredicted RBP10.97□□□□□ -0.65
USP1-204ENST00000452143 RBM15Q96T37 977 aaKnown RBP eCLIP10.97□□□□□ -0.65
USP1-204ENST00000452143 PCDHB18PQ96TA0 734 aa10.97□□□□□ -0.65
USP1-204ENST00000452143 APOOQ9BUR5 198 aa10.97□□□□□ -0.65
USP1-204ENST00000452143 LRRC19Q9H756 370 aa10.97□□□□□ -0.65
USP1-204ENST00000452143 ATP13A3Q9H7F0 1226 aa10.97□□□□□ -0.65
USP1-204ENST00000452143 EPB41L5Q9HCM4 733 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms